Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16020 and AO353_16025 are separated by 253 nucleotides AO353_16025 and AO353_16030 are separated by 2 nucleotides AO353_16030 and AO353_16035 are separated by 202 nucleotides
AO353_16020: AO353_16020 - tRNA (cmo5U34)-methyltransferase, at 3,540,794 to 3,541,537
_16020
AO353_16025: AO353_16025 - hypothetical protein, at 3,541,791 to 3,542,426
_16025
AO353_16030: AO353_16030 - peptidase inhibitor I42, at 3,542,429 to 3,542,821
_16030
AO353_16035: AO353_16035 - Lon protease, at 3,543,024 to 3,545,444
_16035
Position (kb)
3542
3543 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3541.613 kb on - strand at 3541.613 kb on - strand at 3541.613 kb on - strand at 3541.687 kb on + strand at 3541.687 kb on + strand at 3541.687 kb on + strand at 3541.687 kb on + strand at 3541.687 kb on + strand at 3541.688 kb on - strand at 3541.688 kb on - strand at 3541.688 kb on - strand at 3541.723 kb on + strand at 3541.723 kb on + strand at 3541.724 kb on - strand at 3541.724 kb on - strand at 3541.744 kb on - strand at 3541.744 kb on - strand at 3541.823 kb on + strand at 3541.823 kb on + strand at 3541.824 kb on - strand at 3541.824 kb on - strand at 3541.824 kb on - strand at 3541.846 kb on + strand at 3541.846 kb on + strand at 3541.846 kb on + strand at 3541.847 kb on - strand at 3541.847 kb on - strand at 3541.847 kb on - strand at 3541.847 kb on - strand at 3541.847 kb on - strand at 3541.865 kb on - strand, within AO353_16025 at 3541.865 kb on - strand, within AO353_16025 at 3542.030 kb on - strand, within AO353_16025 at 3542.114 kb on + strand, within AO353_16025 at 3542.114 kb on + strand, within AO353_16025 at 3542.115 kb on - strand, within AO353_16025 at 3542.152 kb on + strand, within AO353_16025 at 3542.152 kb on + strand, within AO353_16025 at 3542.152 kb on + strand, within AO353_16025 at 3542.153 kb on - strand, within AO353_16025 at 3542.153 kb on - strand, within AO353_16025 at 3542.164 kb on + strand, within AO353_16025 at 3542.164 kb on + strand, within AO353_16025 at 3542.164 kb on + strand, within AO353_16025 at 3542.165 kb on - strand, within AO353_16025 at 3542.380 kb on + strand at 3542.380 kb on + strand at 3542.496 kb on + strand, within AO353_16030 at 3542.496 kb on + strand, within AO353_16030 at 3542.496 kb on + strand, within AO353_16030 at 3542.496 kb on + strand, within AO353_16030 at 3542.496 kb on + strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.595 kb on + strand, within AO353_16030 at 3542.596 kb on - strand, within AO353_16030 at 3542.974 kb on + strand at 3542.974 kb on + strand at 3542.975 kb on - strand at 3542.975 kb on - strand at 3543.005 kb on + strand at 3543.005 kb on + strand at 3543.005 kb on + strand at 3543.014 kb on + strand at 3543.014 kb on + strand at 3543.014 kb on + strand at 3543.015 kb on - strand at 3543.015 kb on - strand at 3543.074 kb on + strand at 3543.075 kb on - strand at 3543.092 kb on - strand at 3543.092 kb on - strand at 3543.122 kb on + strand at 3543.123 kb on - strand at 3543.123 kb on - strand at 3543.294 kb on + strand, within AO353_16035 at 3543.336 kb on + strand, within AO353_16035 at 3543.336 kb on + strand, within AO353_16035 at 3543.337 kb on - strand, within AO353_16035 at 3543.337 kb on - strand, within AO353_16035 at 3543.337 kb on - strand, within AO353_16035 at 3543.337 kb on - strand, within AO353_16035 at 3543.337 