Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2583

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,667,380	+				-2.2
2,667,380	+				-1.7
2,667,414	+				-2.1
2,667,422	-				-0.6
2,667,460	+				+0.9
2,667,487	+	impA	Synpcc7942_2582	0.12	-0.1
2,667,530	+	impA	Synpcc7942_2582	0.17	+0.1
2,667,579	+	impA	Synpcc7942_2582	0.23	+1.1
2,667,586	+	impA	Synpcc7942_2582	0.24	+1.9
2,667,586	+	impA	Synpcc7942_2582	0.24	-2.9
2,667,586	+	impA	Synpcc7942_2582	0.24	+0.2
2,667,589	-	impA	Synpcc7942_2582	0.24	-1.1
2,667,594	-	impA	Synpcc7942_2582	0.25	+0.5
2,667,594	-	impA	Synpcc7942_2582	0.25	+0.6
2,667,594	-	impA	Synpcc7942_2582	0.25	+1.4
2,667,647	+	impA	Synpcc7942_2582	0.31	-1.1
2,667,647	+	impA	Synpcc7942_2582	0.31	-2.7
2,667,661	+	impA	Synpcc7942_2582	0.33	-1.1
2,667,692	+				-0.1
2,667,692	+	impA	Synpcc7942_2582	0.37	+0.8
2,667,730	+	impA	Synpcc7942_2582	0.41	+0.6
2,667,733	-	impA	Synpcc7942_2582	0.42	-1.0
2,667,738	-	impA	Synpcc7942_2582	0.42	+0.8
2,667,764	+	impA	Synpcc7942_2582	0.45	+1.2
2,667,777	+				-1.7
2,667,777	+	impA	Synpcc7942_2582	0.47	+0.4
2,667,792	+	impA	Synpcc7942_2582	0.49	+0.4
2,667,792	+	impA	Synpcc7942_2582	0.49	+1.5
2,667,792	+	impA	Synpcc7942_2582	0.49	-1.2
2,667,810	+	impA	Synpcc7942_2582	0.51	-0.6
2,667,818	-	impA	Synpcc7942_2582	0.52	+0.6
2,667,831	-	impA	Synpcc7942_2582	0.54	-0.6
2,667,900	+	impA	Synpcc7942_2582	0.62	-0.9
2,667,900	+	impA	Synpcc7942_2582	0.62	-0.2
2,667,905	+	impA	Synpcc7942_2582	0.63	+0.5
2,667,906	+	impA	Synpcc7942_2582	0.63	-1.1
2,667,908	-	impA	Synpcc7942_2582	0.63	+0.3
2,667,908	-	impA	Synpcc7942_2582	0.63	+2.0
2,667,908	-	impA	Synpcc7942_2582	0.63	+0.1
2,667,908	-	impA	Synpcc7942_2582	0.63	+1.5
2,667,919	-	impA	Synpcc7942_2582	0.64	+0.7
2,667,923	+	impA	Synpcc7942_2582	0.65	+1.6
2,667,923	+	impA	Synpcc7942_2582	0.65	-0.3
2,667,944	+	impA	Synpcc7942_2582	0.67	-0.6
2,667,946	+	impA	Synpcc7942_2582	0.68	+0.8
2,667,952	+	impA	Synpcc7942_2582	0.68	+1.9
2,667,952	-	impA	Synpcc7942_2582	0.68	-1.8
2,667,960	-	impA	Synpcc7942_2582	0.69	+0.3
2,667,968	+	impA	Synpcc7942_2582	0.70	+2.4
2,667,981	+	impA	Synpcc7942_2582	0.72	+1.3
2,667,989	-	impA	Synpcc7942_2582	0.73	+2.3
2,668,004	-	impA	Synpcc7942_2582	0.75	-2.1
2,668,015	+	impA	Synpcc7942_2582	0.76	+0.1
2,668,015	+	impA	Synpcc7942_2582	0.76	-0.6
2,668,025	+	impA	Synpcc7942_2582	0.77	+0.9
2,668,042	+	impA	Synpcc7942_2582	0.79	-0.4
2,668,054	+	impA	Synpcc7942_2582	0.81	+0.1
2,668,054	+	impA	Synpcc7942_2582	0.81	+0.2
2,668,059	+	impA	Synpcc7942_2582	0.81	+0.3
