Experiment: Benzalkonium Chloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18185 and AO353_18190 are separated by 219 nucleotides AO353_18190 and AO353_18195 are separated by 38 nucleotides
AO353_18185: AO353_18185 - hypothetical protein, at 4,003,878 to 4,004,264
_18185
AO353_18190: AO353_18190 - LuxR family transcriptional regulator, at 4,004,484 to 4,005,131
_18190
AO353_18195: AO353_18195 - chemotaxis protein CheY, at 4,005,170 to 4,008,388
_18195
Position (kb)
4003
4004
4005 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4002.908 kb on + strand at 4002.908 kb on + strand at 4002.908 kb on + strand at 4002.908 kb on + strand at 4002.908 kb on + strand at 4002.908 kb on + strand at 4002.908 kb on + strand at 4002.908 kb on + strand at 4002.908 kb on + strand at 4002.909 kb on - strand at 4002.909 kb on - strand at 4002.909 kb on - strand at 4002.909 kb on - strand at 4002.909 kb on - strand at 4002.929 kb on + strand at 4002.929 kb on + strand at 4002.929 kb on + strand at 4002.930 kb on - strand at 4002.930 kb on - strand at 4002.985 kb on + strand at 4003.049 kb on + strand at 4003.049 kb on + strand at 4003.049 kb on + strand at 4003.050 kb on - strand at 4003.053 kb on + strand at 4003.053 kb on + strand at 4003.053 kb on + strand at 4003.053 kb on + strand at 4003.094 kb on + strand at 4003.094 kb on + strand at 4003.094 kb on + strand at 4003.095 kb on - strand at 4003.095 kb on - strand at 4003.095 kb on - strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.103 kb on + strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.104 kb on - strand at 4003.167 kb on - strand at 4003.258 kb on + strand at 4003.258 kb on + strand at 4003.258 kb on + strand at 4003.258 kb on + strand at 4003.258 kb on + strand at 4003.258 kb on + strand at 4003.258 kb on + strand at 4003.258 kb on + strand at 4003.259 kb on - strand at 4003.259 kb on - strand at 4003.259 kb on - strand at 4003.259 kb on - strand at 4003.259 kb on - strand at 4003.260 kb on + strand at 4003.261 kb on - strand at 4003.261 kb on - strand at 4003.261 kb on - strand at 4003.310 kb on + strand at 4003.310 kb on + strand at 4003.310 kb on + strand at 4003.310 kb on + strand at 4003.310 kb on + strand at 4003.311 kb on - strand at 4003.354 kb on - strand at 4003.371 kb on + strand at 4003.439 kb on + strand at 4003.439 kb on + strand at 4003.439 kb on + strand at 4003.452 kb on + strand at 4003.472 kb on + strand at 4003.472 kb on + strand at 4003.472 kb on + strand at 4003.473 kb on - strand at 4003.473 kb on - strand at 4003.473 kb on - strand at 4003.479 kb on + strand at 4003.523 kb on + strand at 4003.523 kb on + strand at 4003.524 kb on - strand at 4003.524 kb on - strand at 4003.524 kb on - strand at 4003.524 kb on - strand at 4003.631 kb on + strand at 4003.631 kb on + strand at 4003.631 kb on + strand at 4003.631 kb on + strand at 4003.632 kb on - strand at 4003.632 kb on - strand at 4003.632 kb on - strand at 4003.632 kb on - strand at 4003.632 kb on - strand at 4003.632 kb on - strand at 4003.698 kb on + strand at 4003.698 kb on + strand at 4003.698 kb