Strain Fitness in Dechlorosoma suillum PS around Dsui_0284

Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0283 and Dsui_0284 are separated by 42 nucleotidesDsui_0284 and Dsui_0285 are separated by 295 nucleotides Dsui_0283: Dsui_0283 - chaperonin GroL, at 283,284 to 284,933 _0283 Dsui_0284: Dsui_0284 - Co-chaperonin GroES, at 284,976 to 285,266 _0284 Dsui_0285: Dsui_0285 - methionine aminopeptidase, type I, at 285,562 to 286,386 _0285 Position (kb) 284 285 286Strain fitness (log2 ratio) -2 -1 0 1 2 3at 284.974 kb on - strandat 284.981 kb on - strandat 284.981 kb on - strandat 285.000 kb on - strandat 285.306 kb on - strandat 285.343 kb on - strandat 285.442 kb on - strandat 285.442 kb on - strandat 285.537 kb on - strandat 285.560 kb on + strandat 285.563 kb on - strandat 285.568 kb on - strandat 285.568 kb on - strandat 285.574 kb on - strandat 285.585 kb on - strandat 285.610 kb on + strandat 285.658 kb on + strand, within Dsui_0285at 285.666 kb on - strand, within Dsui_0285at 285.697 kb on + strand, within Dsui_0285at 285.703 kb on + strandat 285.711 kb on - strand, within Dsui_0285at 285.773 kb on - strand, within Dsui_0285at 285.797 kb on - strand, within Dsui_0285at 285.824 kb on - strand, within Dsui_0285at 285.852 kb on - strand, within Dsui_0285at 285.852 kb on - strand, within Dsui_0285at 285.887 kb on + strandat 285.895 kb on - strand, within Dsui_0285at 285.913 kb on + strandat 285.983 kb on + strand, within Dsui_0285at 286.042 kb on + strandat 286.154 kb on - strand, within Dsui_0285at 286.172 kb on + strandat 286.178 kb on + strand, within Dsui_0285at 286.179 kb on - strand, within Dsui_0285at 286.180 kb on - strand, within Dsui_0285at 286.180 kb on - strand, within Dsui_0285at 286.180 kb on - strand, within Dsui_0285at 286.180 kb on - strand, within Dsui_0285at 286.180 kb on - strand, within Dsui_0285at 286.186 kb on - strand, within Dsui_0285at 286.190 kb on - strand, within Dsui_0285

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Per-strain Table

Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
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284,974 - -0.9
284,981 - +1.0
284,981 - +0.7
285,000 - -1.3
285,306 - -0.7
285,343 - -1.7
285,442 - -0.0
285,442 - +1.5
285,537 - -0.2
285,560 + +0.1
285,563 - -0.5
285,568 - +1.9
285,568 - +0.9
285,574 - +0.4
285,585 - +0.3
285,610 + +1.1
285,658 + Dsui_0285 0.12 +0.3
285,666 - Dsui_0285 0.13 +0.9
285,697 + Dsui_0285 0.16 +0.5
285,703 + -1.1
285,711 - Dsui_0285 0.18 +1.2
285,773 - Dsui_0285 0.26 +2.9
285,797 - Dsui_0285 0.28 +2.5
285,824 - Dsui_0285 0.32 +1.1
285,852 - Dsui_0285 0.35 +0.8
285,852 - Dsui_0285 0.35 +0.4
285,887 + +0.5
285,895 - Dsui_0285 0.40 +0.3
285,913 + +0.2
285,983 + Dsui_0285 0.51 -1.4
286,042 + -1.9
286,154 - Dsui_0285 0.72 +0.7
286,172 + -1.5
286,178 + Dsui_0285 0.75 -0.5
286,179 - Dsui_0285 0.75 +0.2
286,180 - Dsui_0285 0.75 +0.0
286,180 - Dsui_0285 0.75 +0.9
286,180 - Dsui_0285 0.75 +0.2
286,180 - Dsui_0285 0.75 -1.7
286,180 - Dsui_0285 0.75 +0.8
286,186 - Dsui_0285 0.76 +0.7
286,190 - Dsui_0285 0.76 +1.4

Or see this region's nucleotide sequence