Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1795

Experiment: 1-ethyl-3-methylimidazolium chloride 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 20 mM
2,123,654	-		Shewana3_1794	0.55	+0.7
2,123,729	+		Shewana3_1794	0.60	+0.7
2,123,737	-		Shewana3_1794	0.61	+0.7
2,123,751	-		Shewana3_1794	0.62	+0.7
2,123,860	+		Shewana3_1794	0.69	+0.7
2,123,876	+		Shewana3_1794	0.70	+0.7
2,123,876	-		Shewana3_1794	0.70	+0.7
2,123,891	+		Shewana3_1794	0.71	+1.7
2,123,891	+		Shewana3_1794	0.71	+0.7
2,123,909	+		Shewana3_1794	0.72	+0.7
2,123,919	+		Shewana3_1794	0.73	+0.7
2,123,926	+		Shewana3_1794	0.73	+0.7
2,123,934	-		Shewana3_1794	0.74	+0.7
2,123,934	-		Shewana3_1794	0.74	+0.7
2,123,934	-		Shewana3_1794	0.74	-0.3
2,123,989	+		Shewana3_1794	0.78	+0.7
2,123,990	+		Shewana3_1794	0.78	+0.5
2,123,997	-		Shewana3_1794	0.78	+0.7
2,124,045	+		Shewana3_1794	0.82	+0.7
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,065	+		Shewana3_1794	0.83	+0.4
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,065	+		Shewana3_1794	0.83	-0.3
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,065	+		Shewana3_1794	0.83	-0.3
2,124,065	+		Shewana3_1794	0.83	-0.3
2,124,065	+		Shewana3_1794	0.83	+0.7
2,124,070	+		Shewana3_1794	0.83	+0.7
2,124,073	-		Shewana3_1794	0.83	+0.7
2,124,073	-		Shewana3_1794	0.83	+0.7
2,124,073	-		Shewana3_1794	0.83	+0.7
2,124,073	-		Shewana3_1794	0.83	+0.7
2,124,073	-		Shewana3_1794	0.83	+0.1
2,124,073	-		Shewana3_1794	0.83	+0.7
2,124,083	+		Shewana3_1794	0.84	+0.7
2,124,084	+		Shewana3_1794	0.84	+0.7
2,124,084	+		Shewana3_1794	0.84	+0.7
2,124,090	+		Shewana3_1794	0.85	+0.7
2,124,092	-		Shewana3_1794	0.85	+0.7
2,124,126	+		Shewana3_1794	0.87	+0.7
2,124,134	-		Shewana3_1794	0.88	-1.3
2,124,194	+				-0.3
2,124,194	+				-0.9
2,124,194	+				+0.7
2,124,202	-				+0.7
2,124,232	+				+0.7
2,124,236	+				-0.3
2,124,240	-				-0.9
2,124,240	-				+0.7
2,124,269	+				+0.7
2,124,270	+				+0.7
2,124,278	+				+1.4
2,124,278	-				+0.7
2,124,306	+				+0.7
2,124,308	+				+0.7
2,124,309	+				-2.3
2,124,309	+				+0.7
2,124,314	+				+0.7
2,124,314	-				+0.7
2,124,317	-				+0.7
2,124,317	-				+0.7
2,124,332	-				+0.7
2,124,334	+				-1.7
2,124,382	+				+0.4
2,124,382	+				-1.7
2,124,386	-				+0.7
2,124,442	+				+0.9
2,124,479	+				-0.4
2,124,487	-				+0.7
2,124,488	-				+0.7
2,124,538	+				+0.1
2,124,538	+				-0.2
2,124,538	+				+1.0
2,124,540	-				+0.7
2,124,562	+				+0.9
2,124,596	+				-0.3
2,124,596	+				+1.7
2,124,598	+				+0.7
2,124,598	+				+0.5
2,124,604	-				+0.7
2,124,604	-				+0.7
2,124,608	+				-1.3
2,124,613	+				+0.1
2,124,613	+				-0.9
2,124,613	+				-0.9
2,124,613	+				+0.7
2,124,613	+				-0.3
2,124,613	+				+1.7
2,124,621	-				+0.7
2,124,621	-				+0.7
2,124,673	-				+0.7
2,124,686	+				+0.7
