Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05528

Experiment: D-Glucose 20 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05526 and H281DRAFT_05527 are separated by 278 nucleotidesH281DRAFT_05527 and H281DRAFT_05528 are separated by 18 nucleotides H281DRAFT_05526: H281DRAFT_05526 - DNA-binding transcriptional regulator, MerR family, at 109,716 to 110,063 _05526 H281DRAFT_05527: H281DRAFT_05527 - transcriptional regulator, TetR family, at 110,342 to 110,992 _05527 H281DRAFT_05528: H281DRAFT_05528 - hypothetical protein, at 111,011 to 111,364 _05528 Position (kb) 111 112Strain fitness (log2 ratio) -2 -1 0 1 2 3at 110.014 kb on + strand, within H281DRAFT_05526at 110.062 kb on - strandat 110.150 kb on + strandat 110.168 kb on + strandat 110.181 kb on + strandat 110.182 kb on - strandat 110.182 kb on - strandat 110.306 kb on - strandat 110.313 kb on + strandat 110.314 kb on - strandat 110.344 kb on - strandat 110.388 kb on + strandat 110.388 kb on + strandat 110.388 kb on + strandat 110.388 kb on + strandat 110.388 kb on + strandat 110.388 kb on + strandat 110.388 kb on + strandat 110.389 kb on - strandat 110.785 kb on - strand, within H281DRAFT_05527at 110.785 kb on - strand, within H281DRAFT_05527at 110.809 kb on - strand, within H281DRAFT_05527at 110.814 kb on + strand, within H281DRAFT_05527at 110.831 kb on - strand, within H281DRAFT_05527at 110.914 kb on + strand, within H281DRAFT_05527at 111.022 kb on + strandat 111.022 kb on + strandat 111.214 kb on + strand, within H281DRAFT_05528at 111.215 kb on - strand, within H281DRAFT_05528at 111.412 kb on - strandat 111.492 kb on + strandat 111.594 kb on - strandat 111.620 kb on + strandat 111.620 kb on + strandat 111.621 kb on - strandat 111.621 kb on - strandat 111.621 kb on - strandat 111.621 kb on - strandat 111.621 kb on - strandat 111.712 kb on - strandat 111.718 kb on + strandat 111.743 kb on + strandat 111.743 kb on + strandat 111.791 kb on + strandat 111.792 kb on - strandat 111.878 kb on + strandat 111.879 kb on - strandat 111.897 kb on - strandat 111.934 kb on + strandat 111.941 kb on + strandat 112.000 kb on - strandat 112.086 kb on - strandat 112.086 kb on - strandat 112.086 kb on - strandat 112.090 kb on - strandat 112.143 kb on - strandat 112.194 kb on + strandat 112.194 kb on + strandat 112.205 kb on + strandat 112.305 kb on - strandat 112.310 kb on + strandat 112.311 kb on - strandat 112.311 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C)
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110,014 + H281DRAFT_05526 0.86 +0.0
110,062 - -0.6
110,150 + -0.2
110,168 + +0.4
110,181 + -0.9
110,182 - +0.0
110,182 - -0.1
110,306 - +0.0
110,313 + +0.5
110,314 - +0.5
110,344 - +0.3
110,388 + -0.4
110,388 + +1.0
110,388 + -0.5
110,388 + +0.1
110,388 + +0.6
110,388 + +0.8
110,388 + +0.0
110,389 - -0.2
110,785 - H281DRAFT_05527 0.68 +0.5
110,785 - H281DRAFT_05527 0.68 -0.2
110,809 - H281DRAFT_05527 0.72 -0.9
110,814 + H281DRAFT_05527 0.73 +1.5
110,831 - H281DRAFT_05527 0.75 -0.5
110,914 + H281DRAFT_05527 0.88 -0.8
111,022 + +1.0
111,022 + -0.8
111,214 + H281DRAFT_05528 0.57 +0.7
111,215 - H281DRAFT_05528 0.58 +0.5
111,412 - +0.2
111,492 + -1.9
111,594 - +0.2
111,620 + -0.9
111,620 + -0.3
111,621 - -1.1
111,621 - +0.2
111,621 - -0.5
111,621 - +1.2
111,621 - +0.3
111,712 - +0.5
111,718 + -0.2
111,743 + -0.9
111,743 + +0.4
111,791 + +0.6
111,792 - -0.2
111,878 + +0.6
111,879 - -0.4
111,897 - +0.2
111,934 + -0.4
111,941 + +0.2
112,000 - +0.6
112,086 - -0.8
112,086 - -0.0
112,086 - +1.0
112,090 - -0.1
112,143 - +0.4
112,194 + -0.5
112,194 + +0.7
112,205 + -0.3
112,305 - -0.3
112,310 + +2.0
112,311 - +3.6
112,311 - +0.2

Or see this region's nucleotide sequence