on + strand at 4003.698 kb on + strand at 4003.698 kb on + strand at 4003.699 kb on - strand at 4003.699 kb on - strand at 4003.699 kb on - strand at 4003.699 kb on - strand at 4003.700 kb on + strand at 4003.700 kb on + strand at 4003.700 kb on + strand at 4003.721 kb on + strand at 4003.750 kb on + strand at 4003.800 kb on + strand at 4003.801 kb on - strand at 4003.801 kb on - strand at 4003.825 kb on + strand at 4003.825 kb on + strand at 4003.825 kb on + strand at 4003.825 kb on + strand at 4003.826 kb on - strand at 4003.826 kb on - strand at 4003.843 kb on + strand at 4003.843 kb on + strand at 4003.843 kb on + strand at 4003.847 kb on + strand at 4003.847 kb on + strand at 4003.847 kb on + strand at 4003.847 kb on + strand at 4003.847 kb on + strand at 4003.847 kb on + strand at 4003.847 kb on + strand at 4003.847 kb on + strand at 4003.847 kb on + strand at 4003.850 kb on + strand at 4003.850 kb on + strand at 4003.850 kb on + strand at 4003.850 kb on + strand at 4003.850 kb on + strand at 4003.850 kb on + strand at 4003.850 kb on + strand at 4003.871 kb on + strand at 4003.871 kb on + strand at 4003.871 kb on + strand at 4003.871 kb on + strand at 4003.871 kb on + strand at 4003.871 kb on + strand at 4003.871 kb on + strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.872 kb on - strand at 4003.876 kb on + strand at 4003.876 kb on + strand at 4003.876 kb on + strand at 4003.876 kb on + strand at 4003.877 kb on - strand at 4003.877 kb on - strand at 4003.877 kb on - strand at 4003.877 kb on - strand at 4003.877 kb on - strand at 4003.877 kb on - strand at 4003.899 kb on + strand at 4003.899 kb on + strand at 4003.900 kb on - strand at 4003.900 kb on - strand at 4003.900 kb on - strand at 4003.901 kb on + strand at 4003.901 kb on + strand at 4003.901 kb on + strand at 4003.901 kb on + strand at 4003.901 kb on + strand at 4003.901 kb on + strand at 4003.901 kb on + strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.902 kb on - strand at 4003.982 kb on + strand, within AO353_18185 at 4003.990 kb on + strand, within AO353_18185 at 4004.020 kb on + strand, within AO353_18185 at 4004.020 kb on + strand, within AO353_18185 at 4004.036 kb on + strand, within AO353_18185 at 4004.036 kb on + strand, within AO353_18185 at 4004.051 kb on + strand, within AO353_18185 at 4004.051 kb on + strand, within AO353_18185 at 4004.051 kb on + strand, within AO353_18185 at 4004.051 kb on + strand, within AO353_18185 at 4004.126 kb on + strand, within AO353_18185 at 4004.126 kb on + strand, within AO353_18185 at 4004.127 kb on - strand, within AO353_18185 at 4004.127 kb on - strand, within AO353_18185 at 4004.127 kb on - strand, within AO353_18185 at 4004.127 kb on - strand, within AO353_18185 at 4004.262 kb on + strand at 4004.263 kb on - strand at 4004.263 kb on - strand at 4004.263 kb on - strand at 4004.263 kb on - strand at 4004.270 kb on + strand at 4004.270 kb on + strand at 4004.270 kb on + strand at 4004.271 kb on - strand at 4004.271 kb on - strand at 4004.271 kb on - strand at 4004.285 kb on - strand at 4004.285 kb on - strand at 4004.288 