Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1287 and Dsui_1288 are separated by 67 nucleotides Dsui_1288 and Dsui_1289 are separated by 9 nucleotides Dsui_1289 and Dsui_1290 overlap by 4 nucleotides
Dsui_1287: Dsui_1287 - hypothetical protein, at 1,346,703 to 1,351,481
_1287
Dsui_1288: Dsui_1288 - hypothetical protein, at 1,351,549 to 1,352,496
_1288
Dsui_1289: Dsui_1289 - hypothetical protein, at 1,352,506 to 1,353,204
_1289
Dsui_1290: Dsui_1290 - hypothetical protein, at 1,353,201 to 1,353,854
_1290
Position (kb)
1351
1352
1353 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1350.565 kb on + strand, within Dsui_1287 at 1350.573 kb on - strand, within Dsui_1287 at 1350.602 kb on + strand, within Dsui_1287 at 1350.648 kb on - strand, within Dsui_1287 at 1350.702 kb on + strand, within Dsui_1287 at 1350.732 kb on + strand, within Dsui_1287 at 1350.737 kb on + strand, within Dsui_1287 at 1350.737 kb on + strand, within Dsui_1287 at 1350.745 kb on - strand, within Dsui_1287 at 1350.813 kb on + strand, within Dsui_1287 at 1350.820 kb on - strand, within Dsui_1287 at 1350.981 kb on + strand, within Dsui_1287 at 1351.020 kb on - strand at 1351.072 kb on - strand at 1351.121 kb on + strand at 1351.131 kb on + strand at 1351.131 kb on + strand at 1351.131 kb on + strand at 1351.199 kb on - strand at 1351.203 kb on - strand at 1351.303 kb on - strand at 1351.342 kb on - strand at 1351.468 kb on - strand at 1351.571 kb on + strand at 1351.579 kb on - strand at 1351.579 kb on - strand at 1351.650 kb on - strand, within Dsui_1288 at 1351.706 kb on - strand, within Dsui_1288 at 1351.706 kb on - strand, within Dsui_1288 at 1351.737 kb on - strand, within Dsui_1288 at 1351.808 kb on - strand, within Dsui_1288 at 1351.863 kb on - strand, within Dsui_1288 at 1351.869 kb on + strand, within Dsui_1288 at 1351.884 kb on + strand, within Dsui_1288 at 1351.884 kb on + strand, within Dsui_1288 at 1351.906 kb on + strand, within Dsui_1288 at 1351.907 kb on + strand, within Dsui_1288 at 1351.982 kb on + strand, within Dsui_1288 at 1352.062 kb on - strand, within Dsui_1288 at 1352.118 kb on - strand, within Dsui_1288 at 1352.153 kb on - strand, within Dsui_1288 at 1352.160 kb on - strand, within Dsui_1288 at 1352.170 kb on - strand, within Dsui_1288 at 1352.292 kb on + strand, within Dsui_1288 at 1352.292 kb on + strand, within Dsui_1288 at 1352.324 kb on - strand, within Dsui_1288 at 1352.339 kb on + strand, within Dsui_1288 at 1352.354 kb on + strand, within Dsui_1288 at 1352.354 kb on + strand, within Dsui_1288 at 1352.355 kb on - strand, within Dsui_1288 at 1352.362 kb on - strand, within Dsui_1288 at 1352.368 kb on - strand, within Dsui_1288 at 1352.428 kb on + strand at 1352.460 kb on - strand at 1352.465 kb on - strand at 1352.490 kb on + strand at 1352.498 kb on - strand at 1352.498 kb on - strand at 1352.503 kb on + strand at 1352.623 kb on + strand, within Dsui_1289 at 1352.638 kb on + strand, within Dsui_1289 at 1352.661 kb on + strand, within Dsui_1289 at 1352.661 kb on + strand, within Dsui_1289 at 1352.661 kb on + strand, within Dsui_1289 at 1352.661 kb on + strand, within Dsui_1289 at 1352.661 kb on + strand, within Dsui_1289 at 1352.661 kb on + strand, within Dsui_1289 at 1352.661 kb on + strand, within Dsui_1289 at 1352.664 kb on - strand, within Dsui_1289 at 1352.669 kb on - strand, within Dsui_1289 at 1352.669 kb on - strand, within Dsui_1289 at 1352.669 kb on - strand, within Dsui_1289 at 1352.669 kb on - strand, within Dsui_1289 at 1352.811 kb on - strand, within Dsui_1289 at 1352.826 kb on - strand, within Dsui_1289 at 1352.831 kb on - strand, within Dsui_1289 at 1352.838 kb on + strand, within Dsui_1289 at 1352.885 kb on + strand, within Dsui_1289 at 1352.914 kb on - strand, within Dsui_1289 at 1352.925 kb on + strand, within