Experiment: Benzalkonium Chloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19355 and AO353_19360 overlap by 25 nucleotides AO353_19360 and AO353_19365 overlap by 1 nucleotides AO353_19365 and AO353_19370 are separated by 153 nucleotides AO353_19370 and AO353_19375 overlap by 1 nucleotides
AO353_19355: AO353_19355 - dihydroneopterin aldolase, at 4,241,923 to 4,242,690
_19355
AO353_19360: AO353_19360 - peroxiredoxin, at 4,242,666 to 4,243,532
_19360
AO353_19365: AO353_19365 - thiol:disulfide interchange protein, at 4,243,532 to 4,245,268
_19365
AO353_19370: AO353_19370 - transcriptional regulator, at 4,245,422 to 4,246,102
_19370
AO353_19375: AO353_19375 - histidine kinase, at 4,246,102 to 4,247,424
_19375
Position (kb) 4243
4244
4245
4246 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4242.817 kb on + strand, within AO353_19360 at 4242.827 kb on + strand, within AO353_19360 at 4243.334 kb on - strand, within AO353_19360 at 4243.345 kb on + strand, within AO353_19360 at 4243.346 kb on - strand, within AO353_19360 at 4243.346 kb on - strand, within AO353_19360 at 4243.748 kb on + strand, within AO353_19365 at 4243.749 kb on - strand, within AO353_19365 at 4243.810 kb on - strand, within AO353_19365 at 4243.810 kb on - strand, within AO353_19365 at 4243.810 kb on - strand, within AO353_19365 at 4243.810 kb on - strand, within AO353_19365 at 4243.810 kb on - strand, within AO353_19365 at 4243.810 kb on - strand, within AO353_19365 at 4243.813 kb on - strand, within AO353_19365 at 4243.813 kb on - strand, within AO353_19365 at 4243.813 kb on - strand, within AO353_19365 at 4243.813 kb on - strand, within AO353_19365 at 4243.813 kb on - strand, within AO353_19365 at 4243.813 kb on - strand, within AO353_19365 at 4243.813 kb on - strand, within AO353_19365 at 4243.813 kb on - strand, within AO353_19365 at 4243.945 kb on - strand, within AO353_19365 at 4243.945 kb on - strand, within AO353_19365 at 4243.945 kb on - strand, within AO353_19365 at 4244.089 kb on - strand, within AO353_19365 at 4244.118 kb on - strand, within AO353_19365 at 4244.118 kb on - strand, within AO353_19365 at 4244.341 kb on - strand, within AO353_19365 at 4244.607 kb on - strand, within AO353_19365 at 4244.607 kb on - strand, within AO353_19365 at 4244.607 kb on - strand, within AO353_19365 at 4244.607 kb on - strand, within AO353_19365 at 4244.622 kb on + strand, within AO353_19365 at 4244.623 kb on - strand, within AO353_19365 at 4244.623 kb on - strand, within AO353_19365 at 4244.647 kb on - strand, within AO353_19365 at 4244.647 kb on - strand, within AO353_19365 at 4244.647 kb on - strand, within AO353_19365 at 4244.647 kb on - strand, within AO353_19365 at 4244.647 kb on - strand, within AO353_19365 at 4244.647 kb on - strand, within AO353_19365 at 4244.647 kb on - strand, within AO353_19365 at 4244.986 kb on - strand, within AO353_19365 at 4245.088 kb on - strand, within AO353_19365 at 4245.093 kb on + strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.094 kb on - strand, within AO353_19365 at 4245.252 kb on - strand at 4245.252 kb on - strand at 4245.293 kb on + strand at 4245.293 kb on + strand at 4245.293 kb on + strand at 4245.294 kb on - strand at 4245.294 kb on - strand at 4245.294 kb on - strand at 4245.294 kb on - strand at 4245.294 kb