kb on + strand at 4004.288 kb on + strand at 4004.288 kb on + strand at 4004.288 kb on + strand at 4004.288 kb on + strand at 4004.289 kb on - strand at 4004.315 kb on + strand at 4004.316 kb on - strand at 4004.316 kb on - strand at 4004.316 kb on - strand at 4004.399 kb on + strand at 4004.399 kb on + strand at 4004.400 kb on - strand at 4004.400 kb on - strand at 4004.498 kb on + strand at 4004.499 kb on - strand at 4004.512 kb on + strand at 4004.512 kb on + strand at 4004.512 kb on + strand at 4004.512 kb on + strand at 4004.512 kb on + strand at 4004.512 kb on + strand at 4004.512 kb on + strand at 4004.512 kb on + strand at 4004.512 kb on + strand at 4004.513 kb on - strand at 4004.513 kb on - strand at 4004.513 kb on - strand at 4004.513 kb on - strand at 4004.513 kb on - strand at 4004.513 kb on - strand at 4004.513 kb on - strand at 4004.513 kb on - strand at 4004.573 kb on + strand, within AO353_18190 at 4004.573 kb on + strand, within AO353_18190 at 4004.574 kb on - strand, within AO353_18190 at 4004.586 kb on + strand, within AO353_18190 at 4004.586 kb on + strand, within AO353_18190 at 4004.586 kb on + strand, within AO353_18190 at 4004.587 kb on - strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.793 kb on + strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.794 kb on - strand, within AO353_18190 at 4004.911 kb on + strand, within AO353_18190 at 4004.911 kb on + strand, within AO353_18190 at 4004.911 kb on + strand, within AO353_18190 at 4004.911 kb on + strand, within AO353_18190 at 4004.912 kb on - strand, within AO353_18190 at 4005.064 kb on - strand, within AO353_18190 at 4005.064 kb on - strand, within AO353_18190 at 4005.064 kb on - strand, within AO353_18190 at 4005.075 kb on + strand at 4005.075 kb on + strand at 4005.075 kb on + strand at 4005.075 kb on + strand at 4005.075 kb on + strand at 4005.075 kb on + strand at 4005.075 kb on + strand at 4005.076 kb on - strand at 4005.076 kb on - strand at 4005.076 kb on - strand at 4005.076 kb on - strand at 4005.076 kb on - strand at 4005.085 kb on - strand at 4005.087 kb on + strand at 4005.087 kb on + strand at 4005.087 kb on + strand at 4005.087 kb on + strand at 4005.087 kb on + strand at 4005.087 kb on + strand at 4005.088 kb on - strand at 4005.088 kb on - strand at 4005.088 kb on - strand at 4005.088 kb on - strand at 4005.164 kb on + strand at 4005.164 kb on + strand at 4005.165 kb on - strand at 4005.165 kb on - strand at 4005.165 kb on - strand at 4005.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.01 mg/ml remove 4,002,908 + +0.9 4,002,908 + -1.1 4,002,908 + -0.4 4,002,908 + -0.7 4,002,908 + -0.7 4,002,908 + -1.8 4,002,908 + -0.2 4,002,908 + +0.6 4,002,908 + +0.6 4,002,909 - -0.7 4,002,909 - -1.0 4,002,909 - +0.5 4,002,909 - -0.1 4,002,909 - +0.1 4,002,929 + +0.2 4,002,929 + +0.1 4,002,929 + +0.9 4,002,930 - -0.7 4,002,930 - -0.7 4,002,985 + +0.8 4,003,049 + +0.5 4,003,049 + +0.3 4,003,049 + +2.2 4,003,050 - -1.8 4,003,053 + -1.2 4,003,053 + +0.9 4,003,053 + -1.9 4,003,053 + -1.4 4,003,094 + +1.5 4,003,094 + +0.6 4,003,094 + -0.1 4,003,095 - -1.5 