Experiment: D-Glucose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02216 and H281DRAFT_02217 overlap by 4 nucleotides H281DRAFT_02217 and H281DRAFT_02218 are separated by 90 nucleotides H281DRAFT_02218 and H281DRAFT_02219 are separated by 57 nucleotides
H281DRAFT_02216: H281DRAFT_02216 - MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG, at 358,676 to 360,070
_02216
H281DRAFT_02217: H281DRAFT_02217 - Peptidase family M48, at 360,067 to 361,350
_02217
H281DRAFT_02218: H281DRAFT_02218 - exodeoxyribonuclease-3, at 361,441 to 362,220
_02218
H281DRAFT_02219: H281DRAFT_02219 - polyphosphate:nucleotide phosphotransferase, PPK2 family, at 362,278 to 363,114
_02219
Position (kb) 360
361
362 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 359.183 kb on + strand, within H281DRAFT_02216 at 359.183 kb on + strand, within H281DRAFT_02216 at 359.183 kb on + strand at 359.184 kb on - strand, within H281DRAFT_02216 at 359.199 kb on + strand, within H281DRAFT_02216 at 359.199 kb on + strand, within H281DRAFT_02216 at 359.200 kb on - strand, within H281DRAFT_02216 at 359.200 kb on - strand, within H281DRAFT_02216 at 359.200 kb on - strand, within H281DRAFT_02216 at 359.202 kb on + strand, within H281DRAFT_02216 at 359.699 kb on + strand, within H281DRAFT_02216 at 359.699 kb on + strand, within H281DRAFT_02216 at 359.699 kb on + strand, within H281DRAFT_02216 at 359.699 kb on + strand, within H281DRAFT_02216 at 359.700 kb on - strand, within H281DRAFT_02216 at 359.827 kb on + strand, within H281DRAFT_02216 at 359.827 kb on + strand, within H281DRAFT_02216 at 359.859 kb on - strand, within H281DRAFT_02216 at 359.859 kb on - strand, within H281DRAFT_02216 at 359.859 kb on - strand, within H281DRAFT_02216 at 359.859 kb on - strand, within H281DRAFT_02216 at 359.886 kb on - strand, within H281DRAFT_02216 at 359.991 kb on - strand at 360.121 kb on + strand at 360.205 kb on + strand, within H281DRAFT_02217 at 360.206 kb on - strand, within H281DRAFT_02217 at 360.532 kb on + strand, within H281DRAFT_02217 at 360.565 kb on + strand, within H281DRAFT_02217 at 360.579 kb on + strand, within H281DRAFT_02217 at 360.579 kb on + strand, within H281DRAFT_02217 at 360.640 kb on + strand, within H281DRAFT_02217 at 360.667 kb on + strand, within H281DRAFT_02217 at 360.727 kb on + strand, within H281DRAFT_02217 at 360.801 kb on + strand, within H281DRAFT_02217 at 360.802 kb on - strand, within H281DRAFT_02217 at 360.802 kb on - strand, within H281DRAFT_02217 at 360.802 kb on - strand, within H281DRAFT_02217 at 360.802 kb on - strand, within H281DRAFT_02217 at 360.805 kb on + strand, within H281DRAFT_02217 at 360.805 kb on + strand, within H281DRAFT_02217 at 360.805 kb on + strand, within H281DRAFT_02217 at 360.805 kb on + strand, within H281DRAFT_02217 at 360.806 kb on - strand, within H281DRAFT_02217 at 360.806 kb on - strand, within H281DRAFT_02217 at 360.835 kb on + strand, within H281DRAFT_02217 at 360.835 kb on + strand, within H281DRAFT_02217 at 360.835 kb on + strand, within H281DRAFT_02217 at 360.835 kb on + strand, within H281DRAFT_02217 at 360.836 kb on - strand, within H281DRAFT_02217 at 360.836 kb on - strand, within H281DRAFT_02217 at 360.989 kb on + strand, within H281DRAFT_02217 at 360.989 kb on + strand, within H281DRAFT_02217 at 360.990 kb on - strand, within H281DRAFT_02217 at 361.054 kb on + strand, within H281DRAFT_02217 at 361.195 kb on + strand, within H281DRAFT_02217 at 361.196 kb on - strand, within H281DRAFT_02217 at 361.208 kb on - strand, within H281DRAFT_02217 at 361.265 kb on - strand at 361.265 kb on - strand at 361.404 kb on + strand at 361.404 kb on + strand at 361.405 kb