Experiment: Benzalkonium Chloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01310 and AO353_01315 are separated by 140 nucleotides AO353_01315 and AO353_01320 are separated by 79 nucleotides
AO353_01310: AO353_01310 - radical SAM protein, at 284,196 to 285,164
_01310
AO353_01315: AO353_01315 - TetR family transcriptional regulator, at 285,305 to 285,943
_01315
AO353_01320: AO353_01320 - class V aminotransferase, at 286,023 to 287,156
_01320
Position (kb) 285
286 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 284.333 kb on - strand, within AO353_01310 at 284.333 kb on - strand, within AO353_01310 at 284.333 kb on - strand, within AO353_01310 at 284.333 kb on - strand, within AO353_01310 at 284.333 kb on - strand, within AO353_01310 at 284.333 kb on - strand, within AO353_01310 at 284.333 kb on - strand, within AO353_01310 at 284.333 kb on - strand, within AO353_01310 at 284.506 kb on + strand, within AO353_01310 at 284.507 kb on - strand, within AO353_01310 at 284.512 kb on + strand, within AO353_01310 at 284.512 kb on + strand, within AO353_01310 at 284.644 kb on + strand, within AO353_01310 at 284.645 kb on - strand, within AO353_01310 at 284.645 kb on - strand, within AO353_01310 at 285.007 kb on + strand, within AO353_01310 at 285.007 kb on + strand, within AO353_01310 at 285.008 kb on - strand, within AO353_01310 at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.089 kb on + strand at 285.089 kb on + strand at 285.089 kb on + strand at 285.089 kb on + strand at 285.090 kb on - strand at 285.090 kb on - strand at 285.090 kb on - strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.098 kb on - strand at 285.098 kb on - strand at 285.098 kb on - strand at 285.098 kb on - strand at 285.183 kb on + strand at 285.183 kb on + strand at 285.184 kb on - strand at 285.184 kb on - strand at 285.224 kb on + strand at 285.230 kb on + strand at 285.230 kb on + strand at 285.231 kb on - strand at 285.231 kb on - strand at 285.244 kb on + strand at 285.244 kb on + strand at 285.245 kb on - strand at 285.245 kb on - strand at 285.245 kb on - strand at 285.245 kb on - strand at 285.247 kb on - strand at 285.247 kb on - strand at 285.267 kb on + strand at 285.267 kb on + strand at 285.267 kb on + strand at 285.268 kb on - strand at 285.288 kb on + strand at 285.289 kb on - strand at 285.426 kb on + strand, within AO353_01315 at 285.427 kb on - strand, within AO353_01315 at 285.468 kb on + strand, within AO353_01315 at 285.468 kb on + strand, within AO353_01315 at 285.469 kb on - strand, within AO353_01315 at 285.478 kb on - strand, within AO353_01315 at 285.478 kb on - strand, within AO353_01315 at 285.478 kb on - strand, within AO353_01315 at 285.669 kb on + strand, within AO353_01315 at 285.670 kb on - strand, within AO353_01315 at 285.670 kb on - strand, within AO353_01315 at 285.691 kb on + strand, within AO353_01315 at 285.742 kb on - strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.792 kb on + strand, within AO353_01315 at 285.792 kb on + strand, within AO353_01315 at 285.792 kb on + strand, within AO353_01315 at 285.792 kb on + strand at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.925 kb on + strand at 285.925 kb on + strand at 285.937 kb on + strand at 285.937 kb on + strand at 285.938 kb on - strand at 285.938 kb on - strand at 285.943 kb on + strand at 285.944 kb on - strand at 285.958 