Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1096 and Dsui_1097 are separated by 0 nucleotides Dsui_1097 and Dsui_1098 are separated by 108 nucleotides Dsui_1098 and Dsui_1099 are separated by 57 nucleotides
Dsui_1096: Dsui_1096 - glutamate synthase family protein, at 1,135,263 to 1,139,960
_1096
Dsui_1097: Dsui_1097 - NADH/NADPH-dependent glutamate synthase small subunit, at 1,139,961 to 1,141,427
_1097
Dsui_1098: Dsui_1098 - hypothetical protein, at 1,141,536 to 1,142,249
_1098
Dsui_1099: Dsui_1099 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 1,142,307 to 1,143,665
_1099
Position (kb)
1139
1140
1141
1142 Strain fitness (log2 ratio)
-2
-1
0
1 at 1138.975 kb on + strand, within Dsui_1096 at 1139.036 kb on - strand, within Dsui_1096 at 1139.093 kb on + strand, within Dsui_1096 at 1139.101 kb on - strand at 1139.279 kb on + strand, within Dsui_1096 at 1139.426 kb on - strand, within Dsui_1096 at 1139.431 kb on - strand, within Dsui_1096 at 1139.439 kb on + strand, within Dsui_1096 at 1139.445 kb on - strand, within Dsui_1096 at 1139.488 kb on + strand, within Dsui_1096 at 1139.488 kb on + strand, within Dsui_1096 at 1139.515 kb on - strand at 1139.679 kb on - strand at 1139.745 kb on - strand at 1139.786 kb on + strand at 1139.786 kb on + strand at 1139.792 kb on - strand at 1139.794 kb on - strand at 1139.798 kb on + strand at 1139.832 kb on - strand at 1139.949 kb on - strand at 1140.018 kb on + strand at 1140.029 kb on + strand at 1140.323 kb on + strand, within Dsui_1097 at 1140.370 kb on - strand at 1140.377 kb on + strand, within Dsui_1097 at 1140.539 kb on + strand, within Dsui_1097 at 1140.656 kb on + strand, within Dsui_1097 at 1140.829 kb on - strand, within Dsui_1097 at 1140.934 kb on - strand, within Dsui_1097 at 1140.979 kb on - strand at 1141.031 kb on - strand, within Dsui_1097 at 1141.093 kb on + strand, within Dsui_1097 at 1141.110 kb on + strand, within Dsui_1097 at 1141.196 kb on - strand, within Dsui_1097 at 1141.222 kb on + strand, within Dsui_1097 at 1141.677 kb on + strand, within Dsui_1098 at 1141.765 kb on + strand, within Dsui_1098 at 1141.827 kb on + strand, within Dsui_1098 at 1141.901 kb on + strand, within Dsui_1098 at 1142.116 kb on - strand, within Dsui_1098 at 1142.171 kb on + strand, within Dsui_1098 at 1142.256 kb on + strand at 1142.256 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 1,138,975 + Dsui_1096 0.79 +1.6 1,139,036 - Dsui_1096 0.80 -1.2 1,139,093 + Dsui_1096 0.82 +1.6 1,139,101 - +1.6 1,139,279 + Dsui_1096 0.85 +1.6 1,139,426 - Dsui_1096 0.89 -1.8 1,139,431 - Dsui_1096 0.89 -0.4 1,139,439 + Dsui_1096 0.89 -1.4 1,139,445 - Dsui_1096 0.89 -0.8 1,139,488 + Dsui_1096 0.90 +0.6 1,139,488 + Dsui_1096 0.90 +1.6 1,139,515 - -1.8 1,139,679 - -0.4 1,139,745 - +0.6 1,139,786 + -0.4 1,139,786 + -0.0 1,139,792 - +0.6 1,139,794 - -0.8 1,139,798 + -0.0 1,139,832 - -0.8 1,139,949 - -1.0 1,140,018 + -2.3 1,140,029 + +1.6 1,140,323 + Dsui_1097 0.25 -1.9 1,140,370 - +1.6 1,140,377 + Dsui_1097 0.28 +0.6 1,140,539 + Dsui_1097 0.39 -0.0 1,140,656 + Dsui_1097 0.47 -0.0 1,140,829 - Dsui_1097 0.59 -0.0 1,140,934 - Dsui_1097 0.66 +0.6 1,140,979 - -0.0 1,141,031 - Dsui_1097 0.73 -0.8 1,141,093 + Dsui_1097 0.77 -0.8 1,141,110 + Dsui_1097 0.78 +1.6 1,141,196 - Dsui_1097 0.84 -0.0 1,141,222 + Dsui_1097 0.86 +1.6 1,141,677 + Dsui_1098 0.20 +0.7 1,141,765 + Dsui_1098 0.32 +0.7 1,141,827 + Dsui_1098 0.41 +1.6 1,141,901 + Dsui_1098 0.51 +0.5 1,142,116 - Dsui_1098 0.81 -2.5 1,142,171 + Dsui_1098 0.89 +1.3 1,142,256 + +1.1 1,142,256 + +0.7
Or see this region's nucleotide sequence