Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03650 and AO353_03655 are separated by 2 nucleotides AO353_03655 and AO353_03660 are separated by 144 nucleotides
AO353_03650: AO353_03650 - histidine kinase, at 777,968 to 780,007
_03650
AO353_03655: AO353_03655 - cobalamin adenosyltransferase, at 780,010 to 780,591
_03655
AO353_03660: AO353_03660 - hypothetical protein, at 780,736 to 781,677
_03660
Position (kb) 780
781 Strain fitness (log2 ratio) -2
-1
0
1
2 at 780.006 kb on - strand at 780.034 kb on + strand at 780.034 kb on + strand at 780.034 kb on + strand at 780.035 kb on - strand at 780.035 kb on - strand at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.275 kb on - strand at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.639 kb on + strand at 780.640 kb on - strand at 780.640 kb on - strand at 780.640 kb on - strand at 780.646 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.690 kb on + strand at 780.691 kb on - strand at 780.691 kb on - strand at 780.691 kb on - strand at 780.826 kb on + strand at 780.827 kb on - strand at 780.827 kb on - strand at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.179 kb on - strand, within AO353_03660 at 781.283 kb on + strand, within AO353_03660 at 781.340 kb on + strand, within AO353_03660
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 780,006 - +1.3 780,034 + -0.2 780,034 + -1.0 780,034 + -1.0 780,035 - -2.0 780,035 - +0.4 780,274 + AO353_03655 0.45 -1.6 780,274 + AO353_03655 0.45 -0.3 780,274 + AO353_03655 0.45 -0.2 780,274 + AO353_03655 0.45 +0.4 780,274 + AO353_03655 0.45 +0.0 780,274 + AO353_03655 0.45 -0.2 780,275 - +0.0 780,275 - AO353_03655 0.46 +0.0 780,275 - AO353_03655 0.46 -0.6 780,275 - AO353_03655 0.46 +2.6 780,275 - AO353_03655 0.46 +0.8 780,484 + AO353_03655 0.81 -1.2 780,484 + AO353_03655 0.81 -1.3 780,484 + AO353_03655 0.81 +0.4 780,485 - AO353_03655 0.82 -0.4 780,485 - AO353_03655 0.82 -0.6 780,485 - AO353_03655 0.82 -1.4 780,639 + -1.7 780,640 - -0.6 780,640 - -0.6 780,640 - +0.0 780,646 - -2.1 780,666 - -0.3 780,666 - -0.6 780,666 - -0.9 780,666 - -1.1 780,690 + -1.0 780,691 - -1.3 780,691 - -0.8 780,691 - -0.6 780,826 + +1.0 780,827 - -0.0 780,827 - +1.2 781,034 + AO353_03660 0.32 -0.4 781,034 + AO353_03660 0.32 -1.6 781,034 + AO353_03660 0.32 -1.7 781,034 + AO353_03660 0.32 +1.0 781,034 + AO353_03660 0.32 -1.4 781,035 - AO353_03660 0.32 -0.6 781,035 - AO353_03660 0.32 -1.4 781,035 - AO353_03660 0.32 +1.4 781,035 - AO353_03660 0.32 -0.2 781,179 - AO353_03660 0.47 +1.8 781,283 + AO353_03660 0.58 +0.0 781,340 + AO353_03660 0.64 +1.0
Or see this region's nucleotide sequence