Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2419 and Dsui_2420 are separated by 99 nucleotides Dsui_2420 and Dsui_2421 overlap by 35 nucleotides
Dsui_2419: Dsui_2419 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,574,539 to 2,577,538
_2419
Dsui_2420: Dsui_2420 - uncharacterized radical SAM protein YgiQ, at 2,577,638 to 2,579,956
_2420
Dsui_2421: Dsui_2421 - EAL domain-containing protein, at 2,579,922 to 2,581,223
_2421
Position (kb)
2577
2578
2579
2580 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2576.660 kb on - strand at 2576.692 kb on - strand, within Dsui_2419 at 2576.710 kb on + strand, within Dsui_2419 at 2576.756 kb on + strand, within Dsui_2419 at 2577.088 kb on + strand, within Dsui_2419 at 2577.169 kb on + strand, within Dsui_2419 at 2577.189 kb on + strand, within Dsui_2419 at 2577.207 kb on + strand, within Dsui_2419 at 2577.328 kb on - strand at 2577.424 kb on + strand at 2577.447 kb on + strand at 2577.450 kb on - strand at 2577.533 kb on + strand at 2577.597 kb on + strand at 2577.646 kb on + strand at 2577.693 kb on + strand at 2577.761 kb on + strand at 2577.809 kb on + strand at 2577.840 kb on - strand at 2577.881 kb on + strand, within Dsui_2420 at 2577.896 kb on + strand, within Dsui_2420 at 2577.906 kb on + strand, within Dsui_2420 at 2577.948 kb on - strand at 2578.185 kb on - strand at 2578.370 kb on + strand, within Dsui_2420 at 2578.370 kb on + strand, within Dsui_2420 at 2578.419 kb on + strand, within Dsui_2420 at 2578.449 kb on + strand, within Dsui_2420 at 2578.565 kb on - strand at 2578.641 kb on + strand, within Dsui_2420 at 2578.648 kb on - strand at 2578.665 kb on - strand, within Dsui_2420 at 2578.689 kb on - strand at 2578.735 kb on - strand, within Dsui_2420 at 2578.738 kb on + strand, within Dsui_2420 at 2578.739 kb on + strand, within Dsui_2420 at 2578.899 kb on + strand, within Dsui_2420 at 2578.922 kb on - strand at 2578.964 kb on + strand, within Dsui_2420 at 2578.980 kb on + strand, within Dsui_2420 at 2579.031 kb on + strand, within Dsui_2420 at 2579.043 kb on + strand, within Dsui_2420 at 2579.079 kb on - strand at 2579.085 kb on + strand, within Dsui_2420 at 2579.341 kb on + strand, within Dsui_2420 at 2579.397 kb on - strand, within Dsui_2420 at 2579.451 kb on - strand, within Dsui_2420 at 2579.459 kb on + strand, within Dsui_2420 at 2579.467 kb on - strand at 2579.479 kb on + strand, within Dsui_2420 at 2579.480 kb on + strand, within Dsui_2420 at 2579.544 kb on + strand, within Dsui_2420 at 2579.552 kb on - strand, within Dsui_2420 at 2579.615 kb on + strand, within Dsui_2420 at 2579.914 kb on + strand at 2579.925 kb on + strand at 2579.928 kb on - strand at 2579.975 kb on + strand at 2580.005 kb on + strand at 2580.028 kb on - strand at 2580.033 kb on - strand at 2580.041 kb on + strand at 2580.111 kb on - strand, within Dsui_2421 at 2580.193 kb on - strand, within Dsui_2421 at 2580.251 kb on + strand, within Dsui_2421 at 2580.251 kb on + strand, within Dsui_2421 at 2580.254 kb on - strand, within Dsui_2421 at 2580.259 kb on - strand, within Dsui_2421 at 2580.263 kb on + strand, within Dsui_2421 at 2580.281 kb on - strand, within Dsui_2421 at 2580.291 kb on + strand, within Dsui_2421 at 2580.318 kb on - strand, within Dsui_2421 at 2580.323 kb on + strand, within Dsui_2421 at 2580.355 kb on - strand, within Dsui_2421 at 2580.383 kb on + strand, within Dsui_2421 at 2580.391 kb on - strand, within Dsui_2421 at 2580.406 kb on + strand, within Dsui_2421 at 2580.414 kb on - strand, within Dsui_2421 at 2580.427 kb on - strand, within Dsui_2421 at 2580.501 kb on - strand, within Dsui_2421 at 2580.502 kb on + strand, within Dsui_2421 at 2580.539 kb on - strand, within Dsui_2421 at 2580.642 kb on - strand, within Dsui_2421 at 2580.695 kb on - strand, within Dsui_2421 at 2580.738 kb on + strand, within Dsui_2421 at 2580.809 kb on - strand, within Dsui_2421 at 2580.841 kb on - strand, within Dsui_2421 at 2580.937 kb on - strand, within Dsui_2421
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 2,576,660 - -2.8 2,576,692 - Dsui_2419 0.72 -3.3 2,576,710 + Dsui_2419 0.72 +0.7 2,576,756 + Dsui_2419 0.74 +0.8 2,577,088 + Dsui_2419 0.85 +1.2 2,577,169 + Dsui_2419 0.88 +0.5 2,577,189 + Dsui_2419 0.88 +1.3 2,577,207 + Dsui_2419 0.89 +1.1 2,577,328 - -3.3 2,577,424 + +1.5 2,577,447 + +0.9 2,577,450 - -1.9 2,577,533 + -0.3 2,577,597 + +1.5 2,577,646 + +0.7 2,577,693 + +0.7 2,577,761 + +0.2 2,577,809 + +0.6 2,577,840 - -0.6 2,577,881 + Dsui_2420 0.10 +0.8 2,577,896 + Dsui_2420 0.11 +0.9 2,577,906 + Dsui_2420 0.12 +1.4 2,577,948 - +1.7 2,578,185 - -1.6 2,578,370 + Dsui_2420 0.32 +1.9 2,578,370 + Dsui_2420 0.32 +0.8 2,578,419 + Dsui_2420 0.34 +1.5 2,578,449 + Dsui_2420 0.35 +1.0 2,578,565 - -2.4 2,578,641 + Dsui_2420 0.43 +0.8 2,578,648 - +0.1 2,578,665 - Dsui_2420 0.44 +0.1 2,578,689 - -0.4 2,578,735 - Dsui_2420 0.47 -0.1 2,578,738 + Dsui_2420 0.47 +0.6 2,578,739 + Dsui_2420 0.47 +0.7 2,578,899 + Dsui_2420 0.54 +0.8 2,578,922 - +3.7 2,578,964 + Dsui_2420 0.57 +1.0 2,578,980 + Dsui_2420 0.58 +0.2 2,579,031 + Dsui_2420 0.60 +1.5 2,579,043 + Dsui_2420 0.61 +0.4 2,579,079 - +0.3 2,579,085 + Dsui_2420 0.62 +1.1 2,579,341 + Dsui_2420 0.73 +0.8 2,579,397 - Dsui_2420 0.76 -1.6 2,579,451 - Dsui_2420 0.78 -0.1 2,579,459 + Dsui_2420 0.79 +1.3 2,579,467 - -1.0 2,579,479 + Dsui_2420 0.79 +0.9 2,579,480 + Dsui_2420 0.79 +0.4 2,579,544 + Dsui_2420 0.82 +0.8 2,579,552 - Dsui_2420 0.83 +0.2 2,579,615 + Dsui_2420 0.85 -0.0 2,579,914 + +0.9 2,579,925 + +1.1 2,579,928 - +0.7 2,579,975 + +0.6 2,580,005 + +0.8 2,580,028 - +1.2 2,580,033 - -0.2 2,580,041 + +1.1 2,580,111 - Dsui_2421 0.15 -0.6 2,580,193 - Dsui_2421 0.21 +0.7 2,580,251 + Dsui_2421 0.25 +0.1 2,580,251 + Dsui_2421 0.25 +0.8 2,580,254 - Dsui_2421 0.25 +1.1 2,580,259 - Dsui_2421 0.26 +1.3 2,580,263 + Dsui_2421 0.26 +0.6 2,580,281 - Dsui_2421 0.28 +0.5 2,580,291 + Dsui_2421 0.28 +0.7 2,580,318 - Dsui_2421 0.30 +1.1 2,580,323 + Dsui_2421 0.31 +1.3 2,580,355 - Dsui_2421 0.33 +1.1 2,580,383 + Dsui_2421 0.35 +1.3 2,580,391 - Dsui_2421 0.36 +1.0 2,580,406 + Dsui_2421 0.37 +0.9 2,580,414 - Dsui_2421 0.38 +0.6 2,580,427 - Dsui_2421 0.39 +0.8 2,580,501 - Dsui_2421 0.44 +1.1 2,580,502 + Dsui_2421 0.45 +0.3 2,580,539 - Dsui_2421 0.47 +0.6 2,580,642 - Dsui_2421 0.55 -0.1 2,580,695 - Dsui_2421 0.59 +0.8 2,580,738 + Dsui_2421 0.63 +0.5 2,580,809 - Dsui_2421 0.68 -1.1 2,580,841 - Dsui_2421 0.71 +1.7 2,580,937 - Dsui_2421 0.78 +2.7
Or see this region's nucleotide sequence