Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16525 and AO353_16530 are separated by 17 nucleotides AO353_16530 and AO353_16535 are separated by 76 nucleotides
AO353_16525: AO353_16525 - lipid-A-disaccharide synthase, at 3,668,657 to 3,669,790
_16525
AO353_16530: AO353_16530 - ribonuclease HII, at 3,669,808 to 3,670,428
_16530
AO353_16535: AO353_16535 - DNA polymerase III subunit alpha, at 3,670,505 to 3,674,026
_16535
Position (kb)
3669
3670
3671 Strain fitness (log2 ratio)
-2
-1
0
1 at 3669.797 kb on + strand at 3669.797 kb on + strand at 3669.797 kb on + strand at 3669.797 kb on + strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.823 kb on - strand at 3669.989 kb on - strand, within AO353_16530 at 3670.062 kb on + strand, within AO353_16530 at 3670.063 kb on - strand, within AO353_16530 at 3670.396 kb on + strand at 3670.396 kb on + strand at 3670.396 kb on + strand at 3670.396 kb on + strand at 3670.397 kb on - strand at 3670.397 kb on - strand at 3670.397 kb on - strand at 3670.397 kb on - strand at 3670.397 kb on - strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.427 kb on - strand at 3670.427 kb on - strand at 3670.427 kb on - strand at 3670.427 kb on - strand at 3670.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 3,669,797 + -0.7 3,669,797 + +0.8 3,669,797 + -1.9 3,669,797 + -1.9 3,669,798 - -1.3 3,669,798 - -0.5 3,669,798 - +0.8 3,669,798 - +0.2 3,669,798 - -1.3 3,669,798 - +0.5 3,669,823 - +0.4 3,669,989 - AO353_16530 0.29 -1.3 3,670,062 + AO353_16530 0.41 -1.5 3,670,063 - AO353_16530 0.41 -1.5 3,670,396 + +1.1 3,670,396 + -0.7 3,670,396 + -0.7 3,670,396 + -0.7 3,670,397 - +0.2 3,670,397 - -0.3 3,670,397 - -0.3 3,670,397 - +0.6 3,670,397 - +0.7 3,670,426 + -1.3 3,670,426 + +0.1 3,670,426 + +0.7 3,670,426 + -0.3 3,670,426 + -0.3 3,670,426 + -1.3 3,670,426 + +0.1 3,670,427 - +0.7 3,670,427 - -1.2 3,670,427 - +0.4 3,670,427 - +0.5 3,670,461 - -0.4
Or see this region's nucleotide sequence