Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03560 and AO353_03565 overlap by 1 nucleotides AO353_03565 and AO353_03570 are separated by 14 nucleotides AO353_03570 and AO353_03575 overlap by 11 nucleotides AO353_03575 and AO353_03580 are separated by 139 nucleotides
AO353_03560: AO353_03560 - protein TolA, at 762,025 to 763,104
_03560
AO353_03565: AO353_03565 - protein TolR, at 763,104 to 763,565
_03565
AO353_03570: AO353_03570 - protein TolQ, at 763,580 to 764,275
_03570
AO353_03575: AO353_03575 - 4-hydroxybenzoyl-CoA thioesterase, at 764,265 to 764,732
_03575
AO353_03580: AO353_03580 - ATP-dependent DNA helicase RuvB, at 764,872 to 765,933
_03580
Position (kb) 763
764
765 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 763.068 kb on - strand at 763.582 kb on - strand at 763.582 kb on - strand at 763.582 kb on - strand at 763.582 kb on - strand at 763.582 kb on - strand at 763.582 kb on - strand at 764.334 kb on + strand, within AO353_03575 at 764.335 kb on - strand, within AO353_03575 at 764.335 kb on - strand, within AO353_03575 at 764.335 kb on - strand, within AO353_03575 at 764.335 kb on - strand, within AO353_03575 at 764.367 kb on - strand, within AO353_03575 at 764.367 kb on - strand, within AO353_03575 at 764.367 kb on - strand, within AO353_03575 at 764.367 kb on - strand, within AO353_03575 at 764.367 kb on - strand, within AO353_03575 at 764.367 kb on - strand, within AO353_03575 at 764.445 kb on - strand, within AO353_03575 at 764.476 kb on - strand, within AO353_03575 at 764.476 kb on - strand, within AO353_03575 at 764.476 kb on - strand, within AO353_03575 at 764.476 kb on - strand, within AO353_03575 at 764.488 kb on - strand, within AO353_03575 at 764.488 kb on - strand, within AO353_03575 at 764.525 kb on - strand, within AO353_03575 at 764.628 kb on - strand, within AO353_03575 at 764.634 kb on - strand, within AO353_03575 at 764.634 kb on - strand, within AO353_03575 at 764.639 kb on - strand, within AO353_03575 at 764.639 kb on - strand, within AO353_03575 at 764.639 kb on - strand, within AO353_03575 at 764.639 kb on - strand, within AO353_03575 at 764.643 kb on - strand, within AO353_03575 at 764.643 kb on - strand, within AO353_03575 at 764.648 kb on - strand, within AO353_03575 at 764.648 kb on - strand, within AO353_03575 at 764.651 kb on - strand, within AO353_03575 at 764.651 kb on - strand, within AO353_03575 at 764.651 kb on - strand, within AO353_03575 at 764.651 kb on - strand, within AO353_03575 at 764.681 kb on - strand, within AO353_03575 at 764.681 kb on - strand, within AO353_03575 at 764.684 kb on - strand, within AO353_03575 at 764.684 kb on - strand, within AO353_03575 at 764.684 kb on - strand, within AO353_03575 at 764.733 kb on - strand at 764.733 kb on - strand at 764.733 kb on - strand at 764.733 kb on - strand at 764.733 kb on - strand at 764.733 kb on - strand at 764.738 kb on - strand at 764.738 kb on - strand at 764.745 kb on - strand at 764.831 kb on - strand at 764.851 kb on + strand at 764.852 kb on - strand at 764.852 kb on - strand at 764.882 kb on - strand at 764.921 kb on - strand at 764.954 kb on + strand at 764.954 kb on + strand at 764.955 kb on - strand at 764.955 kb on - strand at 764.997 kb on + strand, within AO353_03580 at 764.999 kb on + strand, within AO353_03580 at 764.999 kb on + strand, within AO353_03580 at 765.198 kb on + strand, within AO353_03580 at 765.198 kb on + strand, within AO353_03580 at 765.199 kb on - strand, within AO353_03580 at 765.205 kb on - strand, within AO353_03580 at 765.205 kb on - strand, within AO353_03580 at 765.274 kb on - strand, within AO353_03580
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 763,068 - -2.0 763,582 - +2.0 763,582 - -2.3 763,582 - +0.0 763,582 - -1.0 763,582 - -2.3 763,582 - -0.3 764,334 + AO353_03575 0.15 -2.7 764,335 - AO353_03575 0.15 +0.6 764,335 - AO353_03575 0.15 +0.5 764,335 - AO353_03575 0.15 -0.2 764,335 - AO353_03575 0.15 -0.5 764,367 - AO353_03575 0.22 +0.5 764,367 - AO353_03575 0.22 +0.5 764,367 - AO353_03575 0.22 -1.3 764,367 - AO353_03575 0.22 +0.0 764,367 - AO353_03575 0.22 -0.2 764,367 - AO353_03575 0.22 -2.7 764,445 - AO353_03575 0.38 +2.0 764,476 - AO353_03575 0.45 -0.2 764,476 - AO353_03575 0.45 -0.5 764,476 - AO353_03575 0.45 -0.6 764,476 - AO353_03575 0.45 +0.4 764,488 - AO353_03575 0.48 -0.2 764,488 - AO353_03575 0.48 +1.0 764,525 - AO353_03575 0.56 -1.3 764,628 - AO353_03575 0.78 -2.7 764,634 - AO353_03575 0.79 -0.5 764,634 - AO353_03575 0.79 +1.5 764,639 - AO353_03575 0.80 -1.0 764,639 - AO353_03575 0.80 +0.2 764,639 - AO353_03575 0.80 +1.6 764,639 - AO353_03575 0.80 +0.8 764,643 - AO353_03575 0.81 +0.9 764,643 - AO353_03575 0.81 +3.0 764,648 - AO353_03575 0.82 -0.8 764,648 - AO353_03575 0.82 -2.5 764,651 - AO353_03575 0.82 -1.8 764,651 - AO353_03575 0.82 +1.7 764,651 - AO353_03575 0.82 +1.0 764,651 - AO353_03575 0.82 +0.8 764,681 - AO353_03575 0.89 -0.5 764,681 - AO353_03575 0.89 +0.0 764,684 - AO353_03575 0.90 -0.0 764,684 - AO353_03575 0.90 +0.2 764,684 - AO353_03575 0.90 +0.0 764,733 - -2.5 764,733 - -0.4 764,733 - +0.0 764,733 - -0.7 764,733 - -0.1 764,733 - +4.0 764,738 - +0.3 764,738 - +2.7 764,745 - +0.9 764,831 - +0.3 764,851 + -0.8 764,852 - +1.6 764,852 - +0.7 764,882 - -2.0 764,921 - -2.0 764,954 + -2.0 764,954 + -0.3 764,955 - +0.0 764,955 - -1.3 764,997 + AO353_03580 0.12 -2.0 764,999 + AO353_03580 0.12 -2.0 764,999 + AO353_03580 0.12 -1.8 765,198 + AO353_03580 0.31 -0.8 765,198 + AO353_03580 0.31 -1.3 765,199 - AO353_03580 0.31 -0.5 765,205 - AO353_03580 0.31 -2.4 765,205 - AO353_03580 0.31 -1.3 765,274 - AO353_03580 0.38 +1.6
Or see this region's nucleotide sequence