Strain Fitness in Dechlorosoma suillum PS around Dsui_2451

Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2450 and Dsui_2451 are separated by 62 nucleotidesDsui_2451 and Dsui_2452 overlap by 23 nucleotides Dsui_2450: Dsui_2450 - beta-ketoacyl-acyl-carrier-protein synthase II, at 2,608,588 to 2,609,820 _2450 Dsui_2451: Dsui_2451 - hypothetical protein, at 2,609,883 to 2,610,284 _2451 Dsui_2452: Dsui_2452 - L-aspartate oxidase, at 2,610,262 to 2,611,839 _2452 Position (kb) 2609 2610 2611Strain fitness (log2 ratio) -1 0 1 2at 2609.833 kb on + strandat 2609.888 kb on + strandat 2609.895 kb on + strandat 2609.961 kb on - strand, within Dsui_2451at 2609.969 kb on - strand, within Dsui_2451at 2609.982 kb on + strand, within Dsui_2451at 2610.007 kb on + strand, within Dsui_2451at 2610.056 kb on + strand, within Dsui_2451at 2610.064 kb on - strand, within Dsui_2451at 2610.064 kb on - strand, within Dsui_2451at 2610.175 kb on + strand, within Dsui_2451

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Per-strain Table

Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
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2,609,833 + +1.2
2,609,888 + +1.3
2,609,895 + +1.2
2,609,961 - Dsui_2451 0.19 +0.7
2,609,969 - Dsui_2451 0.21 +0.5
2,609,982 + Dsui_2451 0.25 +0.9
2,610,007 + Dsui_2451 0.31 +1.0
2,610,056 + Dsui_2451 0.43 +0.9
2,610,064 - Dsui_2451 0.45 +0.7
2,610,064 - Dsui_2451 0.45 -0.7
2,610,175 + Dsui_2451 0.73 +2.2

Or see this region's nucleotide sequence