Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00545 and AO353_00550 are separated by 282 nucleotides AO353_00550 and AO353_00555 are separated by 48 nucleotides AO353_00555 and AO353_00560 are separated by 200 nucleotides
AO353_00545: AO353_00545 - erythronate-4-phosphate dehydrogenase, at 113,502 to 114,644
_00545
AO353_00550: AO353_00550 - MATE family efflux transporter, at 114,927 to 116,336
_00550
AO353_00555: AO353_00555 - sulfurtransferase, at 116,385 to 116,636
_00555
AO353_00560: AO353_00560 - 23S rRNA methyltransferase, at 116,837 to 117,910
_00560
Position (kb)
114
115
116
117 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 114.673 kb on + strand at 114.673 kb on + strand at 114.673 kb on + strand at 114.674 kb on - strand at 114.674 kb on - strand at 114.674 kb on - strand at 114.674 kb on - strand at 114.674 kb on - strand at 114.674 kb on - strand at 114.674 kb on - strand at 114.679 kb on + strand at 114.679 kb on + strand at 114.679 kb on + strand at 114.679 kb on + strand at 114.680 kb on - strand at 114.680 kb on - strand at 114.680 kb on - strand at 114.680 kb on - strand at 114.680 kb on - strand at 114.713 kb on - strand at 114.713 kb on - strand at 114.713 kb on - strand at 114.713 kb on - strand at 114.713 kb on - strand at 114.713 kb on - strand at 114.750 kb on - strand at 114.835 kb on + strand at 114.881 kb on + strand at 114.881 kb on + strand at 114.882 kb on - strand at 114.957 kb on - strand at 114.996 kb on - strand at 115.143 kb on + strand, within AO353_00550 at 115.143 kb on + strand, within AO353_00550 at 115.143 kb on + strand, within AO353_00550 at 115.144 kb on - strand, within AO353_00550 at 115.144 kb on - strand, within AO353_00550 at 115.144 kb on - strand, within AO353_00550 at 115.144 kb on - strand, within AO353_00550 at 115.144 kb on - strand, within AO353_00550 at 115.357 kb on - strand, within AO353_00550 at 115.357 kb on - strand, within AO353_00550 at 115.398 kb on + strand, within AO353_00550 at 115.398 kb on + strand, within AO353_00550 at 115.398 kb on + strand, within AO353_00550 at 115.398 kb on + strand, within AO353_00550 at 115.398 kb on + strand, within AO353_00550 at 115.398 kb on + strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.399 kb on - strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.401 kb on + strand, within AO353_00550 at 115.402 kb on - strand, within AO353_00550 at 115.402 kb on - strand, within AO353_00550 at 115.402 kb on - strand, within AO353_00550 at 115.402 kb on - strand, within AO353_00550 at 115.402 kb on - strand, within AO353_00550 at 115.402 kb on - strand, within AO353_00550 at 115.405 kb on + strand, within AO353_00550 at 115.405 kb on + strand, within AO353_00550 at 115.405 kb on + strand, within AO353_00550 at 115.405 kb on + strand, within AO353_00550 at 115.405 kb on + strand, within AO353_00550 at 115.405 kb on + strand, within AO353_00550 at 115.405 kb on + strand, within AO353_00550 at 115.405 kb on + strand, within AO353_00550 at 115.406 kb on - strand, within AO353_00550 at 115.406 kb on - strand, within AO353_00550 at 115.406 kb on - strand, within AO353_00550 at 115.406 kb on - strand, within AO353_00550 at 115.416 kb on + strand, within AO353_00550 at 115.416 kb on + strand, within AO353_00550 at 115.417 kb on - strand, within AO353_00550 at 115.417 kb on - strand, within AO353_00550 at 115.417 kb on - strand, within AO353_00550 at 115.471 kb on + strand, within AO353_00550 at 115.471 kb on + strand, within AO353_00550 at 115.471 kb on + strand, within AO353_00550 at 115.472 kb on - strand, within AO353_00550 at 115.472 kb on - strand, within AO353_00550 at 115.472 kb on - strand, within AO353_00550 at 115.472 kb on - strand, within AO353_00550 at 115.472 kb on - strand, within AO353_00550 at 115.472 kb on - strand, within AO353_00550 at 115.472 kb