Experiment: Benzalkonium Chloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09295 and AO353_09300 are separated by 189 nucleotides AO353_09300 and AO353_09305 are separated by 6 nucleotides AO353_09305 and AO353_09310 overlap by 4 nucleotides
AO353_09295: AO353_09295 - oxidoreductase, at 2,037,810 to 2,038,667
_09295
AO353_09300: AO353_09300 - biopolymer transporter ExbB, at 2,038,857 to 2,039,852
_09300
AO353_09305: AO353_09305 - protein TolR, at 2,039,859 to 2,040,287
_09305
AO353_09310: AO353_09310 - energy transducer TonB, at 2,040,284 to 2,041,033
_09310
Position (kb)
2038
2039
2040 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2037.962 kb on - strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.111 kb on + strand, within AO353_09295 at 2038.111 kb on + strand, within AO353_09295 at 2038.111 kb on + strand, within AO353_09295 at 2038.112 kb on - strand, within AO353_09295 at 2038.112 kb on - strand, within AO353_09295 at 2038.112 kb on - strand, within AO353_09295 at 2038.112 kb on - strand, within AO353_09295 at 2038.138 kb on + strand, within AO353_09295 at 2038.183 kb on + strand, within AO353_09295 at 2038.183 kb on + strand, within AO353_09295 at 2038.183 kb on + strand, within AO353_09295 at 2038.227 kb on + strand, within AO353_09295 at 2038.227 kb on + strand, within AO353_09295 at 2038.228 kb on - strand, within AO353_09295 at 2038.324 kb on + strand, within AO353_09295 at 2038.324 kb on + strand, within AO353_09295 at 2038.324 kb on + strand, within AO353_09295 at 2038.373 kb on - strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.462 kb on + strand, within AO353_09295 at 2038.462 kb on + strand, within AO353_09295 at 2038.462 kb on + strand at 2038.462 kb on + strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.471 kb on + strand, within AO353_09295 at 2038.471 kb on + strand, within AO353_09295 at 2038.471 kb on + strand, within AO353_09295 at 2038.471 kb on + strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.690 kb on + strand at 2038.690 kb on + strand at 2038.690 kb on + strand at 2038.691 kb on - strand at 2038.691 kb on - strand at 2038.691 kb on - strand at 2038.691 kb on - strand at 2038.706 kb on + strand at 2038.747 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.843 kb on + strand at 2038.843 kb on + strand at 2038.843 kb on + strand at 2038.843 kb on + strand at 2038.843 kb on + strand at 2039.845 kb on + strand at 2039.845 kb on + strand at 2039.845 kb on + strand at 2039.845 kb on + strand at 2039.845 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.01 mg/ml remove 2,037,962 - AO353_09295 0.18 -0.8 2,038,021 + AO353_09295 0.25 +1.1 2,038,021 + AO353_09295 0.25 +0.9 2,038,021 + AO353_09295 0.25 +0.5 2,038,021 + AO353_09295 0.25 +0.5 2,038,021 + AO353_09295 0.25 -0.7 2,038,021 + AO353_09295 0.25 -0.1 2,038,021 + AO353_09295 0.25 +0.9 2,038,021 + AO353_09295 0.25 +0.1 2,038,021 + AO353_09295 