Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14575 and AO353_14580 are separated by 218 nucleotides AO353_14580 and AO353_14585 overlap by 8 nucleotides AO353_14585 and AO353_14590 are separated by 159 nucleotides AO353_14590 and AO353_14595 are separated by 150 nucleotides
AO353_14575: AO353_14575 - hypothetical protein, at 3,231,857 to 3,233,134
_14575
AO353_14580: AO353_14580 - energy transducer TonB, at 3,233,353 to 3,234,099
_14580
AO353_14585: AO353_14585 - ribosomal-protein-alanine acetyltransferase, at 3,234,092 to 3,234,544
_14585
AO353_14590: AO353_14590 - serine kinase/phosphatase, at 3,234,704 to 3,235,105
_14590
AO353_14595: AO353_14595 - carbonate dehydratase, at 3,235,256 to 3,235,900
_14595
Position (kb)
3234
3235 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3233.174 kb on + strand at 3233.174 kb on + strand at 3233.174 kb on + strand at 3233.174 kb on + strand at 3233.175 kb on - strand at 3233.175 kb on - strand at 3233.236 kb on + strand at 3233.237 kb on - strand at 3233.273 kb on + strand at 3234.105 kb on + strand at 3234.144 kb on + strand, within AO353_14585 at 3234.158 kb on + strand, within AO353_14585 at 3234.215 kb on + strand, within AO353_14585 at 3234.215 kb on + strand, within AO353_14585 at 3234.216 kb on - strand, within AO353_14585 at 3234.216 kb on - strand, within AO353_14585 at 3234.374 kb on + strand, within AO353_14585 at 3234.374 kb on + strand, within AO353_14585 at 3234.375 kb on - strand, within AO353_14585 at 3234.375 kb on - strand, within AO353_14585 at 3234.440 kb on + strand, within AO353_14585 at 3234.440 kb on + strand, within AO353_14585 at 3234.440 kb on + strand, within AO353_14585 at 3234.441 kb on - strand, within AO353_14585 at 3234.441 kb on - strand, within AO353_14585 at 3234.441 kb on - strand, within AO353_14585 at 3234.441 kb on - strand at 3234.441 kb on - strand, within AO353_14585 at 3234.441 kb on - strand, within AO353_14585 at 3234.482 kb on + strand, within AO353_14585 at 3234.482 kb on + strand, within AO353_14585 at 3234.483 kb on - strand, within AO353_14585 at 3234.483 kb on - strand, within AO353_14585 at 3234.483 kb on - strand, within AO353_14585 at 3234.483 kb on - strand, within AO353_14585 at 3234.485 kb on + strand, within AO353_14585 at 3234.601 kb on - strand at 3234.610 kb on + strand at 3234.610 kb on + strand at 3234.610 kb on + strand at 3234.611 kb on - strand at 3234.638 kb on - strand at 3234.932 kb on + strand, within AO353_14590 at 3234.932 kb on + strand, within AO353_14590 at 3234.933 kb on - strand, within AO353_14590 at 3235.084 kb on - strand at 3235.084 kb on - strand at 3235.118 kb on + strand at 3235.118 kb on + strand at 3235.118 kb on + strand at 3235.118 kb on + strand at 3235.119 kb on - strand at 3235.119 kb on - strand at 3235.119 kb on - strand at 3235.119 kb on - strand at 3235.131 kb on + strand at 3235.132 kb on - strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.156 kb on - strand at 3235.266 kb on + strand at 3235.282 kb on + strand at 3235.283 kb on - strand at 3235.283 kb on - strand at 3235.283 kb on - strand at 3235.364 kb on + strand, within AO353_14595 at 3235.364 kb on + strand, within AO353_14595 at 3235.364 kb on + strand, within AO353_14595 at 3235.364 kb on + strand, within AO353_14595 at 3235.364 kb on + strand, within AO353_14595 at 3235.365 kb on - strand, within AO353_14595 at 3235.365 kb on - strand, within AO353_14595 at 3235.365 kb on - strand, within AO353_14595 at 3235.440 kb on + strand, within AO353_14595 at 3235.440 kb on + strand, within AO353_14595 at 3235.440 kb on + strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.481 kb on - strand, within AO353_14595 at 3235.481 kb on - strand, within AO353_14595
