Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2362 and Dsui_2363 are separated by 27 nucleotides Dsui_2363 and Dsui_2364 are separated by 185 nucleotides Dsui_2364 and Dsui_2365 are separated by 0 nucleotides
Dsui_2362: Dsui_2362 - surface antigen family protein, at 2,512,747 to 2,513,331
_2362
Dsui_2363: Dsui_2363 - hypothetical protein, at 2,513,359 to 2,513,580
_2363
Dsui_2364: Dsui_2364 - ABC-type sugar transport system, periplasmic component, at 2,513,766 to 2,514,707
_2364
Dsui_2365: Dsui_2365 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,514,708 to 2,517,632
_2365
Position (kb)
2513
2514
2515 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2513.092 kb on + strand at 2513.145 kb on - strand at 2513.313 kb on + strand at 2513.335 kb on + strand at 2513.366 kb on + strand at 2513.490 kb on - strand at 2513.550 kb on + strand, within Dsui_2363 at 2513.555 kb on + strand, within Dsui_2363 at 2513.565 kb on + strand at 2513.798 kb on + strand at 2513.819 kb on + strand at 2513.821 kb on - strand at 2513.875 kb on + strand, within Dsui_2364 at 2513.877 kb on + strand, within Dsui_2364 at 2513.910 kb on + strand at 2514.031 kb on + strand at 2514.094 kb on - strand at 2514.101 kb on - strand at 2514.156 kb on + strand, within Dsui_2364 at 2514.162 kb on - strand at 2514.190 kb on - strand at 2514.271 kb on + strand, within Dsui_2364 at 2514.337 kb on + strand, within Dsui_2364 at 2514.337 kb on + strand, within Dsui_2364 at 2514.457 kb on + strand, within Dsui_2364 at 2514.457 kb on + strand, within Dsui_2364 at 2514.491 kb on - strand at 2514.520 kb on + strand, within Dsui_2364 at 2514.564 kb on + strand, within Dsui_2364 at 2514.571 kb on + strand, within Dsui_2364 at 2514.791 kb on + strand at 2514.894 kb on + strand at 2514.955 kb on + strand at 2514.963 kb on - strand at 2515.015 kb on - strand at 2515.075 kb on + strand at 2515.081 kb on - strand at 2515.083 kb on + strand, within Dsui_2365 at 2515.110 kb on + strand, within Dsui_2365 at 2515.198 kb on - strand, within Dsui_2365 at 2515.281 kb on + strand, within Dsui_2365 at 2515.361 kb on + strand, within Dsui_2365 at 2515.414 kb on - strand at 2515.468 kb on + strand, within Dsui_2365 at 2515.494 kb on - strand at 2515.593 kb on - strand at 2515.625 kb on + strand at 2515.630 kb on + strand, within Dsui_2365
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 2,513,092 + -1.3 2,513,145 - -1.7 2,513,313 + -1.1 2,513,335 + -1.0 2,513,366 + -3.8 2,513,490 - -1.8 2,513,550 + Dsui_2363 0.86 -1.1 2,513,555 + Dsui_2363 0.88 +1.7 2,513,565 + -0.7 2,513,798 + +0.7 2,513,819 + +2.4 2,513,821 - -2.4 2,513,875 + Dsui_2364 0.12 +0.9 2,513,877 + Dsui_2364 0.12 +0.3 2,513,910 + -1.3 2,514,031 + -0.3 2,514,094 - +0.9 2,514,101 - -2.4 2,514,156 + Dsui_2364 0.41 +1.4 2,514,162 - -0.3 2,514,190 - -0.3 2,514,271 + Dsui_2364 0.54 -0.3 2,514,337 + Dsui_2364 0.61 -0.8 2,514,337 + Dsui_2364 0.61 -1.1 2,514,457 + Dsui_2364 0.73 +0.0 2,514,457 + Dsui_2364 0.73 +0.2 2,514,491 - -1.5 2,514,520 + Dsui_2364 0.80 -0.6 2,514,564 + Dsui_2364 0.85 +0.9 2,514,571 + Dsui_2364 0.85 +1.5 2,514,791 + -0.3 2,514,894 + +0.5 2,514,955 + -1.8 2,514,963 - -2.3 2,515,015 - -0.3 2,515,075 + +0.6 2,515,081 - -1.8 2,515,083 + Dsui_2365 0.13 +1.8 2,515,110 + Dsui_2365 0.14 -0.1 2,515,198 - Dsui_2365 0.17 +1.1 2,515,281 + Dsui_2365 0.20 -1.0 2,515,361 + Dsui_2365 0.22 -3.0 2,515,414 - +1.1 2,515,468 + Dsui_2365 0.26 -1.5 2,515,494 - -1.5 2,515,593 - -1.5 2,515,625 + -2.5 2,515,630 + Dsui_2365 0.32 -3.3
Or see this region's nucleotide sequence