Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16370 and AO353_16375 are separated by 58 nucleotides AO353_16375 and AO353_16380 are separated by 663 nucleotides
AO353_16370: AO353_16370 - cell filamentation protein Fic, at 3,634,032 to 3,635,384
_16370
AO353_16375: AO353_16375 - hypothetical protein, at 3,635,443 to 3,635,817
_16375
AO353_16380: AO353_16380 - hypothetical protein, at 3,636,481 to 3,637,170
_16380
Position (kb)
3635
3636 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3634.542 kb on + strand, within AO353_16370 at 3634.542 kb on + strand, within AO353_16370 at 3634.542 kb on + strand, within AO353_16370 at 3634.542 kb on + strand, within AO353_16370 at 3634.542 kb on + strand, within AO353_16370 at 3634.647 kb on + strand, within AO353_16370 at 3634.647 kb on + strand, within AO353_16370 at 3634.648 kb on - strand, within AO353_16370 at 3634.648 kb on - strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.715 kb on + strand, within AO353_16370 at 3634.716 kb on - strand, within AO353_16370 at 3634.716 kb on - strand, within AO353_16370 at 3634.716 kb on - strand, within AO353_16370 at 3634.716 kb on - strand, within AO353_16370 at 3634.716 kb on - strand, within AO353_16370 at 3634.796 kb on - strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.806 kb on + strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.807 kb on - strand, within AO353_16370 at 3634.905 kb on + strand, within AO353_16370 at 3634.906 kb on - strand, within AO353_16370 at 3634.906 kb on - strand, within AO353_16370 at 3634.906 kb on - strand, within AO353_16370 at 3634.944 kb on + strand, within AO353_16370 at 3634.945 kb on - strand, within AO353_16370 at 3634.945 kb on - strand, within AO353_16370 at 3634.986 kb on + strand, within AO353_16370 at 3634.986 kb on + strand, within AO353_16370 at 3634.986 kb on + strand, within AO353_16370 at 3634.987 kb on - strand, within AO353_16370 at 3634.987 kb on - strand, within AO353_16370 at 3634.987 kb on - strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.998 kb on + strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3634.999 kb on - strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.034 kb on + strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.035 kb on - strand, within AO353_16370 at 3635.094 kb on + strand, within AO353_16370 at 3635.094 kb on + strand, within AO353_16370 at 3635.095 kb on - strand, within AO353_16370 at 3635.259 kb on + strand at 3635.259 kb on + strand at 3635.259 kb on + strand at 3635.259 kb on + strand at 3635.259 kb on + strand at 3635.260 kb on - strand at 3635.260 kb on - strand at 3635.260 kb on - strand at 3635.260 kb on - strand at 3635.382 kb on + strand at 3635.383 kb on - strand at 3635.383 kb on - strand at 3635.444 kb on + strand at 3635.444 kb on + strand at 3635.444 kb on + strand at 3635.445 kb on - strand at 3635.445 kb on - strand at 3635.445 kb on - strand at 3635.445 kb on - strand at 3635.614 kb on + strand, within AO353_16375 at 3635.615 kb on - strand, within AO353_16375 at 3635.615 kb on - strand, within AO353_16375 at 3635.705 kb on + strand, within AO353_16375 at 3635.706 kb on - strand, within AO353_16375 at 3635.836 kb on - strand at 3635.836 kb on - strand at 3635.850 kb on + strand at 3635.850 kb on + strand at 3635.867 kb on + strand at 3635.868 kb on - strand at 3636.065 kb on + strand at 3636.065 kb on + strand at 3636.107 kb on + strand at 3636.108 kb on - strand at 3636.114 kb on - strand at 3636.114 kb on - strand at 3636.166 kb on + strand at 3636.166 kb on + strand at 3636.166 kb on + strand at 3636.166 kb on + strand at 3636.167 kb on - strand at 3636.167 kb on - strand at 3636.167 kb on - strand at 3636.167 kb on - strand at 3636.203 kb on + strand at 3636.212 kb on + strand at 3636.236 kb on + strand at 3636.236 kb on + strand at 3636.237 kb on - strand at 3636.237 kb on - strand at 3636.355 kb on + strand at 3636.377 kb on + strand at 3636.378 kb on - strand at 3636.412 kb on + strand at 3636.412 kb on + strand at 3636.412 kb on + strand at 3636.412 kb on + strand at 3636.412 kb on + strand at 3636.412 kb on + strand at 3636.412 kb on + strand at 3636.413 kb on - strand at 3636.413 kb on - strand at 3636.421 kb on + strand at 3636.421 kb on + strand at 3636.438 kb on + strand at 3636.438 kb on + strand at 3636.439 kb on - strand at 3636.439 kb on - strand at 3636.439 kb on - strand at 3636.439 kb on - strand at 3636.439 kb on - strand at 3636.439 kb on - strand at 3636.482 kb on + strand at 3636.483 kb on - strand at 3636.483 kb on - strand at 3636.483 kb on - strand at 3636.602 kb on + strand, within AO353_16380 at 3636.602 kb on + strand, within AO353_16380 at 3636.603 kb on - strand, within AO353_16380 at 3636.603 kb on - strand, within AO353_16380 at 3636.671 kb on + strand, within AO353_16380 at 3636.671 kb on + strand, within AO353_16380 at 3636.671 kb on + strand, within AO353_16380 at 3636.671 kb on + strand, within AO353_16380 at 3636.672 kb on - strand, within AO353_16380 at 3636.672 kb on - strand, within AO353_16380 at 3636.672 kb on - strand, within AO353_16380 at 3636.761 kb on + strand, within AO353_16380 at 3636.780 kb on + strand, within AO353_16380
