Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2358 and Dsui_2359 are separated by 39 nucleotides Dsui_2359 and Dsui_2360 are separated by 2 nucleotides Dsui_2360 and Dsui_2361 are separated by 225 nucleotides Dsui_2361 and Dsui_2362 are separated by 27 nucleotides
Dsui_2358: Dsui_2358 - signal transduction histidine kinase, at 2,508,866 to 2,510,302
_2358
Dsui_2359: Dsui_2359 - hypothetical protein, at 2,510,342 to 2,510,794
_2359
Dsui_2360: Dsui_2360 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 2,510,797 to 2,512,158
_2360
Dsui_2361: Dsui_2361 - hypothetical protein, at 2,512,384 to 2,512,719
_2361
Dsui_2362: Dsui_2362 - surface antigen family protein, at 2,512,747 to 2,513,331
_2362
Position (kb)
2510
2511
2512
2513 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2509.808 kb on + strand, within Dsui_2358 at 2510.000 kb on + strand, within Dsui_2358 at 2510.012 kb on + strand at 2510.036 kb on + strand, within Dsui_2358 at 2510.127 kb on + strand, within Dsui_2358 at 2510.321 kb on + strand at 2510.466 kb on - strand at 2510.516 kb on + strand, within Dsui_2359 at 2510.599 kb on + strand, within Dsui_2359 at 2510.668 kb on + strand, within Dsui_2359 at 2510.672 kb on - strand at 2510.802 kb on - strand at 2510.975 kb on + strand, within Dsui_2360 at 2511.202 kb on + strand, within Dsui_2360 at 2511.404 kb on + strand, within Dsui_2360 at 2511.404 kb on + strand, within Dsui_2360 at 2511.448 kb on + strand, within Dsui_2360 at 2511.468 kb on + strand, within Dsui_2360 at 2511.684 kb on - strand at 2511.811 kb on - strand at 2511.885 kb on + strand, within Dsui_2360 at 2511.978 kb on + strand, within Dsui_2360 at 2512.033 kb on + strand at 2512.077 kb on - strand at 2512.427 kb on + strand at 2512.427 kb on + strand at 2512.432 kb on + strand at 2512.432 kb on + strand at 2512.437 kb on + strand at 2512.437 kb on + strand at 2512.445 kb on - strand at 2512.445 kb on - strand at 2513.092 kb on + strand at 2513.145 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 2,509,808 + Dsui_2358 0.66 +1.7 2,510,000 + Dsui_2358 0.79 +0.1 2,510,012 + -2.0 2,510,036 + Dsui_2358 0.81 +0.6 2,510,127 + Dsui_2358 0.88 -1.4 2,510,321 + -0.3 2,510,466 - -0.3 2,510,516 + Dsui_2359 0.38 +1.6 2,510,599 + Dsui_2359 0.57 +1.1 2,510,668 + Dsui_2359 0.72 +0.0 2,510,672 - -2.8 2,510,802 - +0.2 2,510,975 + Dsui_2360 0.13 +2.1 2,511,202 + Dsui_2360 0.30 +2.4 2,511,404 + Dsui_2360 0.45 +1.5 2,511,404 + Dsui_2360 0.45 +0.9 2,511,448 + Dsui_2360 0.48 +0.8 2,511,468 + Dsui_2360 0.49 +0.9 2,511,684 - -1.4 2,511,811 - +0.5 2,511,885 + Dsui_2360 0.80 +1.1 2,511,978 + Dsui_2360 0.87 +1.0 2,512,033 + +0.6 2,512,077 - +0.6 2,512,427 + -3.5 2,512,427 + -1.7 2,512,432 + +4.4 2,512,432 + +1.7 2,512,437 + -1.3 2,512,437 + +0.2 2,512,445 - -2.5 2,512,445 - -1.8 2,513,092 + -1.3 2,513,145 - -1.7
Or see this region's nucleotide sequence