0.25 -0.6 2,038,021 + AO353_09295 0.25 -1.8 2,038,022 - AO353_09295 0.25 -0.9 2,038,022 - AO353_09295 0.25 -0.6 2,038,022 - AO353_09295 0.25 -0.6 2,038,022 - AO353_09295 0.25 -1.1 2,038,022 - AO353_09295 0.25 -0.4 2,038,022 - AO353_09295 0.25 +0.5 2,038,022 - AO353_09295 0.25 +0.9 2,038,022 - AO353_09295 0.25 -0.7 2,038,022 - AO353_09295 0.25 +1.1 2,038,022 - AO353_09295 0.25 -0.2 2,038,022 - AO353_09295 0.25 +1.8 2,038,022 - AO353_09295 0.25 +2.1 2,038,022 - AO353_09295 0.25 +1.3 2,038,022 - AO353_09295 0.25 -0.4 2,038,022 - AO353_09295 0.25 +0.8 2,038,022 - AO353_09295 0.25 +0.5 2,038,022 - AO353_09295 0.25 +0.1 2,038,022 - AO353_09295 0.25 +1.5 2,038,022 - AO353_09295 0.25 -0.1 2,038,022 - AO353_09295 0.25 +2.1 2,038,022 - AO353_09295 0.25 +0.7 2,038,022 - AO353_09295 0.25 -1.1 2,038,111 + AO353_09295 0.35 +0.1 2,038,111 + AO353_09295 0.35 +1.1 2,038,111 + AO353_09295 0.35 -1.3 2,038,112 - AO353_09295 0.35 -0.7 2,038,112 - AO353_09295 0.35 +0.0 2,038,112 - AO353_09295 0.35 -0.6 2,038,112 - AO353_09295 0.35 -0.8 2,038,138 + AO353_09295 0.38 +0.0 2,038,183 + AO353_09295 0.43 +0.9 2,038,183 + AO353_09295 0.43 -1.7 2,038,183 + AO353_09295 0.43 +0.9 2,038,227 + AO353_09295 0.49 -2.5 2,038,227 + AO353_09295 0.49 +0.9 2,038,228 - AO353_09295 0.49 +0.5 2,038,324 + AO353_09295 0.60 -0.5 2,038,324 + AO353_09295 0.60 +1.5 2,038,324 + AO353_09295 0.60 -2.3 2,038,373 - AO353_09295 0.66 +0.1 2,038,414 + AO353_09295 0.70 +0.9 2,038,414 + AO353_09295 0.70 +1.3 2,038,414 + AO353_09295 0.70 -0.1 2,038,414 + AO353_09295 0.70 +1.5 2,038,414 + AO353_09295 0.70 -0.7 2,038,415 - AO353_09295 0.71 +0.5 2,038,415 - AO353_09295 0.71 +3.1 2,038,415 - AO353_09295 0.71 -2.2 2,038,415 - AO353_09295 0.71 +0.3 2,038,415 - AO353_09295 0.71 +2.0 2,038,462 + AO353_09295 0.76 -0.8 2,038,462 + AO353_09295 0.76 +1.2 2,038,462 + +1.5 2,038,462 + AO353_09295 0.76 +0.7 2,038,463 - AO353_09295 0.76 +0.9 2,038,463 - AO353_09295 0.76 -2.1 2,038,463 - AO353_09295 0.76 +0.6 2,038,463 - AO353_09295 0.76 +0.2 2,038,463 - AO353_09295 0.76 -0.3 2,038,463 - AO353_09295 0.76 +1.3 2,038,463 - AO353_09295 0.76 +0.3 2,038,471 + AO353_09295 0.77 +0.6 2,038,471 + AO353_09295 0.77 +4.3 2,038,471 + AO353_09295 0.77 -1.1 2,038,471 + AO353_09295 0.77 -2.2 2,038,472 - AO353_09295 0.77 +0.2 2,038,472 - AO353_09295 0.77 +0.4 2,038,472 - AO353_09295 0.77 -1.1 2,038,472 - AO353_09295 0.77 +1.3 2,038,472 - AO353_09295 0.77 +0.5 2,038,690 + +0.8 2,038,690 + +0.3 2,038,690 + -1.1 2,038,691 - -0.5 2,038,691 - +1.5 2,038,691 - -0.3 2,038,691 - -0.0 2,038,706 + -1.5 2,038,747 + +2.1 2,038,825 + +0.2 2,038,825 + -0.1 2,038,825 + -0.1 2,038,825 + +0.7 2,038,825 + -1.8 2,038,825 + -1.4 2,038,825 + -0.3 2,038,825 + -1.1 2,038,843 + -2.8 2,038,843 + -2.4 2,038,843 + -1.5 2,038,843 + -1.1 2,038,843 + -2.2 2,039,845 + +1.5 2,039,845 + +1.1 2,039,845 + -0.8 2,039,845 + +1.2 2,039,845 + +0.1
Or see this region's nucleotide sequence