Experiment: Benzalkonium Chloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00460 and AO353_00465 are separated by 252 nucleotides AO353_00465 and AO353_00470 are separated by 10 nucleotides AO353_00470 and AO353_00475 are separated by 106 nucleotides AO353_00475 and AO353_00480 are separated by 170 nucleotides
AO353_00460: AO353_00460 - TetR family transcriptional regulator, at 93,951 to 94,658
_00460
AO353_00465: AO353_00465 - LexA family transcriptional regulator, at 94,911 to 95,519
_00465
AO353_00470: AO353_00470 - CDP-glycerol--UDP-pyrophosphoryl-N- acetylglucosaminyl-N-acetylmannosamine glycerophosphotransferase, at 95,530 to 96,003
_00470
AO353_00475: AO353_00475 - hypothetical protein, at 96,110 to 96,343
_00475
AO353_00480: AO353_00480 - hypothetical protein, at 96,514 to 97,071
_00480
Position (kb) 95
96
97 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 94.693 kb on + strand at 94.693 kb on + strand at 94.693 kb on + strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.756 kb on + strand at 94.756 kb on + strand at 94.757 kb on - strand at 94.757 kb on - strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.763 kb on - strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.789 kb on - strand at 94.789 kb on - strand at 94.789 kb on - strand at 94.812 kb on + strand at 94.813 kb on - strand at 94.813 kb on - strand at 94.813 kb on - strand at 94.836 kb on + strand at 94.836 kb on + strand at 94.836 kb on + strand at 94.870 kb on - strand at 94.871 kb on + strand at 94.871 kb on + strand at 94.873 kb on + strand at 94.873 kb on + strand at 95.518 kb on - strand at 95.530 kb on - strand at 95.831 kb on + strand, within AO353_00470 at 95.831 kb on + strand, within AO353_00470 at 95.831 kb on + strand, within AO353_00470 at 95.831 kb on + strand, within AO353_00470 at 95.831 kb on + strand, within AO353_00470 at 95.831 kb on + strand, within AO353_00470 at 95.831 kb on + strand, within AO353_00470 at 95.831 kb on + strand, within AO353_00470 at 95.831 kb on + strand, within AO353_00470 at 95.832 kb on - strand, within AO353_00470 at 95.832 kb on - strand, within AO353_00470 at 95.832 kb on - strand, within AO353_00470 at 95.832 kb on - strand, within AO353_00470 at 95.906 kb on + strand, within AO353_00470 at 95.906 kb on + strand, within AO353_00470 at 95.906 kb on + strand, within AO353_00470 at 95.906 kb on + strand, within AO353_00470 at 95.906 kb on + strand, within AO353_00470 at 95.907 kb on - strand, within AO353_00470 at 95.907 kb on - strand, within AO353_00470 at 95.907 kb on - strand, within AO353_00470 at 95.907 kb on - strand, within AO353_00470 at 95.907 kb on - strand, within AO353_00470 at 95.907 kb on - strand, within AO353_00470 at 95.988 kb on + strand at 96.001 kb on + strand at 96.001 kb on + strand at 96.002 kb on - strand at 96.002 kb on - strand at 96.065 kb on - strand at 96.326 kb on + strand at 96.327 kb on - strand at 96.327 kb on - strand at 96.343 kb on + strand at 96.343 kb on + strand at 96.343 kb on + strand at 96.344 kb on - strand at 96.344 kb on - strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.374 kb on + strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.375 kb on - strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.376 kb on + strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.377 kb on - strand at 96.378 kb on + strand at 96.378 kb on + strand at 96.378 kb on + strand at 96.378 kb on + strand at 96.378 kb on + strand at 96.378 kb on + strand at 96.379 kb on - strand at 96.379 kb on - strand at 96.433 kb on + strand at 96.477 kb on + strand at 96.531 kb on - strand at 96.531 kb on - strand at 96.601 kb on - strand, within AO353_00480 at 96.601 kb on - strand, within AO353_00480 at 96.612 kb on + strand, within AO353_00480 at 96.613 kb on - strand, within AO353_00480 at 96.658 kb on - strand, within AO353_00480 at 96.811 kb on + strand, within AO353_00480 at 96.812 kb on - strand, within AO353_00480 at 96.893 kb on + strand, within AO353_00480 at 96.893 kb on + strand, within AO353_00480 at 96.893 kb on + strand, within AO353_00480 at 96.894 kb on - strand at 96.894 kb on - strand, within AO353_00480 at 96.894 kb on - strand, within AO353_00480 at 96.894 kb on - strand, within AO353_00480 at 96.957 kb on - strand, within AO353_00480 at 96.957 kb on - strand, within AO353_00480