4,003,095 - -0.8 4,003,095 - +0.9 4,003,103 + +0.7 4,003,103 + -1.1 4,003,103 + -0.9 4,003,103 + -2.1 4,003,103 + -0.1 4,003,103 + +1.5 4,003,103 + -0.1 4,003,103 + +0.3 4,003,103 + -0.9 4,003,103 + -0.3 4,003,103 + -0.3 4,003,103 + -0.1 4,003,104 - -1.2 4,003,104 - -0.1 4,003,104 - +0.2 4,003,104 - -0.8 4,003,104 - -0.1 4,003,104 - -0.4 4,003,104 - -0.1 4,003,104 - +0.2 4,003,104 - +1.5 4,003,104 - +0.1 4,003,104 - -0.1 4,003,104 - -0.1 4,003,104 - +0.2 4,003,104 - +0.9 4,003,104 - +0.9 4,003,167 - -0.2 4,003,258 + -2.1 4,003,258 + -0.3 4,003,258 + +0.2 4,003,258 + -0.5 4,003,258 + -0.9 4,003,258 + -0.7 4,003,258 + +0.1 4,003,258 + -2.1 4,003,259 - -1.1 4,003,259 - +0.3 4,003,259 - +1.9 4,003,259 - -0.2 4,003,259 - +0.5 4,003,260 + -1.2 4,003,261 - -0.4 4,003,261 - -0.7 4,003,261 - +1.1 4,003,310 + -0.3 4,003,310 + +0.6 4,003,310 + -0.1 4,003,310 + +0.9 4,003,310 + +1.7 4,003,311 - +1.1 4,003,354 - +0.2 4,003,371 + +0.3 4,003,439 + +1.5 4,003,439 + +0.3 4,003,439 + -1.1 4,003,452 + +0.3 4,003,472 + -0.0 4,003,472 + +2.9 4,003,472 + -0.3 4,003,473 - -1.5 4,003,473 - +2.5 4,003,473 - -0.3 4,003,479 + +0.2 4,003,523 + -0.7 4,003,523 + -0.2 4,003,524 - -0.7 4,003,524 - +0.9 4,003,524 - -1.1 4,003,524 - -1.1 4,003,631 + -0.3 4,003,631 + +0.7 4,003,631 + -0.4 4,003,631 + +0.9 4,003,632 - +1.6 4,003,632 - +0.2 4,003,632 - -0.7 4,003,632 - -1.1 4,003,632 - -2.0 4,003,632 - -1.9 4,003,698 + -1.9 4,003,698 + -0.9 4,003,698 + +0.7 4,003,698 + +1.2 4,003,698 + +0.3 4,003,699 - -1.1 4,003,699 - -1.7 4,003,699 - +0.9 4,003,699 - -0.1 4,003,700 + +1.5 4,003,700 + -0.7 4,003,700 + +1.1 4,003,721 + +0.9 4,003,750 + +1.7 4,003,800 + -1.4 4,003,801 - +0.9 4,003,801 - -0.5 4,003,825 + +0.1 4,003,825 + -0.1 4,003,825 + -3.2 4,003,825 + -1.7 4,003,826 - +0.3 4,003,826 - -1.5 4,003,843 + -0.2 4,003,843 + -2.8 4,003,843 + -1.1 4,003,847 + +0.5 4,003,847 + +0.8 4,003,847 + +0.4 4,003,847 + +0.6 4,003,847 + -0.1 4,003,847 + -0.7 4,003,847 + -0.3 4,003,847 + -2.1 4,003,847 + -1.1 4,003,850 + -0.4 4,003,850 + +0.8 4,003,850 + -1.1 4,003,850 + -1.7 4,003,850 + -1.1 4,003,850 + +0.2 4,003,850 + +1.2 4,003,871 + +0.4 4,003,871 + +0.5 4,003,871 + +0.7 4,003,871 + -1.1 4,003,871 + +0.6 4,003,871 + -1.4 4,003,871 + +1.2 4,003,872 - +0.1 4,003,872 - +0.2 4,003,872 - -2.1 4,003,872 - +0.6 4,003,872 - +1.6 4,003,872 - -0.5 4,003,872 - -0.1 4,003,872 - +0.9 4,003,872 - -1.6 4,003,872 - -1.4 4,003,872 - +2.3 4,003,876 + +0.6 4,003,876 + +0.6 4,003,876 + -0.1 4,003,876 + +1.7 4,003,877 - -1.7 4,003,877 - -1.1 4,003,877 - +1.2 4,003,877 - +1.9 4,003,877 - -0.6 4,003,877 - +0.3 4,003,899 + -0.2 4,003,899 + +0.3 4,003,900 - +2.5 4,003,900 - +0.9 4,003,900 - -0.8 4,003,901 + -1.9 4,003,901 + -1.4 4,003,901 + -0.9 4,003,901 + -0.7 4,003,901 + +1.3 4,003,901 + -1.7 4,003,901 + -0.7 4,003,902 - -0.2 4,003,902 - -0.1 4,003,902 - -0.1 4,003,902 - -1.9 4,003,902 - -0.1 4,003,902 - -1.4 4,003,902 - -1.4 4,003,902 - +0.2 4,003,902 - +1.7 4,003,902 - -0.3 4,003,902 - +2.5 4,003,982 + AO353_18185 0.27 -1.9 4,003,990 + AO353_18185 0.29 -0.3 4,004,020 + AO353_18185 0.37 +0.6 4,004,020 + AO353_18185 