on - strand at 4245.367 kb on + strand at 4245.367 kb on + strand at 4245.368 kb on - strand at 4245.394 kb on + strand at 4245.394 kb on + strand at 4245.394 kb on + strand at 4245.395 kb on - strand at 4245.395 kb on - strand at 4245.395 kb on - strand at 4245.410 kb on - strand at 4245.410 kb on - strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.713 kb on + strand, within AO353_19370 at 4245.714 kb on - strand, within AO353_19370 at 4245.714 kb on - strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.018 kb on + strand, within AO353_19370 at 4246.018 kb on + strand, within AO353_19370 at 4246.019 kb on - strand, within AO353_19370 at 4246.243 kb on - strand, within AO353_19375 at 4246.243 kb on - strand, within AO353_19375
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.01 mg/ml remove 4,242,817 + AO353_19360 0.17 -1.2 4,242,827 + AO353_19360 0.19 +0.8 4,243,334 - AO353_19360 0.77 +0.4 4,243,345 + AO353_19360 0.78 -0.8 4,243,346 - AO353_19360 0.78 +0.4 4,243,346 - AO353_19360 0.78 -0.0 4,243,748 + AO353_19365 0.12 -2.4 4,243,749 - AO353_19365 0.12 +0.8 4,243,810 - AO353_19365 0.16 +0.4 4,243,810 - AO353_19365 0.16 -1.6 4,243,810 - AO353_19365 0.16 +0.4 4,243,810 - AO353_19365 0.16 +1.8 4,243,810 - AO353_19365 0.16 -0.7 4,243,810 - AO353_19365 0.16 -0.3 4,243,813 - AO353_19365 0.16 -1.1 4,243,813 - AO353_19365 0.16 -0.5 4,243,813 - AO353_19365 0.16 +0.8 4,243,813 - AO353_19365 0.16 -1.4 4,243,813 - AO353_19365 0.16 +0.3 4,243,813 - AO353_19365 0.16 -1.2 4,243,813 - AO353_19365 0.16 +1.1 4,243,813 - AO353_19365 0.16 -1.5 4,243,945 - AO353_19365 0.24 -1.5 4,243,945 - AO353_19365 0.24 -0.5 4,243,945 - AO353_19365 0.24 +0.4 4,244,089 - AO353_19365 0.32 -0.2 4,244,118 - AO353_19365 0.34 -2.2 4,244,118 - AO353_19365 0.34 +1.4 4,244,341 - AO353_19365 0.47 +0.2 4,244,607 - AO353_19365 0.62 -1.4 4,244,607 - AO353_19365 0.62 +0.1 4,244,607 - AO353_19365 0.62 -0.8 4,244,607 - AO353_19365 0.62 -0.9 4,244,622 + AO353_19365 0.63 -0.8 4,244,623 - AO353_19365 0.63 -0.9 4,244,623 - AO353_19365 0.63 +0.5 4,244,647 - AO353_19365 0.64 +0.0 4,244,647 - AO353_19365 0.64 -0.8 4,244,647 - AO353_19365 0.64 -1.2 4,244,647 - AO353_19365 0.64 +0.8 4,244,647 - AO353_19365 0.64 -0.2 4,244,647 - AO353_19365 0.64 +0.0 4,244,647 - AO353_19365 0.64 +0.7 4,244,986 - AO353_19365 0.84 -1.8 4,245,088 - AO353_19365 0.90 +0.8 4,245,093 + AO353_19365 0.90 -2.4 4,245,094 - AO353_19365 0.90 +0.2 4,245,094 - AO353_19365 0.90 -0.1 4,245,094 - AO353_19365 0.90 -1.5 4,245,094 - AO353_19365 0.90 +1.8 4,245,094 - AO353_19365 0.90 +0.5 4,245,094 - AO353_19365 0.90 -0.5 4,245,094 - AO353_19365 0.90 +0.4 4,245,094 - AO353_19365 0.90 -0.7 4,245,094 - AO353_19365 0.90 -0.6 4,245,094 - AO353_19365 0.90 -1.5 4,245,252 - -2.2 4,245,252 - -0.2 4,245,293 + -1.5 4,245,293 + -0.5 4,245,293 + +0.1 4,245,294 - +2.6 4,245,294 - +0.4 4,245,294 - +0.2 4,245,294 - -0.5 4,245,294 - +0.2 4,245,367 + -0.2 4,245,367 + -0.2 4,245,368 - +0.6 4,245,394 + -0.2 4,245,394 + +1.4 4,245,394 + -0.0 4,245,395 - -0.2 4,245,395 - -1.3 4,245,395 - -0.4 4,245,410 - -0.3 4,245,410 - -1.8 4,245,429 + -0.5 4,245,429 + +0.4 4,245,429 + +0.2 4,245,429 + +1.2 4,245,429 + -0.5 4,245,429 + +2.0 4,245,429 + -1.0 4,245,429 + +1.0 4,245,429 + +0.4 4,245,429 + -2.8 4,245,429 + -0.2 4,245,429 + -2.2 4,245,429 + +1.6 4,245,429 + -0.0 4,245,429 + +1.1 4,245,429 + +0.4 4,245,430 - -1.2 4,245,430 - +0.4 4,245,430 - -0.6 4,245,430 - -2.0 4,245,430 - -2.0 4,245,430 - +1.8 4,245,430 - -0.3 4,245,430 - +0.8 4,245,430 - -0.7 4,245,430 - +0.8 4,245,430 - -0.5 4,245,430 - +1.3 4,245,430 - -2.2 4,245,430 - +0.1 4,245,430 - +0.6 4,245,430 - -0.0 4,245,713 + AO353_19370 0.43 -0.2 4,245,714 - AO353_19370 0.43 +0.2 4,245,714 - AO353_19370 0.43 -1.0 4,245,821 + AO353_19370 0.59 -0.3 4,245,821 + AO353_19370 0.59 +0.5 4,245,821 + AO353_19370 0.59 -2.0 4,245,821 + AO353_19370 0.59 -1.2 4,245,821 + AO353_19370 0.59 +2.8 4,245,821 + AO353_19370 0.59 -1.4 4,245,822 - AO353_19370 0.59 +1.8 4,245,822 - AO353_19370 0.59 +0.1 4,245,822 - AO353_19370 0.59 -0.2 4,245,822 - AO353_19370 0.59 -0.4 4,245,822 - AO353_19370 0.59 -0.6 4,245,996 + AO353_19370 0.84 -0.2 4,245,996 + AO353_19370 0.84 -0.1 4,245,996 + AO353_19370 0.84 +0.2 4,245,996 + AO353_19370 0.84 -1.2 4,245,996 + AO353_19370 0.84 -0.0 4,245,996 + AO353_19370 0.84 -0.5 4,245,996 + AO353_19370 0.84 +0.1 4,245,996 + AO353_19370 0.84 -0.2 4,245,996 + AO353_19370 0.84 -0.5 4,245,996 + AO353_19370 0.84 -1.2 4,245,996 + AO353_19370 0.84 +0.0 4,245,996 + AO353_19370 0.84 +1.8 4,245,996 + AO353_19370 0.84 +0.6 4,245,996 + AO353_19370 0.84 +0.1 4,245,996 + AO353_19370 0.84 -1.2 4,245,996 + AO353_19370 0.84 +1.8 4,245,996 + AO353_19370 0.84 +1.8 4,245,996 + AO353_19370 0.84 +0.4 4,245,996 + AO353_19370 0.84 -0.8 4,245,996 + AO353_19370 0.84 -1.2 4,245,996 + AO353_19370 0.84 -1.2 4,245,996 + AO353_19370 0.84 -1.5 4,245,996 + AO353_19370 0.84 -0.2 4,245,997 - AO353_19370 0.84 +0.8 4,245,997 - AO353_19370 0.84 +1.1 4,245,997 - AO353_19370 0.84 +0.5 4,245,997 - AO353_19370 0.84 +2.3 4,245,997 - AO353_19370 0.84 -2.5 4,245,997 - AO353_19370 0.84 -0.1 4,245,997 - AO353_19370 0.84 +0.3 4,245,997 - AO353_19370 0.84 +2.4 4,245,997 - AO353_19370 0.84 -0.2 4,245,997 - AO353_19370 0.84 -0.3 4,245,997 - AO353_19370 0.84 -1.2 4,245,997 - AO353_19370 0.84 -0.0 4,245,997 - AO353_19370 0.84 +0.1 4,245,997 - AO353_19370 0.84 -0.3 4,245,997 - AO353_19370 0.84 +0.2 4,245,997 - AO353_19370 0.84 -0.2 4,245,997 - AO353_19370 0.84 +1.8 4,245,997 - AO353_19370 0.84 +1.2 4,245,997 - AO353_19370 0.84 -1.0 4,245,997 - AO353_19370 0.84 +0.4 4,245,997 - AO353_19370 0.84 -0.8 4,245,997 - AO353_19370 0.84 +0.5 4,245,997 - AO353_19370 0.84 +0.0 4,245,997 - AO353_19370 0.84 +0.5 4,246,000 + AO353_19370 0.85 +0.8 4,246,000 + AO353_19370 0.85 -0.2 4,246,000 + AO353_19370 0.85 -0.5 4,246,000 + AO353_19370 0.85 +0.7 4,246,000 + AO353_19370 0.85 -0.2 4,246,000 + AO353_19370 0.85 -0.1 4,246,000 + AO353_19370 0.85 +2.0 4,246,000 + AO353_19370 0.85 -0.8 4,246,000 + AO353_19370 0.85 -1.8 4,246,000 + AO353_19370 0.85 -0.8 4,246,000 + AO353_19370 0.85 -0.2 4,246,000 + AO353_19370 0.85 -2.6 4,246,001 - AO353_19370 0.85 -0.6 4,246,001 - AO353_19370 0.85 -0.2 4,246,001 - AO353_19370 0.85 +0.2 4,246,001 - AO353_19370 0.85 -0.2 4,246,001 - AO353_19370 0.85 +0.1 4,246,001 - AO353_19370 0.85 +2.5 4,246,001 - AO353_19370 0.85 -1.4 4,246,001 - AO353_19370 0.85 -1.1 4,246,018 + AO353_19370 0.88 +0.4 4,246,018 + AO353_19370 0.88 +0.8 4,246,019 - AO353_19370 0.88 -2.0 4,246,243 - AO353_19375 0.11 -0.5 4,246,243 - AO353_19375 0.11 +1.0
Or see this region's nucleotide sequence