on - strand, within AO353_00550 at 115.494 kb on + strand, within AO353_00550 at 115.494 kb on + strand, within AO353_00550 at 115.494 kb on + strand, within AO353_00550 at 115.494 kb on + strand, within AO353_00550 at 115.495 kb on - strand, within AO353_00550 at 115.495 kb on - strand, within AO353_00550 at 115.495 kb on - strand, within AO353_00550 at 115.506 kb on + strand, within AO353_00550 at 115.506 kb on + strand, within AO353_00550 at 115.506 kb on + strand, within AO353_00550 at 115.506 kb on + strand, within AO353_00550 at 115.506 kb on + strand, within AO353_00550 at 115.507 kb on - strand, within AO353_00550 at 115.507 kb on - strand, within AO353_00550 at 115.507 kb on - strand, within AO353_00550 at 115.507 kb on - strand, within AO353_00550 at 115.507 kb on - strand, within AO353_00550 at 115.507 kb on - strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.620 kb on + strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.621 kb on - strand, within AO353_00550 at 115.715 kb on - strand, within AO353_00550 at 115.834 kb on - strand, within AO353_00550 at 115.834 kb on - strand, within AO353_00550 at 115.876 kb on + strand, within AO353_00550 at 115.877 kb on - strand, within AO353_00550 at 115.998 kb on + strand, within AO353_00550 at 115.998 kb on + strand, within AO353_00550 at 116.046 kb on + strand, within AO353_00550 at 116.047 kb on - strand, within AO353_00550 at 116.058 kb on + strand, within AO353_00550 at 116.059 kb on - strand, within AO353_00550 at 116.152 kb on - strand, within AO353_00550 at 116.178 kb on + strand, within AO353_00550 at 116.178 kb on + strand, within AO353_00550 at 116.179 kb on - strand, within AO353_00550 at 116.179 kb on - strand, within AO353_00550 at 116.179 kb on - strand, within AO353_00550 at 116.179 kb on - strand, within AO353_00550 at 116.335 kb on - strand at 116.335 kb on - strand at 116.743 kb on + strand at 116.743 kb on + strand at 116.743 kb on + strand at 116.744 kb on - strand at 116.744 kb on - strand at 116.744 kb on - strand at 116.858 kb on + strand at 116.858 kb on + strand at 116.859 kb on - strand at 116.859 kb on - strand at 116.904 kb on + strand at 116.904 kb on + strand at 116.905 kb on - strand at 116.905 kb on - strand at 116.905 kb on - strand at 116.992 kb on - strand, within AO353_00560 at 116.992 kb on - strand, within AO353_00560 at 116.992 kb on - strand, within AO353_00560 at 117.139 kb on + strand, within AO353_00560 at 117.139 kb on + strand, within AO353_00560 at 117.140 kb on - strand, within AO353_00560 at 117.140 kb on - strand, within AO353_00560 at 117.140 kb on - strand, within AO353_00560
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 114,673 + +1.1 114,673 + -1.9 114,673 + +0.8 114,674 - +0.2 114,674 - +0.8 114,674 - -0.5 114,674 - -0.8 114,674 - +0.2 114,674 - -2.8 114,674 - -0.4 114,679 + -0.6 114,679 + -0.2 114,679 + -0.5 114,679 + +0.4 114,680 - -0.2 114,680 - -0.8 114,680 - -2.0 114,680 - +0.6 114,680 - -1.2 114,713 - -0.8 114,713 - +2.4 114,713 - +0.2 114,713 - -0.5 114,713 - -0.3 114,713 - +1.0 114,750 - +0.1 114,835 + -1.6 114,881 + +0.4 114,881 + +1.5 114,882 - -2.1 114,957 - -0.2 114,996 - -0.9 115,143 + AO353_00550 0.15 -1.5 115,143 + AO353_00550 0.15 -0.9 115,143 + AO353_00550 0.15 -0.6 115,144 - AO353_00550 0.15 -2.5 115,144 - AO353_00550 0.15 -1.2 115,144 - AO353_00550 0.15 -0.2 115,144 - AO353_00550 0.15 -0.8 115,144 - AO353_00550 0.15 -2.8 115,357 - AO353_00550 0.30 +0.1 115,357 - AO353_00550 0.30 -2.0 115,398 + AO353_00550 0.33 -1.0 115,398 + AO353_00550 0.33 -0.8 115,398 + AO353_00550 0.33 -0.5 115,398 + AO353_00550 0.33 -1.9 115,398 + AO353_00550 0.33 -1.5 115,398 + AO353_00550 0.33 -1.2 115,399 - AO353_00550 0.33 -0.8 115,399 - AO353_00550 0.33 -2.2 115,399 - AO353_00550 0.33 -2.2 115,399 - AO353_00550 0.33 -1.2 115,399 - AO353_00550 0.33 -1.8 