Experiment: Benzalkonium Chloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03545 and AO353_03550 are separated by 6 nucleotides AO353_03550 and AO353_03555 are separated by 52 nucleotides AO353_03555 and AO353_03560 are separated by 38 nucleotides
AO353_03545: AO353_03545 - hypothetical protein, at 759,337 to 760,170
_03545
AO353_03550: AO353_03550 - peptidoglycan-binding protein, at 760,177 to 760,674
_03550
AO353_03555: AO353_03555 - translocation protein TolB, at 760,727 to 761,986
_03555
AO353_03560: AO353_03560 - protein TolA, at 762,025 to 763,104
_03560
Position (kb) 760
761
762 Strain fitness (log2 ratio) -2
-1
0
1
2 at 759.783 kb on + strand, within AO353_03545 at 759.846 kb on + strand, within AO353_03545 at 759.898 kb on + strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 760.019 kb on + strand, within AO353_03545 at 760.032 kb on + strand, within AO353_03545 at 760.032 kb on + strand, within AO353_03545 at 760.038 kb on - strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.147 kb on + strand at 760.147 kb on + strand at 760.147 kb on + strand at 760.148 kb on - strand at 760.148 kb on - strand at 760.178 kb on + strand at 760.178 kb on + strand at 760.178 kb on + strand at 760.178 kb on + strand at 760.178 kb on + strand at 760.179 kb on - strand at 760.179 kb on - strand at 760.179 kb on - strand at 760.179 kb on - strand at 760.182 kb on + strand at 760.183 kb on - strand at 760.183 kb on - strand at 760.183 kb on - strand at 760.183 kb on - strand at 760.183 kb on - strand at 760.687 kb on - strand at 760.687 kb on - strand at 760.705 kb on - strand at 760.705 kb on - strand at 760.705 kb on - strand at 760.705 kb on - strand at 760.705 kb on - strand at 760.709 kb on - strand at 760.709 kb on - strand at 760.738 kb on - strand at 762.035 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.01 mg/ml remove 759,783 + AO353_03545 0.53 -0.6 759,846 + AO353_03545 0.61 -0.6 759,898 + AO353_03545 0.67 -0.6 759,899 - AO353_03545 0.67 -0.6 759,899 - AO353_03545 0.67 -1.6 759,899 - AO353_03545 0.67 -1.0 759,899 - AO353_03545 0.67 -1.6 759,899 - AO353_03545 0.67 -0.0 759,899 - AO353_03545 0.67 -0.0 760,019 + AO353_03545 0.82 -1.1 760,032 + AO353_03545 0.83 +0.4 760,032 + AO353_03545 0.83 +1.0 760,038 - AO353_03545 0.84 -1.8 760,071 + AO353_03545 0.88 -1.0 760,071 + AO353_03545 0.88 -0.6 760,071 + AO353_03545 0.88 -1.2 760,071 + AO353_03545 0.88 -2.7 760,071 + AO353_03545 0.88 -0.8 760,071 + AO353_03545 0.88 -1.9 760,072 - AO353_03545 0.88 -1.3 760,072 - AO353_03545 0.88 -0.3 760,072 - AO353_03545 0.88 +1.2 760,072 - AO353_03545 0.88 -0.6 760,072 - AO353_03545 0.88 -1.3 760,072 - AO353_03545 0.88 -0.0 760,072 - AO353_03545 0.88 +0.2 760,147 + +0.6 760,147 + -1.8 760,147 + -1.6 760,148 - -1.3 760,148 - -1.0 760,178 + -0.6 760,178 + -2.2 760,178 + -1.8 760,178 + -0.6 760,178 + -2.0 760,179 - -0.3 760,179 - +0.7 760,179 - -1.0 760,179 - -1.4 760,182 + -1.3 760,183 - +0.8 760,183 - -0.6 760,183 - -0.3 760,183 - -2.6 760,183 - +2.6 760,687 - -1.2 760,687 - -0.7 760,705 - -1.6 760,705 - -1.8 760,705 - -1.6 760,705 - -2.0 760,705 - -0.1 760,709 - -0.6 760,709 - -0.4 760,738 - +0.4 762,035 - -1.0
Or see this region's nucleotide sequence