Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2912 and Dsui_2913 are separated by 92 nucleotides Dsui_2913 and Dsui_2914 are separated by 29 nucleotides Dsui_2914 and Dsui_2915 are separated by 133 nucleotides
Dsui_2912: Dsui_2912 - putative xylanase/chitin deacetylase, at 3,114,951 to 3,115,859
_2912
Dsui_2913: Dsui_2913 - dihydroxynaphthoate synthase, at 3,115,952 to 3,116,782
_2913
Dsui_2914: Dsui_2914 - cytochrome b, at 3,116,812 to 3,117,429
_2914
Dsui_2915: Dsui_2915 - o-succinylbenzoic acid synthetase, at 3,117,563 to 3,118,627
_2915
Position (kb)
3115
3116
3117 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3114.961 kb on - strand at 3115.066 kb on + strand, within Dsui_2912 at 3115.140 kb on + strand, within Dsui_2912 at 3115.164 kb on + strand, within Dsui_2912 at 3115.169 kb on + strand, within Dsui_2912 at 3115.177 kb on - strand at 3115.177 kb on - strand, within Dsui_2912 at 3115.177 kb on - strand, within Dsui_2912 at 3115.298 kb on + strand, within Dsui_2912 at 3115.302 kb on - strand at 3115.451 kb on - strand, within Dsui_2912 at 3115.498 kb on + strand, within Dsui_2912 at 3115.666 kb on + strand, within Dsui_2912 at 3115.803 kb on + strand at 3115.959 kb on + strand at 3115.977 kb on - strand at 3116.040 kb on - strand, within Dsui_2913 at 3116.184 kb on + strand, within Dsui_2913 at 3116.278 kb on + strand, within Dsui_2913 at 3116.335 kb on + strand, within Dsui_2913 at 3116.399 kb on - strand at 3116.509 kb on - strand at 3116.512 kb on + strand, within Dsui_2913 at 3116.682 kb on + strand, within Dsui_2913 at 3116.832 kb on + strand at 3116.883 kb on - strand, within Dsui_2914 at 3116.950 kb on - strand at 3116.955 kb on - strand at 3116.984 kb on - strand, within Dsui_2914 at 3116.997 kb on + strand at 3117.098 kb on + strand at 3117.162 kb on + strand at 3117.492 kb on - strand at 3117.555 kb on - strand at 3117.596 kb on + strand at 3117.665 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 3,114,961 - -2.0 3,115,066 + Dsui_2912 0.13 +1.7 3,115,140 + Dsui_2912 0.21 +0.7 3,115,164 + Dsui_2912 0.23 +1.5 3,115,169 + Dsui_2912 0.24 +1.7 3,115,177 - -0.3 3,115,177 - Dsui_2912 0.25 +0.1 3,115,177 - Dsui_2912 0.25 -1.7 3,115,298 + Dsui_2912 0.38 +0.2 3,115,302 - -1.7 3,115,451 - Dsui_2912 0.55 -0.5 3,115,498 + Dsui_2912 0.60 +0.3 3,115,666 + Dsui_2912 0.79 +1.1 3,115,803 + +0.6 3,115,959 + +1.5 3,115,977 - -0.6 3,116,040 - Dsui_2913 0.11 -0.6 3,116,184 + Dsui_2913 0.28 +1.0 3,116,278 + Dsui_2913 0.39 +0.7 3,116,335 + Dsui_2913 0.46 +1.1 3,116,399 - -1.5 3,116,509 - +2.0 3,116,512 + Dsui_2913 0.67 +2.3 3,116,682 + Dsui_2913 0.88 +1.1 3,116,832 + -2.0 3,116,883 - Dsui_2914 0.11 -0.6 3,116,950 - -3.0 3,116,955 - -0.5 3,116,984 - Dsui_2914 0.28 +0.5 3,116,997 + -2.5 3,117,098 + -0.5 3,117,162 + -3.0 3,117,492 - +0.5 3,117,555 - -2.4 3,117,596 + +1.5 3,117,665 - -1.9
Or see this region's nucleotide sequence