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.01 mg/ml remove 94,693 + -0.8 94,693 + -0.8 94,693 + +0.1 94,694 - +0.4 94,694 - +0.2 94,694 - +0.3 94,694 - +0.5 94,752 + +2.4 94,752 + -0.6 94,752 + +0.1 94,752 + +1.1 94,752 + -0.4 94,752 + +1.0 94,752 + +0.8 94,752 + -1.2 94,752 + -1.2 94,752 + +0.2 94,753 - -1.8 94,753 - +0.0 94,753 - +1.1 94,753 - -0.1 94,753 - -0.1 94,753 - +0.2 94,753 - -2.2 94,756 + +0.8 94,756 + -0.8 94,757 - +1.4 94,757 - +2.1 94,762 + +0.8 94,762 + +1.2 94,762 + -1.1 94,762 + +0.2 94,762 + -0.2 94,762 + -0.2 94,762 + -0.8 94,763 - +0.8 94,788 + -0.2 94,788 + +0.8 94,788 + -0.2 94,788 + -0.3 94,788 + +0.4 94,789 - +1.1 94,789 - -0.8 94,789 - +0.0 94,812 + +0.1 94,813 - -0.8 94,813 - +0.6 94,813 - -1.2 94,836 + +0.4 94,836 + -0.8 94,836 + +0.0 94,870 - +0.6 94,871 + -0.5 94,871 + +0.6 94,873 + -1.2 94,873 + +0.2 95,518 - +1.5 95,530 - -0.7 95,831 + AO353_00470 0.64 +0.4 95,831 + AO353_00470 0.64 -0.1 95,831 + AO353_00470 0.64 +1.2 95,831 + AO353_00470 0.64 +1.4 95,831 + AO353_00470 0.64 +0.6 95,831 + AO353_00470 0.64 -1.5 95,831 + AO353_00470 0.64 -0.2 95,831 + AO353_00470 0.64 -0.8 95,831 + AO353_00470 0.64 +1.1 95,832 - AO353_00470 0.64 -2.0 95,832 - AO353_00470 0.64 +0.6 95,832 - AO353_00470 0.64 -2.8 95,832 - AO353_00470 0.64 +0.4 95,906 + AO353_00470 0.79 -0.0 95,906 + AO353_00470 0.79 +0.4 95,906 + AO353_00470 0.79 +1.9 95,906 + AO353_00470 0.79 +1.4 95,906 + AO353_00470 0.79 +0.1 95,907 - AO353_00470 0.80 -0.5 95,907 - AO353_00470 0.80 +0.4 95,907 - AO353_00470 0.80 -0.2 95,907 - AO353_00470 0.80 +0.2 95,907 - AO353_00470 0.80 +0.8 95,907 - AO353_00470 0.80 +1.8 95,988 + +0.8 96,001 + +2.9 96,001 + -0.0 96,002 - -0.6 96,002 - -0.2 96,065 - -1.2 96,326 + -0.3 96,327 - +0.3 96,327 - -0.2 96,343 + +0.8 96,343 + -1.0 96,343 + -0.8 96,344 - +0.8 96,344 - -1.5 96,374 + +1.8 96,374 + -0.0 96,374 + -2.5 96,374 + +1.0 96,374 + +1.1 96,374 + +0.2 96,374 + -0.2 96,374 + +2.4 96,374 + +1.9 96,374 + -0.5 96,375 - -2.0 96,375 - -0.5 96,375 - +0.1 96,375 - -1.5 96,375 - +1.8 96,375 - +0.3 96,375 - +0.8 96,375 - +0.0 96,375 - -0.3 96,375 - +0.8 96,375 - +1.0 96,375 - +1.0 96,375 - -0.0 96,375 - -2.0 96,375 - +0.0 96,376 + +0.2 96,376 + -2.0 96,376 + -0.2 96,376 + +0.4 96,376 + +0.8 96,376 + -0.2 96,376 + -0.2 96,376 + -0.5 96,376 + +0.0 96,376 + +2.6 96,376 + -1.8 96,377 - +1.2 96,377 - +2.0 96,377 - -0.2 96,377 - -0.5 96,377 - +0.3 96,377 - -0.2 96,377 - -1.5 96,377 - +1.5 96,377 - -1.4 96,377 - -0.8 96,377 - +0.5 96,377 - -0.5 96,377 - +0.0 96,377 - -1.2 96,377 - -1.5 96,377 - +0.0 96,377 - +0.6 96,377 - -0.5 96,377 - +0.8 96,377 - +0.1 96,377 - -1.5 96,377 - -1.5 96,377 - -0.2 96,377 - -1.3 96,377 - -3.1 96,378 + -0.2 96,378 + -0.4 96,378 + +2.4 96,378 + +0.6 96,378 + -1.2 96,378 + -0.8 96,379 - -0.5 96,379 - -0.7 96,433 + -0.4 96,477 + -1.8 96,531 - -1.1 96,531 - -1.4 96,601 - AO353_00480 0.16 +0.1 96,601 - AO353_00480 0.16 +0.2 96,612 + AO353_00480 0.18 -1.9 96,613 - AO353_00480 0.18 -0.2 96,658 - AO353_00480 0.26 -2.7 96,811 + AO353_00480 0.53 +1.3 96,812 - AO353_00480 0.53 +0.0 96,893 + AO353_00480 0.68 -0.8 96,893 + AO353_00480 0.68 +0.4 96,893 + AO353_00480 0.68 -0.2 96,894 - -0.2 96,894 - AO353_00480 0.68 +0.4 96,894 - AO353_00480 0.68 -0.9 96,894 - AO353_00480 0.68 -0.8 96,957 - AO353_00480 0.79 +2.4 96,957 - AO353_00480 0.79 +0.1
Or see this region's nucleotide sequence