Experiment: incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0089 and Dsui_0090 are separated by 132 nucleotides Dsui_0090 and Dsui_0091 are separated by 19 nucleotides
Dsui_0089: Dsui_0089 - methyl-accepting chemotaxis protein, at 87,164 to 88,798
_0089
Dsui_0090: Dsui_0090 - Sua5/YciO/YrdC/YwlC family protein, at 88,931 to 89,941
_0090
Dsui_0091: Dsui_0091 - phosphoribosylaminoimidazole carboxylase, PurK protein, at 89,961 to 91,115
_0091
Position (kb)
88
89
90 Strain fitness (log2 ratio)
-2
-1
0
1 at 87.976 kb on + strand, within Dsui_0089 at 87.990 kb on + strand, within Dsui_0089 at 88.064 kb on + strand, within Dsui_0089 at 88.067 kb on + strand at 88.122 kb on - strand, within Dsui_0089 at 88.145 kb on - strand, within Dsui_0089 at 88.145 kb on - strand, within Dsui_0089 at 88.145 kb on - strand, within Dsui_0089 at 88.198 kb on + strand, within Dsui_0089 at 88.218 kb on - strand, within Dsui_0089 at 88.228 kb on - strand, within Dsui_0089 at 88.284 kb on + strand, within Dsui_0089 at 88.292 kb on - strand, within Dsui_0089 at 88.297 kb on - strand, within Dsui_0089 at 88.297 kb on - strand, within Dsui_0089 at 88.354 kb on + strand, within Dsui_0089 at 88.425 kb on + strand, within Dsui_0089 at 88.433 kb on - strand, within Dsui_0089 at 88.433 kb on - strand, within Dsui_0089 at 88.454 kb on - strand, within Dsui_0089 at 88.545 kb on + strand, within Dsui_0089 at 88.557 kb on + strand at 88.631 kb on + strand, within Dsui_0089 at 88.719 kb on + strand at 88.729 kb on + strand at 88.738 kb on - strand at 88.743 kb on - strand at 88.781 kb on - strand at 88.781 kb on - strand at 88.781 kb on - strand at 88.782 kb on - strand at 88.782 kb on - strand at 88.782 kb on - strand at 88.812 kb on - strand at 88.820 kb on + strand at 88.844 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours remove 87,976 + Dsui_0089 0.50 -1.3 87,990 + Dsui_0089 0.51 -0.1 88,064 + Dsui_0089 0.55 +1.0 88,067 + +0.1 88,122 - Dsui_0089 0.59 +0.6 88,145 - Dsui_0089 0.60 +1.0 88,145 - Dsui_0089 0.60 +0.1 88,145 - Dsui_0089 0.60 +0.7 88,198 + Dsui_0089 0.63 -0.2 88,218 - Dsui_0089 0.64 +0.6 88,228 - Dsui_0089 0.65 +1.2 88,284 + Dsui_0089 0.69 -0.8 88,292 - Dsui_0089 0.69 -0.0 88,297 - Dsui_0089 0.69 +1.2 88,297 - Dsui_0089 0.69 +0.6 88,354 + Dsui_0089 0.73 +0.1 88,425 + Dsui_0089 0.77 +0.2 88,433 - Dsui_0089 0.78 +1.1 88,433 - Dsui_0089 0.78 +1.1 88,454 - Dsui_0089 0.79 +0.9 88,545 + Dsui_0089 0.84 -1.1 88,557 + -1.3 88,631 + Dsui_0089 0.90 -0.7 88,719 + -2.7 88,729 + -0.9 88,738 - +1.0 88,743 - +1.2 88,781 - +0.7 88,781 - +1.0 88,781 - -0.9 88,782 - +0.9 88,782 - +1.2 88,782 - +0.9 88,812 - +1.0 88,820 + -1.1 88,844 + +0.5
Or see this region's nucleotide sequence