kb on - strand at 285.969 kb on + strand at 285.969 kb on + strand at 285.970 kb on - strand at 285.981 kb on + strand at 285.985 kb on - strand at 285.985 kb on - strand at 285.991 kb on - strand at 285.991 kb on - strand at 285.991 kb on - strand at 285.991 kb on - strand at 286.028 kb on + strand at 286.029 kb on - strand at 286.048 kb on + strand at 286.049 kb on - strand at 286.147 kb on + strand, within AO353_01320 at 286.147 kb on + strand, within AO353_01320 at 286.147 kb on + strand, within AO353_01320 at 286.164 kb on + strand, within AO353_01320 at 286.221 kb on - strand, within AO353_01320 at 286.259 kb on + strand, within AO353_01320 at 286.260 kb on - strand, within AO353_01320 at 286.605 kb on + strand, within AO353_01320 at 286.605 kb on + strand, within AO353_01320 at 286.605 kb on + strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.749 kb on + strand, within AO353_01320 at 286.749 kb on + strand, within AO353_01320 at 286.750 kb on - strand, within AO353_01320 at 286.750 kb on - strand, within AO353_01320 at 286.942 kb on + strand, within AO353_01320
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.01 mg/ml remove 284,333 - AO353_01310 0.14 +0.2 284,333 - AO353_01310 0.14 -1.2 284,333 - AO353_01310 0.14 +0.5 284,333 - AO353_01310 0.14 +0.3 284,333 - AO353_01310 0.14 +0.2 284,333 - AO353_01310 0.14 -1.5 284,333 - AO353_01310 0.14 -0.6 284,333 - AO353_01310 0.14 -0.1 284,506 + AO353_01310 0.32 +1.4 284,507 - AO353_01310 0.32 +0.8 284,512 + AO353_01310 0.33 +0.8 284,512 + AO353_01310 0.33 +1.4 284,644 + AO353_01310 0.46 -0.2 284,645 - AO353_01310 0.46 -1.8 284,645 - AO353_01310 0.46 -0.3 285,007 + AO353_01310 0.84 +0.8 285,007 + AO353_01310 0.84 -0.8 285,008 - AO353_01310 0.84 +1.6 285,085 + -1.0 285,085 + +0.8 285,085 + +1.4 285,085 + -0.1 285,085 + -0.9 285,085 + -1.4 285,085 + -0.2 285,085 + +0.2 285,085 + -0.5 285,086 - -0.8 285,086 - -0.5 285,086 - +1.1 285,086 - +0.1 285,086 - -0.6 285,086 - +0.0 285,089 + +1.4 285,089 + +1.8 285,089 + -0.2 285,089 + +0.0 285,090 - -1.2 285,090 - +0.8 285,090 - -0.6 285,097 + +1.3 285,097 + +0.2 285,097 + -0.4 285,097 + +1.0 285,097 + -1.8 285,097 + -0.4 285,097 + -1.5 285,098 - +0.8 285,098 - +1.1 285,098 - -1.2 285,098 - +1.4 285,183 + +0.8 285,183 + -0.8 285,184 - -0.4 285,184 - +0.4 285,224 + -1.7 285,230 + -0.5 285,230 + -1.2 285,231 - +0.8 285,231 - +0.0 285,244 + +0.2 285,244 + -1.1 285,245 - -0.1 285,245 - +0.9 285,245 - +0.4 285,245 - +0.8 285,247 - +0.4 285,247 - +1.2 285,267 + -2.8 285,267 + +1.8 285,267 + +0.6 285,268 - +0.4 285,288 + -0.8 285,289 - +0.8 285,426 + AO353_01315 0.19 +0.8 285,427 - AO353_01315 0.19 +1.8 285,468 + AO353_01315 0.26 -0.2 285,468 + AO353_01315 0.26 -1.5 285,469 - AO353_01315 0.26 +2.7 285,478 - AO353_01315 0.27 +1.1 285,478 - AO353_01315 0.27 +0.9 285,478 - AO353_01315 0.27 -0.5 285,669 + AO353_01315 0.57 +0.8 285,670 - AO353_01315 0.57 -0.3 285,670 - AO353_01315 0.57 +0.5 285,691 + AO353_01315 0.60 -2.2 285,742 - AO353_01315 0.68 -0.3 285,762 + AO353_01315 0.72 +0.8 285,762 + AO353_01315 0.72 +1.4 285,762 + AO353_01315 0.72 +1.7 285,762 + AO353_01315 0.72 +0.7 285,762 + AO353_01315 0.72 +0.2 285,762 + AO353_01315 0.72 +0.1 285,762 + AO353_01315 0.72 +1.5 285,763 - AO353_01315 0.72 +1.4 285,763 - AO353_01315 0.72 +2.1 285,763 - AO353_01315 0.72 -0.5 285,763 - AO353_01315 0.72 +0.2 285,763 - AO353_01315 0.72 +2.1 