kb on - strand, within AO353_16035 at 3543.409 kb on + strand, within AO353_16035 at 3543.409 kb on + strand, within AO353_16035 at 3543.409 kb on + strand, within AO353_16035 at 3543.409 kb on + strand, within AO353_16035 at 3543.409 kb on + strand, within AO353_16035 at 3543.409 kb on + strand, within AO353_16035 at 3543.409 kb on + strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.410 kb on - strand, within AO353_16035 at 3543.416 kb on - strand, within AO353_16035 at 3543.711 kb on + strand, within AO353_16035 at 3543.731 kb on - strand, within AO353_16035
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 3,541,613 - -1.7 3,541,613 - -2.3 3,541,613 - -0.2 3,541,687 + -0.5 3,541,687 + -0.5 3,541,687 + +0.5 3,541,687 + +0.1 3,541,687 + +0.4 3,541,688 - -1.3 3,541,688 - +0.9 3,541,688 - -2.1 3,541,723 + +0.1 3,541,723 + -0.6 3,541,724 - +0.1 3,541,724 - +0.4 3,541,744 - +0.1 3,541,744 - +0.6 3,541,823 + -0.3 3,541,823 + -0.2 3,541,824 - -0.7 3,541,824 - -1.9 3,541,824 - +3.7 3,541,846 + -1.9 3,541,846 + +0.5 3,541,846 + +0.5 3,541,847 - +1.1 3,541,847 - -2.4 3,541,847 - +1.3 3,541,847 - -0.1 3,541,847 - +0.1 3,541,865 - AO353_16025 0.12 -1.5 3,541,865 - AO353_16025 0.12 +0.8 3,542,030 - AO353_16025 0.38 -0.9 3,542,114 + AO353_16025 0.51 -1.8 3,542,114 + AO353_16025 0.51 +2.1 3,542,115 - AO353_16025 0.51 +1.1 3,542,152 + AO353_16025 0.57 +1.1 3,542,152 + AO353_16025 0.57 +1.9 3,542,152 + AO353_16025 0.57 -0.5 3,542,153 - AO353_16025 0.57 +2.1 3,542,153 - AO353_16025 0.57 +1.3 3,542,164 + AO353_16025 0.59 -0.3 3,542,164 + AO353_16025 0.59 +0.7 3,542,164 + AO353_16025 0.59 -0.7 3,542,165 - AO353_16025 0.59 -2.0 3,542,380 + -2.5 3,542,380 + -0.9 3,542,496 + AO353_16030 0.17 -0.5 3,542,496 + AO353_16030 0.17 +0.5 3,542,496 + AO353_16030 0.17 -1.5 3,542,496 + AO353_16030 0.17 -0.9 3,542,496 + AO353_16030 0.17 +0.7 3,542,497 - AO353_16030 0.17 +2.2 3,542,497 - AO353_16030 0.17 -0.1 3,542,497 - AO353_16030 0.17 +0.5 3,542,497 - AO353_16030 0.17 -0.3 3,542,497 - AO353_16030 0.17 +0.8 3,542,497 - AO353_16030 0.17 -0.7 3,542,595 + AO353_16030 0.42 +0.6 3,542,596 - AO353_16030 0.42 +0.7 3,542,974 + -1.9 3,542,974 + -0.5 3,542,975 - -0.5 3,542,975 - +0.2 3,543,005 + -1.3 3,543,005 + -1.3 3,543,005 + -1.3 3,543,014 + -1.3 3,543,014 + +0.3 3,543,014 + +0.5 3,543,015 - +1.1 3,543,015 - -0.3 3,543,074 + -1.6 3,543,075 - -1.0 3,543,092 - -0.5 3,543,092 - -2.1 3,543,122 + +0.1 3,543,123 - +1.4 3,543,123 - -1.9 3,543,294 + AO353_16035 0.11 -0.8 3,543,336 + AO353_16035 0.13 -1.1 3,543,336 + AO353_16035 0.13 -1.6 3,543,337 - AO353_16035 0.13 -2.2 3,543,337 - AO353_16035 0.13 -2.3 3,543,337 - AO353_16035 0.13 -0.7 3,543,337 - AO353_16035 0.13 -0.5 3,543,337 - AO353_16035 0.13 -0.5 3,543,409 + AO353_16035 0.16 +0.1 3,543,409 + AO353_16035 0.16 -0.5 3,543,409 + AO353_16035 0.16 -0.7 3,543,409 + AO353_16035 0.16 -1.7 3,543,409 + AO353_16035 0.16 +0.8 3,543,409 + AO353_16035 0.16 -0.3 3,543,409 + AO353_16035 0.16 -2.3 3,543,410 - AO353_16035 0.16 +0.3 3,543,410 - AO353_16035 0.16 +2.7 3,543,410 - AO353_16035 0.16 -0.7 3,543,410 - AO353_16035 0.16 -0.9 3,543,410 - AO353_16035 0.16 +2.1 3,543,410 - AO353_16035 0.16 -0.5 3,543,410 - AO353_16035 0.16 -0.4 3,543,410 - AO353_16035 0.16 -3.0 3,543,410 - AO353_16035 0.16 -1.5 3,543,416 - AO353_16035 0.16 +0.1 3,543,711 + AO353_16035 0.28 -1.4 3,543,731 - AO353_16035 0.29 -2.6
Or see this region's nucleotide sequence