Experiment: Benzalkonium Chloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12700 and AO353_12705 are separated by 359 nucleotides AO353_12705 and AO353_12710 are separated by 190 nucleotides AO353_12710 and AO353_12715 are separated by 312 nucleotides
AO353_12700: AO353_12700 - 3-oxoacyl-ACP synthase, at 2,793,697 to 2,794,416
_12700
AO353_12705: AO353_12705 - cobalamin biosynthesis protein CobQ, at 2,794,776 to 2,795,546
_12705
AO353_12710: AO353_12710 - thioredoxin, at 2,795,737 to 2,796,171
_12710
AO353_12715: AO353_12715 - hypothetical protein, at 2,796,484 to 2,796,810
_12715
Position (kb)
2794
2795
2796 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2793.816 kb on + strand, within AO353_12700 at 2793.915 kb on - strand, within AO353_12700 at 2793.915 kb on - strand, within AO353_12700 at 2793.991 kb on + strand, within AO353_12700 at 2793.991 kb on + strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2794.236 kb on + strand, within AO353_12700 at 2794.237 kb on - strand, within AO353_12700 at 2794.237 kb on - strand, within AO353_12700 at 2794.237 kb on - strand, within AO353_12700 at 2794.237 kb on - strand, within AO353_12700 at 2794.295 kb on - strand, within AO353_12700 at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.541 kb on - strand at 2794.541 kb on - strand at 2794.541 kb on - strand at 2794.616 kb on + strand at 2794.616 kb on + strand at 2794.617 kb on - strand at 2794.617 kb on - strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.759 kb on + strand at 2794.760 kb on - strand at 2794.823 kb on + strand at 2794.911 kb on + strand, within AO353_12705 at 2794.911 kb on + strand, within AO353_12705 at 2794.912 kb on - strand, within AO353_12705 at 2794.912 kb on - strand, within AO353_12705 at 2795.012 kb on + strand, within AO353_12705 at 2795.013 kb on - strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.017 kb on - strand, within AO353_12705 at 2795.017 kb on - strand, within AO353_12705 at 2795.017 kb on - strand, within AO353_12705 at 2795.145 kb on + strand, within AO353_12705 at 2795.145 kb on + strand, within AO353_12705 at 2795.146 kb on - strand, within AO353_12705 at 2795.187 kb on + strand, within AO353_12705 at 2795.187 kb on + strand, within AO353_12705 at 2795.266 kb on - strand, within AO353_12705 at 2795.421 kb on + strand, within AO353_12705 at 2795.421 kb on + strand, within AO353_12705 at 2795.421 kb on + strand, within AO353_12705 at 2795.421 kb on + strand, within AO353_12705 at 2795.422 kb on - strand, within AO353_12705 at 2795.422 kb on - strand, within AO353_12705 at 2795.422 kb on - strand, within AO353_12705 at 2795.638 kb on + strand at 2795.638 kb on + strand at 2795.638 kb on + strand at 2795.639 kb on - strand at 2795.639 kb on - strand at 2795.639 kb on - strand at 2795.639 kb on - strand at 2795.639 kb on - strand at 2795.641 kb on + strand at 2795.641 kb on + strand at 2795.641 kb on + strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.725 kb on + strand at 2795.725 kb on + strand at 2795.725 kb on + strand at 2795.725 kb on + strand at 2795.726 kb on - strand at 2795.726 kb on - strand at 2795.726 kb on - strand at 2795.751 kb on + strand at 2795.751 kb on + strand at 2795.752 kb on - strand at 2795.752 kb on - strand at 2796.026 kb on + strand, within AO353_12710 at 2796.226 kb on + strand at 2796.242 kb on + strand at 2796.243 kb on - strand at 2796.243 kb on - strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.430 kb on + strand at 2796.430 kb on + strand at 2796.430 kb on + strand at 2796.430 kb on + strand at 2796.430 kb on + strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.438 kb on + strand at 2796.439 kb on - strand at 2796.439 kb on - strand at 2796.439 kb on - strand at 2796.439 kb on - strand at 2796.439 kb on - strand at 2796.468 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.01 mg/ml remove 2,793,816 + AO353_12700 0.17 -0.7 2,793,915 - AO353_12700 0.30 -0.2 2,793,915 - AO353_12700 0.30 -0.1 2,793,991 + AO353_12700 0.41 -0.9 2,793,991 + AO353_12700 0.41 -0.6 2,793,992 - AO353_12700 0.41 -0.4 2,793,992 - AO353_12700 0.41 +0.5 2,793,992 - AO353_12700 0.41 +1.4 2,793,992 - AO353_12700 0.41 +2.0 2,793,992 - AO353_12700 0.41 -0.9 2,794,236 + AO353_12700 0.75 -1.9 2,794,237 - AO353_12700 0.75 -0.0 2,794,237 - AO353_12700 0.75 -0.1 2,794,237 - AO353_12700 0.75 +1.1 2,794,237 - AO353_12700 0.75 +2.6 2,794,295 - AO353_12700 0.83 +0.9 2,794,540 + -0.5 2,794,540 + -0.6 2,794,540 + +0.2 2,794,540 + +1.7 2,794,540 + -0.5 2,794,540 + +0.0 2,794,540 + -1.8 2,794,541 - +0.9 2,794,541 - +0.4 2,794,541 - -0.8 2,794,616 + +2.4 2,794,616 + -0.7 2,794,617 - -0.5 2,794,617 - -0.1 2,794,739 + -1.7 2,794,739 + -0.9 2,794,739 + +0.4 2,794,739 + -1.1 2,794,739 + -1.2 2,794,739 + -1.9 2,794,739 + +0.1 2,794,739 + +0.8 2,794,739 + -0.9 2,794,740 - +0.0 2,794,740 - -1.1 2,794,740 - -1.0 2,794,740 - -1.2 2,794,740 - +0.8 2,794,740 - -0.9 2,794,740 - -0.3 2,794,740 - +0.4 2,794,740 - -0.0 2,794,740 - -0.2 2,794,740 - -0.7 2,794,740 - -0.9 2,794,759 + -0.8 2,794,760 - +0.4 2,794,823 + -1.6 2,794,911 + AO353_12705 0.18 -1.9 2,794,911 + AO353_12705 0.18 -0.6 2,794,912 - AO353_12705 0.18 +1.0 2,794,912 - AO353_12705 0.18 -0.6 2,795,012 + AO353_12705 0.31 +0.7 2,795,013 - AO353_12705 0.31 +1.0 2,795,016 + AO353_12705 0.31 -0.2 2,795,016 + AO353_12705 0.31 +0.2 2,795,016 + AO353_12705 0.31 -0.2 2,795,016 + AO353_12705 0.31 +0.4 2,795,016 + AO353_12705 0.31 +1.4 2,795,017 - AO353_12705 0.31 -0.9 2,795,017 - AO353_12705 0.31 +2.0 2,795,017 - AO353_12705 0.31 +1.4 2,795,145 + AO353_12705 0.48 -0.9 2,795,145 + AO353_12705 0.48 -2.3 2,795,146 - AO353_12705 0.48 -2.4 2,795,187 + AO353_12705 0.53 +1.1 2,795,187 + AO353_12705 0.53 -0.4 2,795,266 - AO353_12705 0.64 +0.8 2,795,421 + AO353_12705 0.84 +1.4 2,795,421 + AO353_12705 0.84 -1.5 2,795,421 + AO353_12705 0.84 +0.5 2,795,421 + AO353_12705 0.84 -1.3 2,795,422 - AO353_12705 0.84 +1.1 2,795,422 - AO353_12705 0.84 -3.0 2,795,422 - AO353_12705 0.84 +0.6 2,795,638 + +1.5 2,795,638 + -1.0 2,795,638 + -1.2 2,795,639 - -1.9 2,795,639 - -1.3 2,795,639 - -0.1 2,795,639 - +1.4 2,795,639 - -1.2 2,795,641 + +0.1 2,795,641 + +0.7 2,795,641 + -0.5 2,795,642 - -0.0 2,795,642 - +1.6 2,795,642 - -2.6 2,795,642 - +1.8 2,795,642 - -0.2 2,795,642 - +1.2 2,795,642 - -0.4 2,795,642 - -1.4 2,795,642 - -0.8 2,795,642 - +0.4 2,795,642 - -1.4 2,795,725 + -0.9 2,795,725 + +0.8 2,795,725 + +0.4 2,795,725 + +2.0 2,795,726 - -0.5 2,795,726 - -1.9 2,795,726 - +0.8 2,795,751 + +0.4 2,795,751 + +0.4 2,795,752 - +0.4 2,795,752 - +0.1 2,796,026 + AO353_12710 0.66 -0.5 2,796,226 + -0.3 2,796,242 + +0.3 2,796,243 - -0.9 2,796,243 - -1.2 2,796,288 + +0.2 2,796,288 + -0.2 2,796,288 + +0.2 2,796,288 + +1.0 2,796,288 + +0.3 2,796,288 + -0.8 2,796,289 - -0.4 2,796,289 - -0.6 2,796,289 - +0.7 2,796,289 - -0.6 2,796,289 - +2.2 2,796,289 - -0.2 2,796,430 + -1.6 2,796,430 + +0.4 2,796,430 + +0.7 2,796,430 + -0.2 2,796,430 + -0.2 2,796,431 - -0.2 2,796,431 - +0.0 2,796,431 - +0.8 2,796,431 - +1.5 2,796,431 - -1.6 2,796,431 - -0.1 2,796,431 - -0.7 2,796,431 - -0.2 2,796,431 - -0.2 2,796,431 - -0.6 2,796,434 + -0.8 2,796,434 + -0.6 2,796,434 + +0.3 2,796,434 + -2.0 2,796,434 + +1.4 2,796,434 + -1.6 2,796,434 + -0.5 2,796,434 + -0.0 2,796,434 + +0.2 2,796,434 + +0.8 2,796,434 + +1.1 2,796,434 + +0.0 2,796,434 + +0.2 2,796,434 + +0.4 2,796,434 + -1.2 2,796,435 - +2.8 2,796,435 - -0.4 2,796,435 - +0.2 2,796,435 - +0.2 2,796,435 - -2.2 2,796,435 - +0.8 2,796,435 - -2.1 2,796,435 - +1.7 2,796,435 - -0.2 2,796,435 - +0.3 2,796,435 - -0.6 2,796,435 - +1.4 2,796,435 - +0.4 2,796,435 - +1.0 2,796,435 - -0.2 2,796,435 - +0.1 2,796,435 - -0.8 2,796,435 - +1.0 2,796,438 + -0.0 2,796,439 - +0.7 2,796,439 - +1.4 2,796,439 - +0.3 2,796,439 - -0.3 2,796,439 - +3.2 2,796,468 - -0.0
Or see this region's nucleotide sequence