Experiment: Benzalkonium Chloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24250 and AO353_24255 are separated by 309 nucleotides AO353_24255 and AO353_24260 are separated by 34 nucleotides
AO353_24250: AO353_24250 - hypothetical protein, at 5,336,206 to 5,336,553
_24250
AO353_24255: AO353_24255 - hypothetical protein, at 5,336,863 to 5,337,609
_24255
AO353_24260: AO353_24260 - hypothetical protein, at 5,337,644 to 5,338,573
_24260
Position (kb)
5336
5337
5338 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5335.864 kb on + strand at 5335.911 kb on + strand at 5335.912 kb on - strand at 5335.912 kb on - strand at 5335.913 kb on + strand at 5335.914 kb on - strand at 5335.914 kb on - strand at 5335.996 kb on + strand at 5336.033 kb on + strand at 5336.034 kb on - strand at 5336.034 kb on - strand at 5336.052 kb on + strand at 5336.052 kb on + strand at 5336.052 kb on + strand at 5336.052 kb on + strand at 5336.052 kb on + strand at 5336.052 kb on + strand at 5336.052 kb on + strand at 5336.052 kb on + strand at 5336.053 kb on - strand at 5336.053 kb on - strand at 5336.072 kb on + strand at 5336.073 kb on - strand at 5336.096 kb on + strand at 5336.097 kb on - strand at 5336.187 kb on + strand at 5336.187 kb on + strand at 5336.188 kb on - strand at 5336.188 kb on - strand at 5336.403 kb on + strand, within AO353_24250 at 5336.403 kb on + strand, within AO353_24250 at 5336.404 kb on - strand, within AO353_24250 at 5336.404 kb on - strand, within AO353_24250 at 5336.404 kb on - strand, within AO353_24250 at 5336.407 kb on + strand, within AO353_24250 at 5336.407 kb on + strand, within AO353_24250 at 5336.407 kb on + strand at 5336.407 kb on + strand, within AO353_24250 at 5336.407 kb on + strand, within AO353_24250 at 5336.407 kb on + strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.408 kb on - strand, within AO353_24250 at 5336.439 kb on + strand, within AO353_24250 at 5336.439 kb on + strand, within AO353_24250 at 5336.439 kb on + strand, within AO353_24250 at 5336.439 kb on + strand, within AO353_24250 at 5336.439 kb on + strand, within AO353_24250 at 5336.439 kb on + strand, within AO353_24250 at 5336.439 kb on + strand, within AO353_24250 at 5336.439 kb on + strand, within AO353_24250 at 5336.440 kb on - strand, within AO353_24250 at 5336.543 kb on + strand at 5336.543 kb on + strand at 5336.544 kb on - strand at 5336.610 kb on + strand at 5336.610 kb on + strand at 5336.611 kb on - strand at 5336.611 kb on - strand at 5336.611 kb on - strand at 5336.611 kb on - strand at 5336.697 kb on - strand at 5336.697 kb on - strand at 5336.705 kb on - strand at 5336.752 kb on + strand at 5336.778 kb on + strand at 5336.902 kb on + strand at 5337.192 kb on + strand, within AO353_24255 at 5337.192 kb on + strand, within AO353_24255 at 5337.195 kb on - strand, within AO353_24255 at 5337.252 kb on + strand, within AO353_24255 at 5337.292 kb on + strand, within AO353_24255 at 5337.293 kb on - strand, within AO353_24255 at 5337.293 kb on - strand, within AO353_24255 at 5337.316 kb on + strand, within AO353_24255 at 5337.317 kb on - strand, within AO353_24255 at 5337.365 kb on - strand, within AO353_24255 at 5337.389 kb