on - strand at 361.405 kb on - strand at 361.405 kb on - strand at 361.619 kb on + strand, within H281DRAFT_02218 at 361.619 kb on + strand at 361.620 kb on - strand at 361.620 kb on - strand, within H281DRAFT_02218 at 361.652 kb on - strand at 361.652 kb on - strand, within H281DRAFT_02218 at 361.652 kb on - strand, within H281DRAFT_02218 at 361.850 kb on + strand, within H281DRAFT_02218 at 361.851 kb on - strand, within H281DRAFT_02218 at 361.895 kb on + strand, within H281DRAFT_02218 at 361.896 kb on - strand, within H281DRAFT_02218 at 362.004 kb on + strand, within H281DRAFT_02218 at 362.004 kb on + strand, within H281DRAFT_02218 at 362.005 kb on - strand, within H281DRAFT_02218 at 362.005 kb on - strand, within H281DRAFT_02218 at 362.006 kb on + strand, within H281DRAFT_02218 at 362.007 kb on - strand, within H281DRAFT_02218 at 362.205 kb on + strand at 362.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C) remove 359,183 + H281DRAFT_02216 0.36 +0.3 359,183 + H281DRAFT_02216 0.36 +0.1 359,183 + -1.1 359,184 - H281DRAFT_02216 0.36 +0.4 359,199 + H281DRAFT_02216 0.37 +2.2 359,199 + H281DRAFT_02216 0.37 -1.0 359,200 - H281DRAFT_02216 0.38 -0.4 359,200 - H281DRAFT_02216 0.38 -0.1 359,200 - H281DRAFT_02216 0.38 +0.2 359,202 + H281DRAFT_02216 0.38 +0.2 359,699 + H281DRAFT_02216 0.73 -0.0 359,699 + H281DRAFT_02216 0.73 +0.2 359,699 + H281DRAFT_02216 0.73 +0.2 359,699 + H281DRAFT_02216 0.73 -1.2 359,700 - H281DRAFT_02216 0.73 +0.0 359,827 + H281DRAFT_02216 0.83 -0.0 359,827 + H281DRAFT_02216 0.83 -0.3 359,859 - H281DRAFT_02216 0.85 -1.0 359,859 - H281DRAFT_02216 0.85 +0.4 359,859 - H281DRAFT_02216 0.85 -0.1 359,859 - H281DRAFT_02216 0.85 -0.0 359,886 - H281DRAFT_02216 0.87 -0.2 359,991 - -0.0 360,121 + +0.5 360,205 + H281DRAFT_02217 0.11 -0.0 360,206 - H281DRAFT_02217 0.11 -0.9 360,532 + H281DRAFT_02217 0.36 +0.2 360,565 + H281DRAFT_02217 0.39 -0.0 360,579 + H281DRAFT_02217 0.40 +0.3 360,579 + H281DRAFT_02217 0.40 -0.2 360,640 + H281DRAFT_02217 0.45 +0.6 360,667 + H281DRAFT_02217 0.47 +0.1 360,727 + H281DRAFT_02217 0.51 -0.5 360,801 + H281DRAFT_02217 0.57 +2.8 360,802 - H281DRAFT_02217 0.57 -0.7 360,802 - H281DRAFT_02217 0.57 +1.2 360,802 - H281DRAFT_02217 0.57 -0.1 360,802 - H281DRAFT_02217 0.57 -0.5 360,805 + H281DRAFT_02217 0.57 -0.4 360,805 + H281DRAFT_02217 0.57 +0.3 360,805 + H281DRAFT_02217 0.57 -0.1 360,805 + H281DRAFT_02217 0.57 -0.2 360,806 - H281DRAFT_02217 0.58 +0.2 360,806 - H281DRAFT_02217 0.58 -0.8 360,835 + H281DRAFT_02217 0.60 -0.4 360,835 + H281DRAFT_02217 0.60 -0.5 360,835 + H281DRAFT_02217 0.60 -0.4 360,835 + H281DRAFT_02217 0.60 +1.2 360,836 - H281DRAFT_02217 0.60 +0.2 360,836 - H281DRAFT_02217 0.60 -0.4 360,989 + H281DRAFT_02217 0.72 -0.0 360,989 + H281DRAFT_02217 0.72 -0.1 360,990 - H281DRAFT_02217 0.72 +0.3 361,054 + H281DRAFT_02217 0.77 +0.4 361,195 + H281DRAFT_02217 0.88 -0.3 361,196 - H281DRAFT_02217 0.88 -0.6 361,208 - H281DRAFT_02217 0.89 -0.6 361,265 - +0.3 361,265 - -0.0 361,404 + -0.3 361,404 + +1.0 361,405 - +1.2 361,405 - +0.6 361,405 - -0.6 361,619 + H281DRAFT_02218 0.23 -0.0 361,619 + +4.0 361,620 - +2.2 361,620 - H281DRAFT_02218 0.23 +0.5 361,652 - +2.8 361,652 - H281DRAFT_02218 0.27 +1.8 361,652 - H281DRAFT_02218 0.27 -0.4 361,850 + H281DRAFT_02218 0.52 -0.5 361,851 - H281DRAFT_02218 0.53 +1.1 361,895 + H281DRAFT_02218 0.58 +1.0 361,896 - H281DRAFT_02218 0.58 -0.3 362,004 + H281DRAFT_02218 0.72 +1.2 362,004 + H281DRAFT_02218 0.72 -1.2 362,005 - H281DRAFT_02218 0.72 -0.5 362,005 - H281DRAFT_02218 0.72 -0.5 362,006 + H281DRAFT_02218 0.72 +0.0 362,007 - H281DRAFT_02218 0.73 -0.4 362,205 + -1.9 362,346 + +0.5
Or see this region's nucleotide sequence