Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04345

Experiment: D-Xylose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS04340 and BWI76_RS04345 overlap by 1 nucleotidesBWI76_RS04345 and BWI76_RS04350 are separated by 54 nucleotidesBWI76_RS04350 and BWI76_RS04355 are separated by 1 nucleotides BWI76_RS04340: BWI76_RS04340 - isoleucine--tRNA ligase, at 893,048 to 895,864 _RS04340 BWI76_RS04345: BWI76_RS04345 - signal peptidase II, at 895,864 to 896,364 _RS04345 BWI76_RS04350: BWI76_RS04350 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 896,419 to 896,868 _RS04350 BWI76_RS04355: BWI76_RS04355 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 896,870 to 897,820 _RS04355 Position (kb) 895 896 897Strain fitness (log2 ratio) -1 0 1 2at 896.421 kb on + strandat 896.558 kb on + strand, within BWI76_RS04350

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Xylose (C)
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896,421 + +1.9
896,558 + BWI76_RS04350 0.31 +1.1

Or see this region's nucleotide sequence