Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13570 and AO353_13575 are separated by 89 nucleotides AO353_13575 and AO353_13580 are separated by 54 nucleotides AO353_13580 and AO353_13585 are separated by 47 nucleotides AO353_13585 and AO353_13590 are separated by 546 nucleotides
AO353_13570: AO353_13570 - TonB-dependent receptor, at 3,013,006 to 3,015,135
_13570
AO353_13575: AO353_13575 - hypothetical protein, at 3,015,225 to 3,015,644
_13575
AO353_13580: AO353_13580 - copper resistance protein CopZ, at 3,015,699 to 3,016,178
_13580
AO353_13585: AO353_13585 - predicted copper homeostasis protein (from data) , at 3,016,226 to 3,016,627
_13585
AO353_13590: AO353_13590 - cobalt-precorrin-6X reductase, at 3,017,174 to 3,017,896
_13590
Position (kb)
3015
3016
3017 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3014.702 kb on + strand, within AO353_13570 at 3014.702 kb on + strand, within AO353_13570 at 3014.702 kb on + strand, within AO353_13570 at 3014.703 kb on - strand, within AO353_13570 at 3014.859 kb on - strand, within AO353_13570 at 3014.859 kb on - strand, within AO353_13570 at 3015.135 kb on + strand at 3015.135 kb on + strand at 3015.135 kb on + strand at 3015.136 kb on - strand at 3015.136 kb on - strand at 3015.136 kb on - strand at 3015.195 kb on - strand at 3015.195 kb on - strand at 3015.195 kb on - strand at 3015.195 kb on - strand at 3015.206 kb on + strand at 3015.213 kb on - strand at 3015.213 kb on - strand at 3015.267 kb on + strand, within AO353_13575 at 3015.267 kb on + strand, within AO353_13575 at 3015.267 kb on + strand, within AO353_13575 at 3015.268 kb on - strand, within AO353_13575 at 3015.268 kb on - strand, within AO353_13575 at 3015.392 kb on - strand, within AO353_13575 at 3015.518 kb on + strand, within AO353_13575 at 3015.519 kb on - strand, within AO353_13575 at 3015.572 kb on + strand, within AO353_13575 at 3015.609 kb on - strand at 3015.859 kb on + strand, within AO353_13580 at 3016.037 kb on - strand, within AO353_13580 at 3016.037 kb on - strand, within AO353_13580 at 3016.066 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.112 kb on - strand, within AO353_13580 at 3016.199 kb on - strand at 3016.199 kb on - strand at 3016.199 kb on - strand at 3016.335 kb on + strand, within AO353_13585 at 3016.335 kb on + strand, within AO353_13585 at 3016.335 kb on + strand, within AO353_13585 at 3016.336 kb on - strand, within AO353_13585 at 3016.336 kb on - strand, within AO353_13585 at 3016.336 kb on - strand, within AO353_13585 at 3016.336 kb on - strand, within AO353_13585 at 3016.336 kb on - strand, within AO353_13585 at 3016.406 kb on - strand, within AO353_13585 at 3016.406 kb on - strand, within AO353_13585 at 3016.406 kb on - strand, within AO353_13585 at 3016.406 kb on - strand, within AO353_13585 at 3016.406 kb on - strand, within AO353_13585 at 3016.406 kb on - strand, within AO353_13585 at 3016.406 kb on - strand, within AO353_13585 at 3016.571 kb on - strand, within AO353_13585 at 3016.571 kb on - strand, within AO353_13585 at 3016.571 kb on - strand, within AO353_13585 at 3016.667 kb on + strand at 3016.667 kb on + strand at 3016.668 kb on - strand at 3016.668 kb on - strand at 3016.668 kb on - strand at 3016.668 kb on - strand at 3016.686 kb on - strand at 3016.686 kb on - strand at 3016.686 kb on - strand at 3016.689 kb on + strand at 3016.690 kb on - strand at 3016.798 kb on + strand at 3016.798 kb on + strand at 3016.798 kb on + strand at 3016.845 kb on + strand at 3016.845 kb on + strand at 3016.845 kb on + strand at 3016.845 kb on + strand at 3016.845 kb on + strand at 3016.845 kb on + strand at 3016.845 kb on + strand at 3016.845 kb on + strand at 3016.846 kb on - strand at 3016.846 kb on - strand at 3016.846 kb on - strand at 3016.846 kb on - strand at 3016.846 kb on - strand at 3016.872 kb on + strand at 3016.939 kb on + strand at 3016.939 kb on + strand at 3016.939 kb on + strand at 3016.939 kb on + strand at 3016.939 kb on + strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.940 kb on - strand at 3016.941 kb on + strand at 3016.941 kb on + strand at 3016.941 kb on + strand at 3016.942 kb on - strand at 3016.942 kb on - strand at 3016.942 kb on - strand at 3016.942 kb on - strand at 3016.980 kb on + strand at 3016.980 kb on + strand at 3017.006 kb on + strand at 3017.006 kb on + strand at 3017.007 kb on - strand at 3017.034 kb on + strand at 3017.034 kb on + strand at 3017.035 kb on - strand at 3017.035 kb on - strand at 3017.094 kb on - strand at 3017.094 kb on - strand at 3017.094 kb on - strand at 3017.107 kb on + strand at 3017.107 kb on + strand at 3017.107 kb on + strand at 3017.108 kb on - strand at 3017.108 kb on - strand at 3017.108 kb on - strand at 3017.108 kb on - strand at 3017.159 kb on + strand at 3017.160 kb on - strand at 3017.167 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 3,014,702 + AO353_13570 0.80 +0.1 3,014,702 + AO353_13570 0.80 +0.4 3,014,702 + AO353_13570 0.80 -0.2 3,014,703 - AO353_13570 0.80 -0.4 3,014,859 - AO353_13570 0.87 +1.6 3,014,859 - AO353_13570 0.87 -0.2 3,015,135 + -0.3 3,015,135 + +0.9 3,015,135 + +0.8 3,015,136 - -1.2 3,015,136 - -1.2 3,015,136 - +1.8 3,015,195 - +0.4 3,015,195 - -2.3 3,015,195 - +2.2 3,015,195 - +0.4 3,015,206 + +2.0 3,015,213 - +2.4 3,015,213 - -1.2 3,015,267 + AO353_13575 0.10 +0.4 3,015,267 + AO353_13575 0.10 +0.5 3,015,267 + AO353_13575 0.10 -0.6 3,015,268 - AO353_13575 0.10 -2.7 3,015,268 - AO353_13575 0.10 -1.8 3,015,392 - AO353_13575 0.40 -2.1 3,015,518 + AO353_13575 0.70 -0.6 3,015,519 - AO353_13575 0.70 -0.5 3,015,572 + AO353_13575 0.83 -1.5 3,015,609 - -0.4 3,015,859 + AO353_13580 0.33 +0.8 3,016,037 - AO353_13580 0.70 -0.2 3,016,037 - AO353_13580 0.70 -1.6 3,016,066 - AO353_13580 0.76 -1.1 3,016,112 - AO353_13580 0.86 +1.8 3,016,112 - AO353_13580 0.86 -2.0 3,016,112 - AO353_13580 0.86 +0.4 3,016,112 - AO353_13580 0.86 -1.9 3,016,112 - AO353_13580 0.86 +1.0 3,016,112 - AO353_13580 0.86 +1.0 3,016,112 - AO353_13580 0.86 -2.3 3,016,112 - AO353_13580 0.86 -1.6 3,016,112 - AO353_13580 0.86 -1.1 3,016,199 - +0.0 3,016,199 - +1.5 3,016,199 - +0.4 3,016,335 + AO353_13585 0.27 -0.6 3,016,335 + AO353_13585 0.27 +1.2 3,016,335 + AO353_13585 0.27 +0.8 3,016,336 - AO353_13585 0.27 -1.5 3,016,336 - AO353_13585 0.27 +1.1 3,016,336 - AO353_13585 0.27 -0.3 3,016,336 - AO353_13585 0.27 +0.9 3,016,336 - AO353_13585 0.27 +0.4 3,016,406 - AO353_13585 0.45 +0.8 3,016,406 - AO353_13585 0.45 -0.8 3,016,406 - AO353_13585 0.45 +0.4 3,016,406 - AO353_13585 0.45 +1.1 3,016,406 - AO353_13585 0.45 +0.5 3,016,406 - AO353_13585 0.45 -0.2 3,016,406 - AO353_13585 0.45 +0.7 3,016,571 - AO353_13585 0.86 +0.8 3,016,571 - AO353_13585 0.86 -0.6 3,016,571 - AO353_13585 0.86 +0.2 3,016,667 + -1.6 3,016,667 + -2.0 3,016,668 - +1.7 3,016,668 - +1.5 3,016,668 - +0.4 3,016,668 - -0.5 3,016,686 - -0.4 3,016,686 - -0.6 3,016,686 - -0.2 3,016,689 + -1.2 3,016,690 - +1.4 3,016,798 + -1.8 3,016,798 + +1.4 3,016,798 + -1.2 3,016,845 + +0.8 3,016,845 + +0.1 3,016,845 + -0.3 3,016,845 + +1.4 3,016,845 + -1.6 3,016,845 + -1.0 3,016,845 + -0.6 3,016,845 + -0.3 3,016,846 - -0.2 3,016,846 - -1.0 3,016,846 - -0.6 3,016,846 - +3.2 3,016,846 - -0.0 3,016,872 + +1.6 3,016,939 + +2.4 3,016,939 + +0.5 3,016,939 + -0.2 3,016,939 + -2.2 3,016,939 + -0.0 3,016,940 - -0.1 3,016,940 - -0.2 3,016,940 - -0.5 3,016,940 - -0.1 3,016,940 - -1.0 3,016,940 - -2.1 3,016,940 - -1.2 3,016,940 - -0.2 3,016,940 - +0.0 3,016,940 - -1.2 3,016,941 + +0.6 3,016,941 + +0.5 3,016,941 + -1.5 3,016,942 - -0.2 3,016,942 - -2.6 3,016,942 - +0.4 3,016,942 - -0.1 3,016,980 + +2.2 3,016,980 + +2.9 3,017,006 + +0.2 3,017,006 + +0.4 3,017,007 - -0.1 3,017,034 + -1.5 3,017,034 + -0.2 3,017,035 - -2.0 3,017,035 - -1.0 3,017,094 - -1.0 3,017,094 - -1.8 3,017,094 - +1.7 3,017,107 + -1.0 3,017,107 + -0.5 3,017,107 + +2.4 3,017,108 - +0.6 3,017,108 - +0.9 3,017,108 - +0.0 3,017,108 - -1.0 3,017,159 + +0.4 3,017,160 - -2.1 3,017,167 + +0.4
Or see this region's nucleotide sequence