Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2484 and Dsui_2485 are separated by 33 nucleotides Dsui_2485 and Dsui_2486 overlap by 4 nucleotides Dsui_2486 and Dsui_2487 are separated by 159 nucleotides
Dsui_2484: Dsui_2484 - hydroxyacylglutathione hydrolase, at 2,633,740 to 2,634,543
_2484
Dsui_2485: Dsui_2485 - response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 2,634,577 to 2,634,942
_2485
Dsui_2486: Dsui_2486 - diguanylate cyclase (GGDEF) domain-containing protein, at 2,634,939 to 2,635,901
_2486
Dsui_2487: Dsui_2487 - hypothetical protein, at 2,636,061 to 2,637,569
_2487
Position (kb)
2634
2635
2636 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2634.129 kb on + strand, within Dsui_2484 at 2634.142 kb on + strand, within Dsui_2484 at 2634.379 kb on - strand, within Dsui_2484 at 2634.404 kb on + strand, within Dsui_2484 at 2634.515 kb on + strand at 2634.537 kb on + strand at 2634.611 kb on + strand at 2634.656 kb on - strand, within Dsui_2485 at 2634.659 kb on + strand, within Dsui_2485 at 2634.708 kb on + strand, within Dsui_2485 at 2634.716 kb on - strand, within Dsui_2485 at 2634.740 kb on - strand, within Dsui_2485 at 2634.779 kb on - strand, within Dsui_2485 at 2635.082 kb on + strand, within Dsui_2486 at 2635.261 kb on + strand, within Dsui_2486 at 2635.308 kb on - strand, within Dsui_2486 at 2635.313 kb on - strand, within Dsui_2486 at 2635.493 kb on + strand, within Dsui_2486 at 2635.517 kb on + strand, within Dsui_2486 at 2635.550 kb on - strand, within Dsui_2486 at 2635.602 kb on + strand, within Dsui_2486 at 2635.726 kb on - strand, within Dsui_2486 at 2635.728 kb on - strand, within Dsui_2486 at 2635.765 kb on - strand, within Dsui_2486 at 2635.785 kb on - strand, within Dsui_2486 at 2635.812 kb on - strand at 2635.869 kb on + strand at 2635.878 kb on - strand at 2635.894 kb on - strand at 2635.924 kb on - strand at 2636.102 kb on + strand at 2636.281 kb on + strand, within Dsui_2487 at 2636.298 kb on + strand, within Dsui_2487 at 2636.351 kb on + strand, within Dsui_2487 at 2636.359 kb on - strand, within Dsui_2487 at 2636.366 kb on + strand, within Dsui_2487 at 2636.519 kb on + strand, within Dsui_2487 at 2636.559 kb on + strand, within Dsui_2487 at 2636.651 kb on + strand, within Dsui_2487 at 2636.659 kb on - strand at 2636.683 kb on + strand, within Dsui_2487 at 2636.683 kb on + strand, within Dsui_2487 at 2636.728 kb on + strand, within Dsui_2487
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 2,634,129 + Dsui_2484 0.48 -0.4 2,634,142 + Dsui_2484 0.50 -1.0 2,634,379 - Dsui_2484 0.79 -0.7 2,634,404 + Dsui_2484 0.83 -0.2 2,634,515 + +0.5 2,634,537 + +1.0 2,634,611 + +0.3 2,634,656 - Dsui_2485 0.22 +0.7 2,634,659 + Dsui_2485 0.22 -1.1 2,634,708 + Dsui_2485 0.36 +0.1 2,634,716 - Dsui_2485 0.38 -0.3 2,634,740 - Dsui_2485 0.45 +0.3 2,634,779 - Dsui_2485 0.55 +0.9 2,635,082 + Dsui_2486 0.15 -1.8 2,635,261 + Dsui_2486 0.33 -2.7 2,635,308 - Dsui_2486 0.38 -0.2 2,635,313 - Dsui_2486 0.39 +0.5 2,635,493 + Dsui_2486 0.58 -1.6 2,635,517 + Dsui_2486 0.60 -3.0 2,635,550 - Dsui_2486 0.63 +0.0 2,635,602 + Dsui_2486 0.69 -1.3 2,635,726 - Dsui_2486 0.82 -0.1 2,635,728 - Dsui_2486 0.82 +0.7 2,635,765 - Dsui_2486 0.86 +2.5 2,635,785 - Dsui_2486 0.88 -0.4 2,635,812 - +1.5 2,635,869 + -0.1 2,635,878 - +0.7 2,635,894 - +1.3 2,635,924 - +0.8 2,636,102 + -0.2 2,636,281 + Dsui_2487 0.15 -2.8 2,636,298 + Dsui_2487 0.16 -1.6 2,636,351 + Dsui_2487 0.19 +0.3 2,636,359 - Dsui_2487 0.20 +0.0 2,636,366 + Dsui_2487 0.20 +0.4 2,636,519 + Dsui_2487 0.30 +1.4 2,636,559 + Dsui_2487 0.33 -0.3 2,636,651 + Dsui_2487 0.39 +0.8 2,636,659 - -0.8 2,636,683 + Dsui_2487 0.41 -0.4 2,636,683 + Dsui_2487 0.41 -0.9 2,636,728 + Dsui_2487 0.44 -0.1
Or see this region's nucleotide sequence