Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01450 and AO353_01455 overlap by 1 nucleotides AO353_01455 and AO353_01460 overlap by 4 nucleotides AO353_01460 and AO353_01465 are separated by 110 nucleotides
AO353_01450: AO353_01450 - tetraacyldisaccharide 4'-kinase, at 311,056 to 312,066
_01450
AO353_01455: AO353_01455 - biopolymer transporter ExbD, at 312,066 to 312,494
_01455
AO353_01460: AO353_01460 - biopolymer transporter ExbB, at 312,491 to 313,126
_01460
AO353_01465: AO353_01465 - competence protein ComEC, at 313,237 to 315,471
_01465
Position (kb) 312
313
314 Strain fitness (log2 ratio) -2
-1
0
1
2 at 312.480 kb on - strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.165 kb on - strand at 313.165 kb on - strand at 313.239 kb on - strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.350 kb on - strand at 313.350 kb on - strand at 313.350 kb on - strand at 313.360 kb on - strand at 313.360 kb on - strand at 313.507 kb on + strand, within AO353_01465 at 313.508 kb on - strand, within AO353_01465 at 313.508 kb on - strand, within AO353_01465 at 313.508 kb on - strand, within AO353_01465 at 313.508 kb on - strand, within AO353_01465 at 313.665 kb on + strand, within AO353_01465 at 313.665 kb on + strand, within AO353_01465 at 313.665 kb on + strand, within AO353_01465 at 313.718 kb on + strand, within AO353_01465 at 313.925 kb on + strand, within AO353_01465 at 313.926 kb on - strand, within AO353_01465 at 314.012 kb on - strand, within AO353_01465 at 314.033 kb on - strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.095 kb on + strand, within AO353_01465 at 314.095 kb on + strand, within AO353_01465 at 314.095 kb on + strand, within AO353_01465 at 314.095 kb on + strand, within AO353_01465 at 314.096 kb on - strand, within AO353_01465 at 314.116 kb on + strand, within AO353_01465 at 314.116 kb on + strand, within AO353_01465
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 312,480 - -0.7 313,164 + +0.8 313,164 + -0.4 313,164 + +0.3 313,164 + +0.3 313,164 + -1.0 313,165 - -1.3 313,165 - +1.0 313,239 - -1.2 313,349 + -0.4 313,349 + -0.4 313,349 + -0.2 313,349 + -1.5 313,350 - -1.5 313,350 - -0.7 313,350 - -1.2 313,360 - -2.5 313,360 - -1.5 313,507 + AO353_01465 0.12 +1.0 313,508 - AO353_01465 0.12 +0.4 313,508 - AO353_01465 0.12 -0.7 313,508 - AO353_01465 0.12 -0.7 313,508 - AO353_01465 0.12 +0.1 313,665 + AO353_01465 0.19 -0.4 313,665 + AO353_01465 0.19 +0.8 313,665 + AO353_01465 0.19 -1.3 313,718 + AO353_01465 0.22 -2.3 313,925 + AO353_01465 0.31 -0.8 313,926 - AO353_01465 0.31 -1.0 314,012 - AO353_01465 0.35 +0.8 314,033 - AO353_01465 0.36 +0.3 314,092 + AO353_01465 0.38 +0.3 314,092 + AO353_01465 0.38 +1.2 314,092 + AO353_01465 0.38 -0.3 314,092 + AO353_01465 0.38 -0.4 314,092 + AO353_01465 0.38 -1.0 314,092 + AO353_01465 0.38 -1.4 314,092 + AO353_01465 0.38 +0.8 314,092 + AO353_01465 0.38 +0.8 314,092 + AO353_01465 0.38 +2.1 314,093 - AO353_01465 0.38 +1.3 314,093 - AO353_01465 0.38 -0.7 314,093 - AO353_01465 0.38 +1.2 314,093 - AO353_01465 0.38 +0.8 314,093 - AO353_01465 0.38 +0.3 314,095 + AO353_01465 0.38 -2.4 314,095 + AO353_01465 0.38 +0.3 314,095 + AO353_01465 0.38 -0.3 314,095 + AO353_01465 0.38 -1.4 314,096 - AO353_01465 0.38 +1.1 314,116 + AO353_01465 0.39 +1.0 314,116 + AO353_01465 0.39 -2.0
Or see this region's nucleotide sequence