Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09830 and AO353_09835 are separated by 34 nucleotides AO353_09835 and AO353_09840 are separated by 201 nucleotides AO353_09840 and AO353_09845 overlap by 1 nucleotides
AO353_09830: AO353_09830 - pyridine nucleotide-disulfide oxidoreductase, at 2,147,402 to 2,148,550
_09830
AO353_09835: AO353_09835 - rubredoxin, at 2,148,585 to 2,148,755
_09835
AO353_09840: AO353_09840 - chorismate--pyruvate lyase, at 2,148,957 to 2,149,520
_09840
AO353_09845: AO353_09845 - 4-hydroxybenzoate octaprenyltransferase, at 2,149,520 to 2,150,410
_09845
Position (kb)
2148
2149 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2147.622 kb on + strand, within AO353_09830 at 2147.622 kb on + strand, within AO353_09830 at 2147.694 kb on + strand, within AO353_09830 at 2147.694 kb on + strand, within AO353_09830 at 2147.694 kb on + strand, within AO353_09830 at 2147.694 kb on + strand, within AO353_09830 at 2147.694 kb on + strand, within AO353_09830 at 2147.694 kb on + strand, within AO353_09830 at 2147.694 kb on + strand, within AO353_09830 at 2147.694 kb on + strand, within AO353_09830 at 2147.695 kb on - strand, within AO353_09830 at 2147.695 kb on - strand, within AO353_09830 at 2147.695 kb on - strand, within AO353_09830 at 2147.695 kb on - strand, within AO353_09830 at 2147.739 kb on + strand, within AO353_09830 at 2147.739 kb on + strand, within AO353_09830 at 2147.739 kb on + strand, within AO353_09830 at 2147.739 kb on + strand, within AO353_09830 at 2147.739 kb on + strand, within AO353_09830 at 2147.739 kb on + strand, within AO353_09830 at 2147.739 kb on + strand, within AO353_09830 at 2147.739 kb on + strand, within AO353_09830 at 2147.740 kb on - strand, within AO353_09830 at 2147.740 kb on - strand, within AO353_09830 at 2147.740 kb on - strand, within AO353_09830 at 2147.740 kb on - strand, within AO353_09830 at 2147.740 kb on - strand, within AO353_09830 at 2147.740 kb on - strand, within AO353_09830 at 2147.740 kb on - strand, within AO353_09830 at 2147.740 kb on - strand, within AO353_09830 at 2147.743 kb on + strand, within AO353_09830 at 2147.743 kb on + strand, within AO353_09830 at 2147.743 kb on + strand, within AO353_09830 at 2147.743 kb on + strand, within AO353_09830 at 2147.743 kb on + strand, within AO353_09830 at 2147.743 kb on + strand, within AO353_09830 at 2147.743 kb on + strand, within AO353_09830 at 2147.744 kb on - strand, within AO353_09830 at 2147.744 kb on - strand, within AO353_09830 at 2147.744 kb on - strand, within AO353_09830 at 2147.744 kb on - strand, within AO353_09830 at 2147.744 kb on - strand, within AO353_09830 at 2147.744 kb on - strand, within AO353_09830 at 2147.744 kb on - strand, within AO353_09830 at 2147.923 kb on + strand, within AO353_09830 at 2147.923 kb on + strand, within AO353_09830 at 2147.923 kb on + strand, within AO353_09830 at 2147.923 kb on + strand, within AO353_09830 at 2147.923 kb on + strand, within AO353_09830 at 2148.153 kb on + strand, within AO353_09830 at 2148.153 kb on + strand, within AO353_09830 at 2148.153 kb on + strand, within AO353_09830 at 2148.317 kb on - strand, within AO353_09830 at 2148.429 kb on + strand, within