2,124,717	+		Shewana3_1795	0.13	-1.3
2,124,747	+		Shewana3_1795	0.17	+0.7
2,124,747	+		Shewana3_1795	0.17	+0.7
2,124,747	+		Shewana3_1795	0.17	+0.5
2,124,755	-		Shewana3_1795	0.18	-0.3
2,124,755	-		Shewana3_1795	0.18	+0.7
2,124,755	-		Shewana3_1795	0.18	+0.7
2,124,757	+		Shewana3_1795	0.19	+0.7
2,124,817	+		Shewana3_1795	0.28	+0.7
2,124,827	+		Shewana3_1795	0.29	+0.7
2,124,827	+		Shewana3_1795	0.29	-1.3
2,124,832	+		Shewana3_1795	0.30	+0.7
2,124,835	+		Shewana3_1795	0.30	-0.9
2,124,835	-		Shewana3_1795	0.30	+0.7
2,124,840	+		Shewana3_1795	0.31	+0.7
2,124,840	+		Shewana3_1795	0.31	-1.3
2,124,848	-		Shewana3_1795	0.32	+0.7
2,124,863	+		Shewana3_1795	0.34	+0.7
2,124,871	-		Shewana3_1795	0.36	-2.2
2,124,875	+		Shewana3_1795	0.36	+0.7
2,124,875	+		Shewana3_1795	0.36	-0.9
2,124,875	+		Shewana3_1795	0.36	+0.7
2,124,918	+		Shewana3_1795	0.42	+0.7
2,124,926	-		Shewana3_1795	0.44	+0.7
2,124,926	-		Shewana3_1795	0.44	+0.7
2,124,926	-		Shewana3_1795	0.44	+0.7
2,124,950	-		Shewana3_1795	0.47	+0.7
2,124,952	+		Shewana3_1795	0.47	-1.3
2,124,952	+		Shewana3_1795	0.47	+0.7
2,124,952	+		Shewana3_1795	0.47	+1.1
2,124,960	-		Shewana3_1795	0.49	-0.7
2,124,960	-		Shewana3_1795	0.49	+0.7
2,124,960	-		Shewana3_1795	0.49	+0.7
2,124,960	-		Shewana3_1795	0.49	+0.7
2,124,960	-		Shewana3_1795	0.49	+0.7
2,124,960	-		Shewana3_1795	0.49	-0.9
2,124,974	+		Shewana3_1795	0.51	-0.9
2,124,974	+		Shewana3_1795	0.51	+1.3
2,124,974	+		Shewana3_1795	0.51	+0.7
2,124,982	-		Shewana3_1795	0.52	+0.7
2,124,982	-		Shewana3_1795	0.52	+0.7
2,124,988	-		Shewana3_1795	0.53	+0.7
2,125,001	+		Shewana3_1795	0.55	+0.7
2,125,046	+		Shewana3_1795	0.61	+0.7
2,125,059	+		Shewana3_1795	0.63	+0.7
2,125,059	-		Shewana3_1795	0.63	+0.7
2,125,061	+		Shewana3_1795	0.64	+1.7
2,125,067	-		Shewana3_1795	0.64	+0.7
2,125,080	+		Shewana3_1795	0.66	-0.7
2,125,080	+		Shewana3_1795	0.66	-1.7
2,125,080	+		Shewana3_1795	0.66	-0.9
2,125,088	-		Shewana3_1795	0.68	+0.7
2,125,088	-		Shewana3_1795	0.68	+0.7
2,125,088	-		Shewana3_1795	0.68	+0.7
2,125,088	-		Shewana3_1795	0.68	+0.7
2,125,088	-		Shewana3_1795	0.68	+0.7
2,125,107	-		Shewana3_1795	0.70	-0.3
2,125,116	+		Shewana3_1795	0.72	-0.3
2,125,116	+		Shewana3_1795	0.72	+0.7
2,125,162	+		Shewana3_1795	0.78	+0.4
2,125,168	+		Shewana3_1795	0.79	-0.7
2,125,176	+		Shewana3_1795	0.81	+0.5
2,125,264	+				-0.1
2,125,292	+				+0.7
2,125,300	-				+0.7
2,125,362	+				-2.8
2,125,397	+				+0.7
2,125,405	-				+0.7
2,125,405	-				+1.7
2,125,427	-				+0.7
2,125,431	+				+2.3
2,125,486	-		Shewana3_1796	0.11	+0.7
2,125,610	-		Shewana3_1796	0.53	-0.3
2,125,610	-		Shewana3_1796	0.53	-0.9
2,125,702	+		Shewana3_1796	0.85	+0.7
2,125,791	+		Shewana3_1797	0.20	+0.7
2,126,011	+				-0.9
2,126,051	+				+0.1
2,126,072	-				+0.1
2,126,277	-				-0.1