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 3,634,542 + AO353_16370 0.38 -0.1 3,634,542 + AO353_16370 0.38 -1.3 3,634,542 + AO353_16370 0.38 -0.2 3,634,542 + AO353_16370 0.38 +0.6 3,634,542 + AO353_16370 0.38 -1.4 3,634,647 + AO353_16370 0.45 -0.3 3,634,647 + AO353_16370 0.45 -1.3 3,634,648 - AO353_16370 0.46 +0.1 3,634,648 - AO353_16370 0.46 +0.5 3,634,715 + AO353_16370 0.50 +0.3 3,634,715 + AO353_16370 0.50 +0.1 3,634,715 + AO353_16370 0.50 -1.3 3,634,715 + AO353_16370 0.50 -0.4 3,634,715 + AO353_16370 0.50 +0.8 3,634,715 + AO353_16370 0.50 -1.5 3,634,715 + AO353_16370 0.50 +1.1 3,634,715 + AO353_16370 0.50 -0.8 3,634,715 + AO353_16370 0.50 -0.3 3,634,715 + AO353_16370 0.50 +3.1 3,634,715 + AO353_16370 0.50 +0.6 3,634,715 + AO353_16370 0.50 -2.9 3,634,716 - AO353_16370 0.51 -2.3 3,634,716 - AO353_16370 0.51 -0.7 3,634,716 - AO353_16370 0.51 -0.5 3,634,716 - AO353_16370 0.51 -0.1 3,634,716 - AO353_16370 0.51 -0.4 3,634,796 - AO353_16370 0.56 +2.4 3,634,806 + AO353_16370 0.57 -0.3 3,634,806 + AO353_16370 0.57 -0.1 3,634,806 + AO353_16370 0.57 -0.9 3,634,806 + AO353_16370 0.57 -1.9 3,634,806 + AO353_16370 0.57 -0.1 3,634,806 + AO353_16370 0.57 -1.5 3,634,806 + AO353_16370 0.57 -0.0 3,634,806 + AO353_16370 0.57 +0.2 3,634,806 + AO353_16370 0.57 +0.8 3,634,807 - AO353_16370 0.57 -1.3 3,634,807 - AO353_16370 0.57 -1.3 3,634,807 - AO353_16370 0.57 +0.5 3,634,807 - AO353_16370 0.57 -0.7 3,634,807 - AO353_16370 0.57 -0.9 3,634,807 - AO353_16370 0.57 -1.3 3,634,807 - AO353_16370 0.57 +1.1 3,634,807 - AO353_16370 0.57 -0.9 3,634,807 - AO353_16370 0.57 -1.4 3,634,905 + AO353_16370 0.65 -0.9 3,634,906 - AO353_16370 0.65 +0.1 3,634,906 - AO353_16370 0.65 -1.7 3,634,906 - AO353_16370 0.65 +0.5 3,634,944 + AO353_16370 0.67 -0.6 3,634,945 - AO353_16370 0.67 -0.3 3,634,945 - AO353_16370 0.67 -0.9 3,634,986 + AO353_16370 0.71 -1.5 3,634,986 + AO353_16370 0.71 +0.2 3,634,986 + AO353_16370 0.71 +1.5 3,634,987 - AO353_16370 0.71 -2.4 3,634,987 - AO353_16370 0.71 +1.9 3,634,987 - AO353_16370 0.71 -0.2 3,634,998 + AO353_16370 0.71 +0.1 3,634,998 + AO353_16370 0.71 +1.4 3,634,998 + AO353_16370 0.71 +0.6 3,634,998 + AO353_16370 0.71 +0.5 3,634,998 + AO353_16370 0.71 +0.5 3,634,998 + AO353_16370 0.71 +0.5 3,634,998 + AO353_16370 0.71 -1.3 3,634,998 + AO353_16370 0.71 -1.7 3,634,998 + AO353_16370 0.71 +1.3 3,634,998 + AO353_16370 0.71 +0.2 3,634,998 + AO353_16370 0.71 +0.3 3,634,999 - AO353_16370 0.71 +0.1 3,634,999 - AO353_16370 0.71 +0.5 3,634,999 - AO353_16370 0.71 -0.3 3,634,999 - AO353_16370 0.71 +0.3 3,634,999 - AO353_16370 0.71 -0.3 3,634,999 - AO353_16370 0.71 -0.4 3,634,999 - AO353_16370 0.71 +0.1 3,634,999 - AO353_16370 0.71 -0.9 3,634,999 - AO353_16370 0.71 -0.1 3,634,999 - AO353_16370 0.71 -2.1 3,634,999 - AO353_16370 0.71 +1.4 3,634,999 - AO353_16370 0.71 +0.2 3,634,999 - AO353_16370 0.71 +1.1 3,634,999 - AO353_16370 0.71 +1.1 3,634,999 - AO353_16370 0.71 -0.4 3,635,034 + AO353_16370 0.74 -2.2 3,635,034 + AO353_16370 0.74 +0.2 3,635,034 + AO353_16370 0.74 +0.1 3,635,034 + AO353_16370 0.74 -0.7 3,635,034 + AO353_16370 