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 3,233,174 + +0.0 3,233,174 + -0.9 3,233,174 + -1.9 3,233,174 + +1.5 3,233,175 - -0.2 3,233,175 - +1.7 3,233,236 + -1.2 3,233,237 - -0.4 3,233,273 + -2.4 3,234,105 + -0.6 3,234,144 + AO353_14585 0.11 +1.5 3,234,158 + AO353_14585 0.15 -1.1 3,234,215 + AO353_14585 0.27 -1.9 3,234,215 + AO353_14585 0.27 +1.3 3,234,216 - AO353_14585 0.27 -0.7 3,234,216 - AO353_14585 0.27 +0.3 3,234,374 + AO353_14585 0.62 -0.7 3,234,374 + AO353_14585 0.62 -0.1 3,234,375 - AO353_14585 0.62 -2.3 3,234,375 - AO353_14585 0.62 -1.2 3,234,440 + AO353_14585 0.77 -1.5 3,234,440 + AO353_14585 0.77 -0.7 3,234,440 + AO353_14585 0.77 -1.1 3,234,441 - AO353_14585 0.77 -0.7 3,234,441 - AO353_14585 0.77 -0.5 3,234,441 - AO353_14585 0.77 -0.3 3,234,441 - +1.3 3,234,441 - AO353_14585 0.77 -2.1 3,234,441 - AO353_14585 0.77 -0.3 3,234,482 + AO353_14585 0.86 -0.3 3,234,482 + AO353_14585 0.86 -0.3 3,234,483 - AO353_14585 0.86 -1.1 3,234,483 - AO353_14585 0.86 +2.3 3,234,483 - AO353_14585 0.86 +2.3 3,234,483 - AO353_14585 0.86 -1.9 3,234,485 + AO353_14585 0.87 -0.9 3,234,601 - -0.9 3,234,610 + -2.4 3,234,610 + -1.1 3,234,610 + +0.4 3,234,611 - -1.2 3,234,638 - -0.2 3,234,932 + AO353_14590 0.57 -0.7 3,234,932 + AO353_14590 0.57 +0.1 3,234,933 - AO353_14590 0.57 +0.1 3,235,084 - +1.3 3,235,084 - -2.6 3,235,118 + +0.1 3,235,118 + +1.3 3,235,118 + +1.3 3,235,118 + -1.9 3,235,119 - -1.2 3,235,119 - -0.5 3,235,119 - -1.9 3,235,119 - -1.6 3,235,131 + -1.7 3,235,132 - +0.9 3,235,133 + -1.2 3,235,133 + +1.3 3,235,133 + +1.1 3,235,133 + +0.5 3,235,133 + -0.5 3,235,133 + -0.3 3,235,133 + +1.5 3,235,133 + -0.7 3,235,133 + +0.0 3,235,133 + -0.7 3,235,133 + +1.3 3,235,134 - +0.9 3,235,134 - -0.5 3,235,134 - -1.5 3,235,134 - +2.3 3,235,134 - +0.3 3,235,134 - +0.4 3,235,134 - -0.1 3,235,134 - -2.7 3,235,134 - -1.1 3,235,134 - -0.0 3,235,156 - +1.1 3,235,266 + +0.7 3,235,282 + -0.3 3,235,283 - +1.6 3,235,283 - +1.3 3,235,283 - -1.5 3,235,364 + AO353_14595 0.17 +0.4 3,235,364 + AO353_14595 0.17 -1.1 3,235,364 + AO353_14595 0.17 +1.5 3,235,364 + AO353_14595 0.17 -0.5 3,235,364 + AO353_14595 0.17 +2.7 3,235,365 - AO353_14595 0.17 +0.3 3,235,365 - AO353_14595 0.17 +0.2 3,235,365 - AO353_14595 0.17 -0.7 3,235,440 + AO353_14595 0.29 +0.8 3,235,440 + AO353_14595 0.29 +1.8 3,235,440 + AO353_14595 0.29 +1.0 3,235,441 - AO353_14595 0.29 -0.7 3,235,441 - AO353_14595 0.29 +1.5 3,235,441 - AO353_14595 0.29 -0.4 3,235,441 - AO353_14595 0.29 -1.3 3,235,441 - AO353_14595 0.29 -1.3 3,235,441 - AO353_14595 0.29 +1.5 3,235,441 - AO353_14595 0.29 -0.6 3,235,480 + AO353_14595 0.35 -1.8 3,235,480 + AO353_14595 0.35 +0.6 3,235,480 + AO353_14595 0.35 -0.2 3,235,480 + AO353_14595 0.35 +1.4 3,235,480 + AO353_14595 0.35 -0.7 3,235,481 - AO353_14595 0.35 -0.9 3,235,481 - AO353_14595 0.35 +0.1
Or see this region's nucleotide sequence