AO353_09830 at 2148.429 kb on + strand, within AO353_09830 at 2148.429 kb on + strand, within AO353_09830 at 2148.430 kb on - strand, within AO353_09830 at 2148.430 kb on - strand, within AO353_09830 at 2148.430 kb on - strand, within AO353_09830 at 2148.430 kb on - strand, within AO353_09830 at 2148.507 kb on + strand at 2148.508 kb on - strand at 2148.508 kb on - strand at 2148.508 kb on - strand at 2148.508 kb on - strand at 2148.508 kb on - strand at 2148.508 kb on - strand at 2148.555 kb on + strand at 2148.556 kb on - strand at 2148.556 kb on - strand at 2148.556 kb on - strand at 2148.718 kb on + strand, within AO353_09835 at 2148.718 kb on + strand, within AO353_09835 at 2148.718 kb on + strand, within AO353_09835 at 2148.718 kb on + strand, within AO353_09835 at 2148.718 kb on + strand, within AO353_09835 at 2148.718 kb on + strand, within AO353_09835 at 2148.718 kb on + strand, within AO353_09835 at 2148.719 kb on - strand, within AO353_09835 at 2148.719 kb on - strand, within AO353_09835 at 2148.719 kb on - strand, within AO353_09835 at 2148.756 kb on + strand at 2148.756 kb on + strand at 2148.756 kb on + strand at 2148.757 kb on - strand at 2148.757 kb on - strand at 2148.785 kb on - strand at 2148.839 kb on + strand at 2148.881 kb on - strand at 2148.918 kb on + strand at 2148.919 kb on - strand at 2148.945 kb on + strand at 2149.203 kb on + strand, within AO353_09840 at 2149.203 kb on + strand, within AO353_09840 at 2149.203 kb on + strand, within AO353_09840 at 2149.203 kb on + strand, within AO353_09840 at 2149.203 kb on + strand, within AO353_09840 at 2149.203 kb on + strand, within AO353_09840 at 2149.203 kb on + strand, within AO353_09840 at 2149.203 kb on + strand, within AO353_09840 at 2149.203 kb on + strand, within AO353_09840 at 2149.204 kb on - strand, within AO353_09840 at 2149.204 kb on - strand, within AO353_09840 at 2149.204 kb on - strand, within AO353_09840 at 2149.204 kb on - strand, within AO353_09840 at 2149.204 kb on - strand, within AO353_09840 at 2149.204 kb on - strand, within AO353_09840 at 2149.204 kb on - strand, within AO353_09840 at 2149.204 kb on - strand, within AO353_09840 at 2149.283 kb on + strand, within AO353_09840 at 2149.284 kb on - strand, within AO353_09840 at 2149.284 kb on - strand, within AO353_09840 at 2149.368 kb on + strand, within AO353_09840 at 2149.468 kb on + strand at 2149.468 kb on + strand at 2149.468 kb on + strand at 2149.468 kb on + strand at 2149.468 kb on + strand at 2149.469 kb on - strand at 2149.469 kb on - strand at 2149.523 kb on + strand at 2149.523 kb on + strand at 2149.523 kb on + strand at 2149.523 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 2,147,622 + AO353_09830 0.19 -0.5 2,147,622 + AO353_09830 0.19 +0.2 2,147,694 + AO353_09830 0.25 -1.4 2,147,694 + AO353_09830 0.25 -0.1 2,147,694 + AO353_09830 0.25 +0.3 2,147,694 + AO353_09830 0.25 +1.5 2,147,694 + AO353_09830 0.25 -1.1 2,147,694 + AO353_09830 0.25 +0.6 2,147,694 + AO353_09830 0.25 -0.5 2,147,694 + AO353_09830 0.25 -0.4 2,147,695 - AO353_09830 0.26 -0.3 2,147,695 - AO353_09830 0.26 -1.0 2,147,695 - AO353_09830 0.26 -0.1 2,147,695 - AO353_09830 0.26 +1.9 2,147,739 + AO353_09830 0.29 -2.0 2,147,739 + AO353_09830 0.29 -0.1 2,147,739 + AO353_09830 0.29 -0.8 2,147,739 + AO353_09830 0.29 -0.9 2,147,739 + AO353_09830 0.29 +2.7 2,147,739 + AO353_09830 0.29 -0.1 2,147,739 + AO353_09830 0.29 -2.5 2,147,739 + AO353_09830 0.29 +1.8 2,147,740 - AO353_09830 0.29 -0.8 2,147,740 - AO353_09830 0.29 -0.3 2,147,740 - AO353_09830 0.29 +0.8 2,147,740 - AO353_09830 0.29 +1.0 2,147,740 - AO353_09830 0.29 -0.5 2,147,740 - AO353_09830 0.29 +1.6 2,147,740 - AO353_09830 0.29 +0.0 2,147,740 - AO353_09830 0.29 -2.5 2,147,743 + AO353_09830 0.30 -0.8 2,147,743 + AO353_09830 0.30 +0.8 2,147,743 + AO353_09830 0.30 +1.5 2,147,743 + AO353_09830 0.30 -0.5 2,147,743 + AO353_09830 0.30 -1.3 2,147,743 + AO353_09830 0.30 -0.1 2,147,743 + AO353_09830 0.30 +0.4 2,147,744 - AO353_09830 0.30 -1.1 2,147,744 - AO353_09830 0.30 -0.2 2,147,744 - AO353_09830 0.30 -2.8 2,147,744 - AO353_09830 0.30 -0.7 2,147,744 - AO353_09830 0.30 +3.1 2,147,744 - AO353_09830 0.30 -2.0 2,147,744 - AO353_09830 0.30 +0.2 2,147,923 + AO353_09830 0.45 +0.1 2,147,923 + AO353_09830 0.45 -0.2 2,147,923 + AO353_09830 0.45 -1.1 2,147,923 + AO353_09830 0.45 -2.6 2,147,923 + AO353_09830 0.45 +0.5 2,148,153 + AO353_09830 0.65 +0.6 2,148,153 + AO353_09830 0.65 -1.0 2,148,153 + AO353_09830 0.65 -2.1 2,148,317 - AO353_09830 0.80 +0.9 2,148,429 + AO353_09830 0.89 +0.5 2,148,429 + AO353_09830 0.89 -1.4 2,148,429 + AO353_09830 0.89 -0.1 2,148,430 - AO353_09830 0.89 +1.1 2,148,430 - AO353_09830 0.89 +0.8 2,148,430 - AO353_09830 0.89 -1.2 2,148,430 - AO353_09830 0.89 +0.2 2,148,507 + -0.7 2,148,508 - -1.8 2,148,508 - -1.7 2,148,508 - +0.6 2,148,508 - -0.0 2,148,508 - +0.5 2,148,508 - +1.2 2,148,555 + +0.3 2,148,556 - -0.5 2,148,556 - -2.5 2,148,556 - +0.2 2,148,718 + AO353_09835 0.78 -3.5 2,148,718 + AO353_09835 0.78 +0.5 2,148,718 + AO353_09835 0.78 -1.5 2,148,718 + AO353_09835 0.78 -1.8 2,148,718 + AO353_09835 0.78 +1.5 2,148,718 + AO353_09835 0.78 -0.6 2,148,718 + AO353_09835 0.78 +0.4 2,148,719 - AO353_09835 0.78 -2.1 2,148,719 - AO353_09835 0.78 -1.9 2,148,719 - AO353_09835 0.78 -1.3 2,148,756 + +0.5 2,148,756 + +0.1 2,148,756 + -0.4 2,148,757 - -0.3 2,148,757 - +0.2 2,148,785 - -1.1 2,148,839 + -0.7 2,148,881 - +0.8 2,148,918 + +1.7 2,148,919 - +1.8 2,148,945 + +1.0 2,149,203 + AO353_09840 0.44 -0.2 2,149,203 + AO353_09840 0.44 -2.3 2,149,203 + AO353_09840 0.44 -2.6 2,149,203 + AO353_09840 0.44 +0.6 2,149,203 + AO353_09840 0.44 -0.0 2,149,203 + AO353_09840 0.44 -1.8 2,149,203 + AO353_09840 0.44 -0.1 2,149,203 + AO353_09840 0.44 -0.6 2,149,203 + AO353_09840 0.44 +0.5 2,149,204 - AO353_09840 0.44 +1.2 2,149,204 - AO353_09840 0.44 +1.3 2,149,204 - AO353_09840 0.44 +1.1 2,149,204 - AO353_09840 0.44 +1.5 2,149,204 - AO353_09840 0.44 -0.4 2,149,204 - AO353_09840 0.44 +0.6 2,149,204 - AO353_09840 0.44 +0.2 2,149,204 - AO353_09840 0.44 +0.7 2,149,283 + AO353_09840 0.58 +0.9 2,149,284 - AO353_09840 0.58 -1.8 2,149,284 - AO353_09840 0.58 +1.0 2,149,368 + AO353_09840 0.73 -1.1 2,149,468 + +0.5 2,149,468 + -1.3 2,149,468 + +0.9 2,149,468 + +1.8 2,149,468 + -0.6 2,149,469 - -0.5 2,149,469 - +1.7 2,149,523 + +0.3 2,149,523 + +0.2 2,149,523 + -0.3 2,149,523 + -1.3
Or see this region's nucleotide sequence