Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00441

Experiment: D-Glucose 20 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00439 and H281DRAFT_00440 are separated by 2 nucleotidesH281DRAFT_00440 and H281DRAFT_00441 are separated by 97 nucleotidesH281DRAFT_00441 and H281DRAFT_00442 are separated by 174 nucleotides H281DRAFT_00439: H281DRAFT_00439 - Uncharacterized membrane protein, at 482,787 to 483,362 _00439 H281DRAFT_00440: H281DRAFT_00440 - hypothetical protein, at 483,365 to 484,171 _00440 H281DRAFT_00441: H281DRAFT_00441 - hypothetical protein, at 484,269 to 484,757 _00441 H281DRAFT_00442: H281DRAFT_00442 - MFS transporter, MHS family, proline/betaine transporter, at 484,932 to 486,401 _00442 Position (kb) 484 485Strain fitness (log2 ratio) -1 0 1 2at 483.587 kb on + strand, within H281DRAFT_00440at 483.587 kb on + strand, within H281DRAFT_00440at 483.587 kb on + strand, within H281DRAFT_00440at 483.588 kb on - strand, within H281DRAFT_00440at 483.588 kb on - strand, within H281DRAFT_00440at 483.588 kb on - strand, within H281DRAFT_00440at 483.588 kb on - strand, within H281DRAFT_00440at 484.035 kb on - strand, within H281DRAFT_00440at 484.460 kb on + strand, within H281DRAFT_00441at 484.461 kb on - strand, within H281DRAFT_00441at 484.493 kb on + strand, within H281DRAFT_00441at 484.788 kb on + strandat 484.788 kb on + strandat 484.805 kb on + strandat 484.961 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C)
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483,587 + H281DRAFT_00440 0.28 +0.2
483,587 + H281DRAFT_00440 0.28 -0.3
483,587 + H281DRAFT_00440 0.28 +0.4
483,588 - H281DRAFT_00440 0.28 +0.6
483,588 - H281DRAFT_00440 0.28 -0.5
483,588 - H281DRAFT_00440 0.28 -0.4
483,588 - H281DRAFT_00440 0.28 +0.7
484,035 - H281DRAFT_00440 0.83 -0.9
484,460 + H281DRAFT_00441 0.39 +1.0
484,461 - H281DRAFT_00441 0.39 -0.2
484,493 + H281DRAFT_00441 0.46 +0.8
484,788 + -1.0
484,788 + -0.0
484,805 + +2.2
484,961 - -0.6

Or see this region's nucleotide sequence