0.37 +0.5 4,004,036 + AO353_18185 0.41 -2.1 4,004,036 + AO353_18185 0.41 -0.9 4,004,051 + AO353_18185 0.45 -0.1 4,004,051 + AO353_18185 0.45 +1.3 4,004,051 + AO353_18185 0.45 -2.4 4,004,051 + AO353_18185 0.45 -1.5 4,004,126 + AO353_18185 0.64 -0.7 4,004,126 + AO353_18185 0.64 -0.5 4,004,127 - AO353_18185 0.64 -1.5 4,004,127 - AO353_18185 0.64 +0.3 4,004,127 - AO353_18185 0.64 -0.9 4,004,127 - AO353_18185 0.64 -0.7 4,004,262 + -0.5 4,004,263 - -1.4 4,004,263 - +0.4 4,004,263 - +1.3 4,004,263 - -0.5 4,004,270 + -1.9 4,004,270 + -0.6 4,004,270 + -2.8 4,004,271 - +1.7 4,004,271 - -0.4 4,004,271 - -0.1 4,004,285 - -1.5 4,004,285 - -0.9 4,004,288 + +0.3 4,004,288 + +0.2 4,004,288 + -1.1 4,004,288 + +1.4 4,004,288 + -0.9 4,004,289 - +1.7 4,004,315 + +0.9 4,004,316 - -2.1 4,004,316 - +0.9 4,004,316 - -0.1 4,004,399 + -3.2 4,004,399 + +1.5 4,004,400 - +0.9 4,004,400 - -0.7 4,004,498 + +0.9 4,004,499 - +1.1 4,004,512 + +0.5 4,004,512 + -1.7 4,004,512 + -0.1 4,004,512 + -0.2 4,004,512 + +0.1 4,004,512 + +0.7 4,004,512 + +1.3 4,004,512 + -1.4 4,004,512 + -0.2 4,004,513 - -1.2 4,004,513 - -1.4 4,004,513 - +0.5 4,004,513 - -1.1 4,004,513 - +0.2 4,004,513 - -1.7 4,004,513 - -1.1 4,004,513 - -0.1 4,004,573 + AO353_18190 0.14 +0.2 4,004,573 + AO353_18190 0.14 +0.9 4,004,574 - AO353_18190 0.14 +0.8 4,004,586 + AO353_18190 0.16 +0.9 4,004,586 + AO353_18190 0.16 +0.4 4,004,586 + AO353_18190 0.16 +1.7 4,004,587 - AO353_18190 0.16 +0.3 4,004,793 + AO353_18190 0.48 +1.3 4,004,793 + AO353_18190 0.48 -1.7 4,004,793 + AO353_18190 0.48 -0.3 4,004,793 + AO353_18190 0.48 +0.5 4,004,793 + AO353_18190 0.48 -1.2 4,004,793 + AO353_18190 0.48 -0.5 4,004,793 + AO353_18190 0.48 -1.7 4,004,793 + AO353_18190 0.48 +0.5 4,004,793 + AO353_18190 0.48 -2.1 4,004,793 + AO353_18190 0.48 +0.2 4,004,793 + AO353_18190 0.48 -0.1 4,004,793 + AO353_18190 0.48 +3.9 4,004,793 + AO353_18190 0.48 +1.1 4,004,794 - AO353_18190 0.48 +0.9 4,004,794 - AO353_18190 0.48 -1.1 4,004,794 - AO353_18190 0.48 -2.0 4,004,794 - AO353_18190 0.48 +0.9 4,004,794 - AO353_18190 0.48 -0.9 4,004,794 - AO353_18190 0.48 +1.8 4,004,794 - AO353_18190 0.48 +0.9 4,004,794 - AO353_18190 0.48 +1.9 4,004,794 - AO353_18190 0.48 -0.1 4,004,794 - AO353_18190 0.48 +0.9 4,004,794 - AO353_18190 0.48 +0.4 4,004,794 - AO353_18190 0.48 -1.7 4,004,911 + AO353_18190 0.66 +0.4 4,004,911 + AO353_18190 0.66 +1.0 4,004,911 + AO353_18190 0.66 -0.8 4,004,911 + AO353_18190 0.66 -0.8 4,004,912 - AO353_18190 0.66 -0.7 4,005,064 - AO353_18190 0.90 +0.5 4,005,064 - AO353_18190 0.90 +0.0 4,005,064 - AO353_18190 0.90 +1.8 4,005,075 + +0.3 4,005,075 + -3.6 4,005,075 + +0.2 4,005,075 + -1.5 4,005,075 + -0.1 4,005,075 + -0.7 4,005,075 + +0.9 4,005,076 - -1.7 4,005,076 - +0.2 4,005,076 - -2.5 4,005,076 - -0.7 4,005,076 - -0.1 4,005,085 - +1.9 4,005,087 + +1.1 4,005,087 + -0.8 4,005,087 + -1.1 4,005,087 + -0.2 4,005,087 + +0.3 4,005,087 + +2.5 4,005,088 - -0.3 4,005,088 - +0.3 4,005,088 - -0.7 4,005,088 - +0.7 4,005,164 + -1.3 4,005,164 + +0.3 4,005,165 - +0.9 4,005,165 - +1.1 4,005,165 - +1.3 4,005,172 - +1.3
Or see this region's nucleotide sequence