on + strand, within AO353_24255 at 5337.408 kb on + strand, within AO353_24255 at 5337.520 kb on + strand, within AO353_24255 at 5337.559 kb on + strand at 5337.560 kb on - strand at 5337.560 kb on - strand at 5337.625 kb on + strand at 5337.658 kb on - strand at 5337.728 kb on + strand at 5337.728 kb on + strand at 5337.728 kb on + strand at 5337.728 kb on + strand at 5337.728 kb on + strand at 5337.729 kb on - strand at 5337.863 kb on - strand, within AO353_24260 at 5337.958 kb on + strand, within AO353_24260 at 5338.031 kb on + strand, within AO353_24260 at 5338.604 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.01 mg/ml remove 5,335,864 + +0.3 5,335,911 + +1.8 5,335,912 - +0.5 5,335,912 - -1.3 5,335,913 + -0.5 5,335,914 - -0.9 5,335,914 - -0.5 5,335,996 + -2.3 5,336,033 + -1.2 5,336,034 - -1.1 5,336,034 - +1.1 5,336,052 + -1.5 5,336,052 + -0.9 5,336,052 + -1.8 5,336,052 + +0.5 5,336,052 + -1.7 5,336,052 + -2.5 5,336,052 + +2.1 5,336,052 + +0.7 5,336,053 - -0.5 5,336,053 - -1.8 5,336,072 + +0.5 5,336,073 - -0.7 5,336,096 + -0.2 5,336,097 - +0.7 5,336,187 + -0.2 5,336,187 + -0.5 5,336,188 - +0.4 5,336,188 - -1.1 5,336,403 + AO353_24250 0.57 -2.6 5,336,403 + AO353_24250 0.57 +0.2 5,336,404 - AO353_24250 0.57 +0.2 5,336,404 - AO353_24250 0.57 +0.8 5,336,404 - AO353_24250 0.57 -0.5 5,336,407 + AO353_24250 0.58 +0.8 5,336,407 + AO353_24250 0.58 +0.2 5,336,407 + -0.5 5,336,407 + AO353_24250 0.58 -1.1 5,336,407 + AO353_24250 0.58 -1.8 5,336,407 + AO353_24250 0.58 -2.6 5,336,408 - AO353_24250 0.58 -1.1 5,336,408 - AO353_24250 0.58 -0.5 5,336,408 - AO353_24250 0.58 +0.8 5,336,408 - AO353_24250 0.58 -0.1 5,336,408 - AO353_24250 0.58 -0.6 5,336,408 - AO353_24250 0.58 -1.6 5,336,408 - AO353_24250 0.58 -0.1 5,336,408 - AO353_24250 0.58 +0.2 5,336,408 - AO353_24250 0.58 +0.2 5,336,408 - AO353_24250 0.58 -1.1 5,336,439 + AO353_24250 0.67 +0.5 5,336,439 + AO353_24250 0.67 -0.6 5,336,439 + AO353_24250 0.67 +1.0 5,336,439 + AO353_24250 0.67 -0.4 5,336,439 + AO353_24250 0.67 -0.5 5,336,439 + AO353_24250 0.67 +0.5 5,336,439 + AO353_24250 0.67 +0.8 5,336,439 + AO353_24250 0.67 -1.1 5,336,440 - AO353_24250 0.67 -0.5 5,336,543 + +0.5 5,336,543 + +0.2 5,336,544 - -0.5 5,336,610 + -0.1 5,336,610 + +1.8 5,336,611 - -0.8 5,336,611 - -2.1 5,336,611 - -0.5 5,336,611 - -1.1 5,336,697 - -0.4 5,336,697 - -1.8 5,336,705 - -0.1 5,336,752 + -0.5 5,336,778 + -1.1 5,336,902 + -1.3 5,337,192 + AO353_24255 0.44 -1.1 5,337,192 + AO353_24255 0.44 -2.1 5,337,195 - AO353_24255 0.44 +1.5 5,337,252 + AO353_24255 0.52 -1.1 5,337,292 + AO353_24255 0.57 +0.5 5,337,293 - AO353_24255 0.58 -1.1 5,337,293 - AO353_24255 0.58 -1.3 5,337,316 + AO353_24255 0.61 +0.5 5,337,317 - AO353_24255 0.61 -1.5 5,337,365 - AO353_24255 0.67 -1.6 5,337,389 + AO353_24255 0.70 +0.5 5,337,408 + AO353_24255 0.73 -0.8 5,337,520 + AO353_24255 0.88 +0.5 5,337,559 + +0.5 5,337,560 - -1.7 5,337,560 - -0.6 5,337,625 + -0.9 5,337,658 - -0.7 5,337,728 + -0.9 5,337,728 + +0.5 5,337,728 + -0.1 5,337,728 + -0.5 5,337,728 + +1.7 5,337,729 - +0.1 5,337,863 - AO353_24260 0.24 -1.1 5,337,958 + AO353_24260 0.34 -1.7 5,338,031 + AO353_24260 0.42 -0.3 5,338,604 + -1.2
Or see this region's nucleotide sequence