115,399 - AO353_00550 0.33 -1.9 115,399 - AO353_00550 0.33 -2.4 115,399 - AO353_00550 0.33 -0.8 115,399 - AO353_00550 0.33 -1.0 115,401 + AO353_00550 0.34 +0.6 115,401 + AO353_00550 0.34 -0.8 115,401 + AO353_00550 0.34 -0.2 115,401 + AO353_00550 0.34 -0.4 115,401 + AO353_00550 0.34 -1.4 115,401 + AO353_00550 0.34 -2.0 115,401 + AO353_00550 0.34 -1.8 115,401 + AO353_00550 0.34 -2.5 115,401 + AO353_00550 0.34 +0.2 115,401 + AO353_00550 0.34 -0.2 115,402 - AO353_00550 0.34 -0.3 115,402 - AO353_00550 0.34 -0.5 115,402 - AO353_00550 0.34 -1.2 115,402 - AO353_00550 0.34 -3.0 115,402 - AO353_00550 0.34 -1.2 115,402 - AO353_00550 0.34 -1.5 115,405 + AO353_00550 0.34 +0.4 115,405 + AO353_00550 0.34 -1.0 115,405 + AO353_00550 0.34 +0.1 115,405 + AO353_00550 0.34 +0.8 115,405 + AO353_00550 0.34 -1.5 115,405 + AO353_00550 0.34 -0.8 115,405 + AO353_00550 0.34 -1.0 115,405 + AO353_00550 0.34 -2.3 115,406 - AO353_00550 0.34 -0.7 115,406 - AO353_00550 0.34 -0.6 115,406 - AO353_00550 0.34 -2.9 115,406 - AO353_00550 0.34 -2.4 115,416 + AO353_00550 0.35 -2.0 115,416 + AO353_00550 0.35 -2.5 115,417 - AO353_00550 0.35 -0.6 115,417 - AO353_00550 0.35 -0.8 115,417 - AO353_00550 0.35 +1.4 115,471 + AO353_00550 0.39 -2.1 115,471 + AO353_00550 0.39 -1.9 115,471 + AO353_00550 0.39 -1.5 115,472 - AO353_00550 0.39 -1.5 115,472 - AO353_00550 0.39 -1.7 115,472 - AO353_00550 0.39 -0.4 115,472 - AO353_00550 0.39 -0.2 115,472 - AO353_00550 0.39 -0.6 115,472 - AO353_00550 0.39 -2.6 115,472 - AO353_00550 0.39 +1.2 115,494 + AO353_00550 0.40 +0.8 115,494 + AO353_00550 0.40 -0.5 115,494 + AO353_00550 0.40 -0.8 115,494 + AO353_00550 0.40 -1.0 115,495 - AO353_00550 0.40 -2.5 115,495 - AO353_00550 0.40 +0.8 115,495 - AO353_00550 0.40 +1.8 115,506 + AO353_00550 0.41 -1.4 115,506 + AO353_00550 0.41 -0.9 115,506 + AO353_00550 0.41 -0.9 115,506 + AO353_00550 0.41 +0.1 115,506 + AO353_00550 0.41 -1.4 115,507 - AO353_00550 0.41 +0.8 115,507 - AO353_00550 0.41 -0.9 115,507 - AO353_00550 0.41 -2.2 115,507 - AO353_00550 0.41 -0.6 115,507 - AO353_00550 0.41 -0.4 115,507 - AO353_00550 0.41 -0.4 115,620 + AO353_00550 0.49 -0.6 115,620 + AO353_00550 0.49 -3.0 115,620 + AO353_00550 0.49 -0.2 115,620 + AO353_00550 0.49 -0.2 115,620 + AO353_00550 0.49 -0.8 115,620 + AO353_00550 0.49 +0.8 115,620 + AO353_00550 0.49 -0.9 115,620 + AO353_00550 0.49 +1.1 115,620 + AO353_00550 0.49 -0.5 115,620 + AO353_00550 0.49 -0.9 115,620 + AO353_00550 0.49 +1.4 115,621 - AO353_00550 0.49 -0.1 115,621 - AO353_00550 0.49 -1.5 115,621 - AO353_00550 0.49 -1.6 115,621 - AO353_00550 0.49 +0.5 115,621 - AO353_00550 0.49 -1.2 115,621 - AO353_00550 0.49 -0.2 115,621 - AO353_00550 0.49 -1.0 115,621 - AO353_00550 0.49 -1.5 115,621 - AO353_00550 0.49 -1.0 115,715 - AO353_00550 0.56 +0.8 115,834 - AO353_00550 0.64 -0.8 115,834 - AO353_00550 0.64 -1.3 115,876 + AO353_00550 0.67 -1.4 115,877 - AO353_00550 0.67 -1.1 115,998 + AO353_00550 0.76 +0.5 115,998 + AO353_00550 0.76 -0.8 116,046 + AO353_00550 0.79 +1.1 116,047 - AO353_00550 0.79 -0.6 116,058 + AO353_00550 0.80 -0.5 116,059 - AO353_00550 0.80 -3.1 116,152 - AO353_00550 0.87 -1.8 116,178 + AO353_00550 0.89 -1.8 116,178 + AO353_00550 0.89 -0.8 116,179 - AO353_00550 0.89 -2.2 116,179 - AO353_00550 0.89 -1.9 116,179 - AO353_00550 0.89 -2.1 116,179 - AO353_00550 0.89 -0.2 116,335 - -1.3 116,335 - -3.1 116,743 + -0.6 116,743 + -0.6 116,743 + +0.1 116,744 - -0.2 116,744 - -0.2 116,744 - -1.2 116,858 + +0.8 116,858 + +1.2 116,859 - -0.9 116,859 - -0.3 116,904 + +0.7 116,904 + +0.3 116,905 - -0.5 116,905 - +1.0 116,905 - +0.4 116,992 - AO353_00560 0.14 -0.8 116,992 - AO353_00560 0.14 -2.6 116,992 - AO353_00560 0.14 +0.8 117,139 + AO353_00560 0.28 +1.2 117,139 + AO353_00560 0.28 +0.1 117,140 - AO353_00560 0.28 +0.5 117,140 - AO353_00560 0.28 -1.8 117,140 - AO353_00560 0.28 -0.8
Or see this region's nucleotide sequence