Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2142 and Dsui_2143 are separated by 202 nucleotides Dsui_2143 and Dsui_2144 are separated by 276 nucleotides Dsui_2144 and Dsui_2145 are separated by 213 nucleotides
Dsui_2142: Dsui_2142 - Protein of unknown function (DUF2894), at 2,271,236 to 2,272,111
_2142
Dsui_2143: Dsui_2143 - hypothetical protein, at 2,272,314 to 2,272,856
_2143
Dsui_2144: Dsui_2144 - tRNA-Ser, at 2,273,133 to 2,273,220
_2144
Dsui_2145: Dsui_2145 - FtsH-interacting integral membrane protein, at 2,273,434 to 2,274,126
_2145
Position (kb)
2272
2273 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2271.866 kb on + strand, within Dsui_2142 at 2271.877 kb on + strand, within Dsui_2142 at 2271.885 kb on - strand at 2272.006 kb on + strand at 2272.019 kb on - strand at 2272.019 kb on - strand at 2272.038 kb on - strand at 2272.184 kb on - strand at 2272.263 kb on + strand at 2272.265 kb on - strand at 2272.270 kb on + strand at 2272.278 kb on - strand at 2272.442 kb on - strand at 2272.467 kb on + strand, within Dsui_2143 at 2272.472 kb on + strand, within Dsui_2143 at 2272.475 kb on - strand at 2272.520 kb on + strand, within Dsui_2143 at 2272.679 kb on - strand at 2272.738 kb on + strand, within Dsui_2143 at 2272.757 kb on - strand at 2272.872 kb on + strand at 2272.872 kb on + strand at 2272.874 kb on + strand at 2272.911 kb on + strand at 2273.274 kb on + strand at 2273.333 kb on + strand at 2273.343 kb on + strand at 2273.343 kb on + strand at 2273.351 kb on - strand at 2273.388 kb on + strand at 2273.502 kb on + strand at 2273.751 kb on + strand, within Dsui_2145
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 2,271,866 + Dsui_2142 0.72 +0.4 2,271,877 + Dsui_2142 0.73 +0.2 2,271,885 - +1.0 2,272,006 + +1.1 2,272,019 - -0.1 2,272,019 - -2.1 2,272,038 - -0.1 2,272,184 - -0.7 2,272,263 + +1.2 2,272,265 - -0.8 2,272,270 + -0.0 2,272,278 - -3.2 2,272,442 - +0.6 2,272,467 + Dsui_2143 0.28 +1.7 2,272,472 + Dsui_2143 0.29 +0.3 2,272,475 - -1.4 2,272,520 + Dsui_2143 0.38 +1.0 2,272,679 - +0.1 2,272,738 + Dsui_2143 0.78 +1.0 2,272,757 - -0.0 2,272,872 + +0.5 2,272,872 + -2.2 2,272,874 + -1.5 2,272,911 + +0.7 2,273,274 + -3.3 2,273,333 + -0.0 2,273,343 + +0.7 2,273,343 + -0.8 2,273,351 - -2.0 2,273,388 + +0.5 2,273,502 + +0.5 2,273,751 + Dsui_2145 0.46 +0.1
Or see this region's nucleotide sequence