Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0894 and Dsui_0895 are separated by 83 nucleotides Dsui_0895 and Dsui_0896 are separated by 18 nucleotides
Dsui_0894: Dsui_0894 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 908,275 to 910,899
_0894
Dsui_0895: Dsui_0895 - nitrogen regulatory protein PII, at 910,983 to 911,321
_0895
Dsui_0896: Dsui_0896 - heavy metal efflux pump, cobalt-zinc-cadmium, at 911,340 to 914,450
_0896
Position (kb) 910
911
912 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 910.037 kb on + strand at 910.046 kb on - strand, within Dsui_0894 at 910.053 kb on + strand, within Dsui_0894 at 910.129 kb on + strand at 910.171 kb on + strand, within Dsui_0894 at 910.179 kb on - strand, within Dsui_0894 at 910.184 kb on + strand, within Dsui_0894 at 910.235 kb on - strand at 910.287 kb on + strand, within Dsui_0894 at 910.287 kb on + strand, within Dsui_0894 at 910.357 kb on + strand, within Dsui_0894 at 910.402 kb on + strand, within Dsui_0894 at 910.460 kb on + strand, within Dsui_0894 at 910.512 kb on + strand, within Dsui_0894 at 910.592 kb on - strand, within Dsui_0894 at 910.631 kb on + strand, within Dsui_0894 at 910.631 kb on + strand, within Dsui_0894 at 910.641 kb on + strand at 910.658 kb on - strand at 910.667 kb on + strand at 910.727 kb on - strand at 910.916 kb on - strand at 911.155 kb on - strand, within Dsui_0895 at 911.155 kb on - strand, within Dsui_0895 at 911.155 kb on - strand, within Dsui_0895 at 911.182 kb on - strand, within Dsui_0895 at 911.274 kb on - strand, within Dsui_0895 at 911.278 kb on - strand, within Dsui_0895 at 911.331 kb on + strand at 911.331 kb on + strand at 911.373 kb on + strand at 911.380 kb on - strand at 911.398 kb on - strand at 911.405 kb on + strand at 911.405 kb on - strand at 911.410 kb on - strand at 911.413 kb on - strand at 911.420 kb on - strand at 911.551 kb on - strand at 911.628 kb on - strand at 911.638 kb on - strand at 911.735 kb on + strand, within Dsui_0896 at 911.786 kb on + strand at 911.794 kb on - strand at 911.824 kb on + strand, within Dsui_0896 at 911.873 kb on + strand, within Dsui_0896 at 911.948 kb on + strand at 911.951 kb on - strand, within Dsui_0896 at 912.029 kb on + strand, within Dsui_0896 at 912.070 kb on - strand, within Dsui_0896 at 912.089 kb on - strand, within Dsui_0896 at 912.199 kb on + strand, within Dsui_0896 at 912.238 kb on + strand, within Dsui_0896
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 910,037 + -2.4 910,046 - Dsui_0894 0.67 -0.2 910,053 + Dsui_0894 0.68 -0.3 910,129 + +0.2 910,171 + Dsui_0894 0.72 +1.2 910,179 - Dsui_0894 0.73 +0.4 910,184 + Dsui_0894 0.73 +1.7 910,235 - -0.7 910,287 + Dsui_0894 0.77 -0.5 910,287 + Dsui_0894 0.77 -0.3 910,357 + Dsui_0894 0.79 -0.3 910,402 + Dsui_0894 0.81 -0.7 910,460 + Dsui_0894 0.83 -0.1 910,512 + Dsui_0894 0.85 -2.0 910,592 - Dsui_0894 0.88 +0.5 910,631 + Dsui_0894 0.90 +1.0 910,631 + Dsui_0894 0.90 -2.8 910,641 + -0.0 910,658 - -3.2 910,667 + +0.2 910,727 - -2.0 910,916 - +0.9 911,155 - Dsui_0895 0.51 +0.7 911,155 - Dsui_0895 0.51 +0.6 911,155 - Dsui_0895 0.51 -3.3 911,182 - Dsui_0895 0.59 -0.4 911,274 - Dsui_0895 0.86 -0.4 911,278 - Dsui_0895 0.87 +0.2 911,331 + -2.6 911,331 + +0.8 911,373 + +1.6 911,380 - +0.9 911,398 - -1.6 911,405 + -0.6 911,405 - +0.9 911,410 - +1.7 911,413 - -0.7 911,420 - -0.2 911,551 - -1.0 911,628 - +0.6 911,638 - +1.4 911,735 + Dsui_0896 0.13 -0.8 911,786 + +0.1 911,794 - +0.7 911,824 + Dsui_0896 0.16 +0.7 911,873 + Dsui_0896 0.17 +1.2 911,948 + -0.5 911,951 - Dsui_0896 0.20 -0.2 912,029 + Dsui_0896 0.22 -0.5 912,070 - Dsui_0896 0.23 +0.2 912,089 - Dsui_0896 0.24 +1.3 912,199 + Dsui_0896 0.28 -0.1 912,238 + Dsui_0896 0.29 -0.6
Or see this region's nucleotide sequence