0.74 -0.6 3,635,034 + AO353_16370 0.74 -1.6 3,635,034 + AO353_16370 0.74 -1.1 3,635,034 + AO353_16370 0.74 +0.9 3,635,034 + AO353_16370 0.74 +2.2 3,635,034 + AO353_16370 0.74 -1.3 3,635,034 + AO353_16370 0.74 -0.4 3,635,034 + AO353_16370 0.74 +0.3 3,635,035 - AO353_16370 0.74 +0.3 3,635,035 - AO353_16370 0.74 -1.7 3,635,035 - AO353_16370 0.74 -0.1 3,635,035 - AO353_16370 0.74 -2.1 3,635,035 - AO353_16370 0.74 +0.7 3,635,035 - AO353_16370 0.74 +1.9 3,635,035 - AO353_16370 0.74 -0.9 3,635,035 - AO353_16370 0.74 -0.5 3,635,035 - AO353_16370 0.74 -1.8 3,635,035 - AO353_16370 0.74 -0.0 3,635,035 - AO353_16370 0.74 -0.4 3,635,035 - AO353_16370 0.74 -1.5 3,635,035 - AO353_16370 0.74 +1.9 3,635,035 - AO353_16370 0.74 +1.1 3,635,035 - AO353_16370 0.74 -2.3 3,635,035 - AO353_16370 0.74 +1.1 3,635,094 + AO353_16370 0.78 -1.5 3,635,094 + AO353_16370 0.78 +1.1 3,635,095 - AO353_16370 0.79 -0.1 3,635,259 + -0.3 3,635,259 + -1.2 3,635,259 + -0.0 3,635,259 + +1.1 3,635,259 + -2.3 3,635,260 - -1.7 3,635,260 - -0.7 3,635,260 - +2.9 3,635,260 - -0.7 3,635,382 + +0.1 3,635,383 - +0.4 3,635,383 - +1.9 3,635,444 + -0.2 3,635,444 + -2.1 3,635,444 + -1.4 3,635,445 - +0.3 3,635,445 - +0.8 3,635,445 - -0.6 3,635,445 - +2.7 3,635,614 + AO353_16375 0.46 -2.9 3,635,615 - AO353_16375 0.46 -1.7 3,635,615 - AO353_16375 0.46 -1.1 3,635,705 + AO353_16375 0.70 -1.0 3,635,706 - AO353_16375 0.70 -1.3 3,635,836 - +1.3 3,635,836 - -0.8 3,635,850 + -0.3 3,635,850 + -1.7 3,635,867 + -1.1 3,635,868 - +0.1 3,636,065 + -0.8 3,636,065 + -0.2 3,636,107 + -1.2 3,636,108 - +1.1 3,636,114 - +0.5 3,636,114 - +0.7 3,636,166 + +0.3 3,636,166 + -0.2 3,636,166 + -0.9 3,636,166 + -0.7 3,636,167 - +0.7 3,636,167 - +0.3 3,636,167 - -1.3 3,636,167 - +0.8 3,636,203 + +1.1 3,636,212 + +0.3 3,636,236 + -0.6 3,636,236 + +1.1 3,636,237 - -0.8 3,636,237 - +0.1 3,636,355 + -1.3 3,636,377 + -2.4 3,636,378 - -0.0 3,636,412 + +1.4 3,636,412 + -0.9 3,636,412 + -0.1 3,636,412 + -0.9 3,636,412 + +0.2 3,636,412 + +0.5 3,636,412 + -1.5 3,636,413 - +0.3 3,636,413 - -0.9 3,636,421 + -1.5 3,636,421 + +1.1 3,636,438 + -2.4 3,636,438 + -2.4 3,636,439 - -0.3 3,636,439 - +0.4 3,636,439 - +0.7 3,636,439 - -0.7 3,636,439 - +0.5 3,636,439 - +0.4 3,636,482 + +0.3 3,636,483 - +0.1 3,636,483 - -1.7 3,636,483 - -0.5 3,636,602 + AO353_16380 0.18 -0.9 3,636,602 + AO353_16380 0.18 -1.3 3,636,603 - AO353_16380 0.18 -0.5 3,636,603 - AO353_16380 0.18 +1.9 3,636,671 + AO353_16380 0.28 +1.6 3,636,671 + AO353_16380 0.28 -0.9 3,636,671 + AO353_16380 0.28 -1.7 3,636,671 + AO353_16380 0.28 -1.1 3,636,672 - AO353_16380 0.28 +0.5 3,636,672 - AO353_16380 0.28 -0.9 3,636,672 - AO353_16380 0.28 -1.2 3,636,761 + AO353_16380 0.41 -1.5 3,636,780 + AO353_16380 0.43 +1.4
Or see this region's nucleotide sequence