285,763 - AO353_01315 0.72 +0.4 285,763 - AO353_01315 0.72 +0.8 285,792 + AO353_01315 0.76 +0.2 285,792 + AO353_01315 0.76 +0.2 285,792 + AO353_01315 0.76 -0.4 285,792 + +1.1 285,793 - AO353_01315 0.76 +0.8 285,793 - AO353_01315 0.76 -0.6 285,793 - AO353_01315 0.76 -1.2 285,793 - AO353_01315 0.76 +1.4 285,793 - AO353_01315 0.76 +3.4 285,793 - AO353_01315 0.76 +0.0 285,793 - AO353_01315 0.76 +1.7 285,925 + +0.0 285,925 + -1.5 285,937 + +0.1 285,937 + +0.3 285,938 - +1.8 285,938 - +0.4 285,943 + -0.8 285,944 - +1.7 285,958 - -0.8 285,969 + +0.1 285,969 + -0.0 285,970 - -0.8 285,981 + -0.1 285,985 - +1.4 285,985 - -0.5 285,991 - +0.2 285,991 - -0.3 285,991 - +0.7 285,991 - -2.2 286,028 + -0.2 286,029 - -0.8 286,048 + +0.7 286,049 - -0.6 286,147 + AO353_01320 0.11 +0.0 286,147 + AO353_01320 0.11 -0.0 286,147 + AO353_01320 0.11 +1.8 286,164 + AO353_01320 0.12 +0.2 286,221 - AO353_01320 0.17 -0.8 286,259 + AO353_01320 0.21 +0.3 286,260 - AO353_01320 0.21 -1.2 286,605 + AO353_01320 0.51 +1.5 286,605 + AO353_01320 0.51 +2.5 286,605 + AO353_01320 0.51 -0.4 286,606 - AO353_01320 0.51 +0.4 286,606 - AO353_01320 0.51 +0.4 286,606 - AO353_01320 0.51 -2.0 286,606 - AO353_01320 0.51 +0.1 286,606 - AO353_01320 0.51 +0.8 286,606 - AO353_01320 0.51 +1.6 286,674 + AO353_01320 0.57 -0.0 286,674 + AO353_01320 0.57 -2.7 286,674 + AO353_01320 0.57 +0.3 286,674 + AO353_01320 0.57 -1.2 286,674 + AO353_01320 0.57 +0.8 286,674 + AO353_01320 0.57 +0.4 286,674 + AO353_01320 0.57 -2.8 286,674 + AO353_01320 0.57 -2.2 286,674 + AO353_01320 0.57 +0.2 286,674 + AO353_01320 0.57 -1.4 286,674 + AO353_01320 0.57 +2.2 286,674 + AO353_01320 0.57 -0.8 286,674 + AO353_01320 0.57 +1.3 286,674 + AO353_01320 0.57 +0.7 286,674 + AO353_01320 0.57 +0.8 286,674 + AO353_01320 0.57 -0.5 286,674 + AO353_01320 0.57 +0.8 286,674 + AO353_01320 0.57 +0.2 286,674 + AO353_01320 0.57 -0.5 286,674 + AO353_01320 0.57 -0.8 286,674 + AO353_01320 0.57 -2.7 286,674 + AO353_01320 0.57 +0.8 286,674 + AO353_01320 0.57 +0.3 286,674 + AO353_01320 0.57 +0.2 286,674 + AO353_01320 0.57 +1.7 286,674 + AO353_01320 0.57 -1.7 286,674 + AO353_01320 0.57 -0.0 286,674 + AO353_01320 0.57 +0.2 286,675 - AO353_01320 0.57 -2.5 286,675 - AO353_01320 0.57 +0.8 286,675 - AO353_01320 0.57 -1.5 286,675 - AO353_01320 0.57 -1.2 286,675 - AO353_01320 0.57 +0.2 286,675 - AO353_01320 0.57 +0.1 286,675 - AO353_01320 0.57 -0.8 286,675 - AO353_01320 0.57 +0.8 286,675 - AO353_01320 0.57 +0.5 286,675 - AO353_01320 0.57 +0.2 286,675 - AO353_01320 0.57 -0.6 286,675 - AO353_01320 0.57 -0.8 286,675 - AO353_01320 0.57 +1.4 286,675 - AO353_01320 0.57 +0.9 286,675 - AO353_01320 0.57 -0.9 286,675 - AO353_01320 0.57 -2.0 286,675 - AO353_01320 0.57 +0.8 286,675 - AO353_01320 0.57 -0.4 286,675 - AO353_01320 0.57 -2.0 286,675 - AO353_01320 0.57 +0.4 286,675 - AO353_01320 0.57 -0.3 286,675 - AO353_01320 0.57 +0.1 286,675 - AO353_01320 0.57 +1.4 286,675 - AO353_01320 0.57 -0.8 286,678 + AO353_01320 0.58 +0.8 286,678 + AO353_01320 0.58 -1.0 286,678 + AO353_01320 0.58 -0.8 286,678 + AO353_01320 0.58 +0.1 286,678 + AO353_01320 0.58 -0.4 286,679 - AO353_01320 0.58 +0.1 286,679 - AO353_01320 0.58 -2.5 286,679 - AO353_01320 0.58 +0.6 286,749 + AO353_01320 0.64 -0.1 286,749 + AO353_01320 0.64 +1.4 286,750 - AO353_01320 0.64 -0.4 286,750 - AO353_01320 0.64 -0.2 286,942 + AO353_01320 0.81 -1.8
Or see this region's nucleotide sequence