Dsui_1289 at 1352.933 kb on - strand, within Dsui_1289 at 1352.971 kb on - strand, within Dsui_1289 at 1352.991 kb on + strand, within Dsui_1289 at 1353.072 kb on + strand, within Dsui_1289 at 1353.097 kb on - strand, within Dsui_1289 at 1353.097 kb on - strand, within Dsui_1289 at 1353.183 kb on + strand at 1353.191 kb on - strand at 1353.233 kb on + strand at 1353.240 kb on - strand at 1353.240 kb on - strand at 1353.309 kb on + strand, within Dsui_1290 at 1353.317 kb on - strand, within Dsui_1290 at 1353.352 kb on - strand, within Dsui_1290 at 1353.376 kb on - strand, within Dsui_1290 at 1353.388 kb on + strand, within Dsui_1290 at 1353.401 kb on + strand, within Dsui_1290 at 1353.409 kb on - strand, within Dsui_1290 at 1353.409 kb on - strand, within Dsui_1290 at 1353.409 kb on - strand, within Dsui_1290 at 1353.492 kb on - strand, within Dsui_1290
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 1,350,565 + Dsui_1287 0.81 -1.7 1,350,573 - Dsui_1287 0.81 -1.7 1,350,602 + Dsui_1287 0.82 -1.1 1,350,648 - Dsui_1287 0.83 -1.1 1,350,702 + Dsui_1287 0.84 -1.0 1,350,732 + Dsui_1287 0.84 +0.0 1,350,737 + Dsui_1287 0.84 -0.5 1,350,737 + Dsui_1287 0.84 -1.2 1,350,745 - Dsui_1287 0.85 -1.8 1,350,813 + Dsui_1287 0.86 +0.4 1,350,820 - Dsui_1287 0.86 -1.2 1,350,981 + Dsui_1287 0.90 -1.7 1,351,020 - -0.7 1,351,072 - -3.0 1,351,121 + -1.4 1,351,131 + -1.3 1,351,131 + +0.0 1,351,131 + -2.6 1,351,199 - -1.0 1,351,203 - -2.0 1,351,303 - -1.0 1,351,342 - -1.9 1,351,468 - -0.9 1,351,571 + -0.1 1,351,579 - -2.6 1,351,579 - -1.4 1,351,650 - Dsui_1288 0.11 -2.7 1,351,706 - Dsui_1288 0.17 -2.8 1,351,706 - Dsui_1288 0.17 -0.8 1,351,737 - Dsui_1288 0.20 -1.0 1,351,808 - Dsui_1288 0.27 -2.3 1,351,863 - Dsui_1288 0.33 -1.3 1,351,869 + Dsui_1288 0.34 -0.1 1,351,884 + Dsui_1288 0.35 +0.3 1,351,884 + Dsui_1288 0.35 +0.2 1,351,906 + Dsui_1288 0.38 -0.5 1,351,907 + Dsui_1288 0.38 -3.0 1,351,982 + Dsui_1288 0.46 -1.4 1,352,062 - Dsui_1288 0.54 -2.2 1,352,118 - Dsui_1288 0.60 -1.4 1,352,153 - Dsui_1288 0.64 +0.5 1,352,160 - Dsui_1288 0.64 -2.1 1,352,170 - Dsui_1288 0.66 -1.2 1,352,292 + Dsui_1288 0.78 -0.9 1,352,292 + Dsui_1288 0.78 -0.0 1,352,324 - Dsui_1288 0.82 -1.5 1,352,339 + Dsui_1288 0.83 -1.1 1,352,354 + Dsui_1288 0.85 +0.4 1,352,354 + Dsui_1288 0.85 -1.0 1,352,355 - Dsui_1288 0.85 -0.6 1,352,362 - Dsui_1288 0.86 -1.7 1,352,368 - Dsui_1288 0.86 -2.2 1,352,428 + -0.7 1,352,460 - -2.0 1,352,465 - -2.9 1,352,490 + +1.3 1,352,498 - -2.0 1,352,498 - -0.1 1,352,503 + +0.6 1,352,623 + Dsui_1289 0.17 -0.5 1,352,638 + Dsui_1289 0.19 -0.1 1,352,661 + Dsui_1289 0.22 -0.5 1,352,661 + Dsui_1289 0.22 -1.0 1,352,661 + Dsui_1289 0.22 -1.0 1,352,661 + Dsui_1289 0.22 -0.6 1,352,661 + Dsui_1289 0.22 -1.3 1,352,661 + Dsui_1289 0.22 -1.6 1,352,661 + Dsui_1289 0.22 -0.3 1,352,664 - Dsui_1289 0.23 -2.7 1,352,669 - Dsui_1289 0.23 -1.9 1,352,669 - Dsui_1289 0.23 -1.0 1,352,669 - Dsui_1289 0.23 +0.3 1,352,669 - Dsui_1289 0.23 -3.4 1,352,811 - Dsui_1289 0.44 -1.3 1,352,826 - Dsui_1289 0.46 -1.7 1,352,831 - Dsui_1289 0.46 +0.1 1,352,838 + Dsui_1289 0.47 -1.3 1,352,885 + Dsui_1289 0.54 -0.1 1,352,914 - Dsui_1289 0.58 -2.6 1,352,925 + Dsui_1289 0.60 -0.5 1,352,933 - Dsui_1289 0.61 -2.6 1,352,971 - Dsui_1289 0.67 -0.3 1,352,991 + Dsui_1289 0.69 +2.0 1,353,072 + Dsui_1289 0.81 -1.0 1,353,097 - Dsui_1289 0.85 -2.1 1,353,097 - Dsui_1289 0.85 -1.1 1,353,183 + +0.8 1,353,191 - +0.3 1,353,233 + +0.4 1,353,240 - -2.1 1,353,240 - -1.4 1,353,309 + Dsui_1290 0.17 -0.2 1,353,317 - Dsui_1290 0.18 -2.6 1,353,352 - Dsui_1290 0.23 -2.7 1,353,376 - Dsui_1290 0.27 -1.4 1,353,388 + Dsui_1290 0.29 -0.8 1,353,401 + Dsui_1290 0.31 -0.0 1,353,409 - Dsui_1290 0.32 -0.3 1,353,409 - Dsui_1290 0.32 -2.0 1,353,409 - Dsui_1290 0.32 -1.5 1,353,492 - Dsui_1290 0.44 -1.4
Or see this region's nucleotide sequence