2,668,059	+	impA	Synpcc7942_2582	0.81	+0.2
2,668,085	+	impA	Synpcc7942_2582	0.85	-1.5
2,668,154	+				+0.8
2,668,154	+				-0.1
2,668,154	+				+0.4
2,668,157	-				+0.9
2,668,172	-				+1.7
2,668,172	-				+0.2
2,668,187	+				+0.3
2,668,208	+				-2.4
2,668,218	-				+1.0
2,668,218	-				-2.1
2,668,236	+				-2.1
2,668,251	+				+3.7
2,668,266	-				+1.7
2,668,268	-				+0.9
2,668,291	+				+2.7
2,668,298	-				+1.5
2,668,299	-				-0.1
2,668,320	+				-0.1
2,668,329	+				+0.1
2,668,331	+				+1.6
2,668,331	+				-0.1
2,668,352	+				+1.4
2,668,352	+				-1.4
2,668,360	-				+0.2
2,668,426	-		Synpcc7942_2583	0.20	+0.4
2,668,426	-		Synpcc7942_2583	0.20	-1.6
2,668,426	-		Synpcc7942_2583	0.20	+0.1
2,668,429	+		Synpcc7942_2583	0.21	+0.6
2,668,434	+		Synpcc7942_2583	0.21	-0.2
2,668,434	+		Synpcc7942_2583	0.21	+0.7
2,668,437	-		Synpcc7942_2583	0.22	+0.3
2,668,451	+		Synpcc7942_2583	0.24	-3.4
2,668,459	-		Synpcc7942_2583	0.25	+0.9
2,668,480	+		Synpcc7942_2583	0.29	-3.2
2,668,490	+		Synpcc7942_2583	0.30	-0.2
2,668,490	+		Synpcc7942_2583	0.30	+0.3
2,668,499	+		Synpcc7942_2583	0.32	+1.9
2,668,511	+		Synpcc7942_2583	0.33	+1.4
2,668,546	+		Synpcc7942_2583	0.39	+1.1
2,668,546	+		Synpcc7942_2583	0.39	+1.5
2,668,554	-		Synpcc7942_2583	0.40	-1.4
2,668,606	-		Synpcc7942_2583	0.48	+0.6
2,668,608	+		Synpcc7942_2583	0.49	+0.8
2,668,633	-		Synpcc7942_2583	0.53	+2.0
2,668,653	-		Synpcc7942_2583	0.56	+1.3
2,668,688	+		Synpcc7942_2583	0.61	+1.5
2,668,717	-		Synpcc7942_2583	0.66	+2.3
2,668,742	+		Synpcc7942_2583	0.70	-0.1
2,668,749	+		Synpcc7942_2583	0.71	+0.7
2,668,835	-		Synpcc7942_2583	0.85	+1.7
2,668,854	+		Synpcc7942_2583	0.88	+2.2
2,668,920	-				-2.7
2,668,925	+				-0.6
2,668,939	+				-2.1
2,668,999	-				-0.3
2,669,006	-				-1.5
2,669,046	+	csgA	Synpcc7942_2584	0.14	+1.9
2,669,070	+	csgA	Synpcc7942_2584	0.17	+0.7
2,669,075	+	csgA	Synpcc7942_2584	0.18	+0.7
2,669,085	-	csgA	Synpcc7942_2584	0.19	-0.1
2,669,092	+	csgA	Synpcc7942_2584	0.20	+0.3
2,669,094	-	csgA	Synpcc7942_2584	0.20	-0.3
2,669,169	+	csgA	Synpcc7942_2584	0.30	+1.2
2,669,177	-	csgA	Synpcc7942_2584	0.31	-2.5
2,669,177	-	csgA	Synpcc7942_2584	0.31	+1.9
2,669,177	-	csgA	Synpcc7942_2584	0.31	-0.4
2,669,179	-	csgA	Synpcc7942_2584	0.31	-1.1
2,669,250	-	csgA	Synpcc7942_2584	0.40	-1.1
2,669,250	-	csgA	Synpcc7942_2584	0.40	+1.0
2,669,253	+	csgA	Synpcc7942_2584	0.41	+1.2
2,669,282	+	csgA	Synpcc7942_2584	0.45	-0.1
2,669,311	-	csgA	Synpcc7942_2584	0.48	+0.9
2,669,331	+	csgA	Synpcc7942_2584	0.51	+1.4
2,669,346	-	csgA	Synpcc7942_2584	0.53	+0.8
2,669,404	+	csgA	Synpcc7942_2584	0.61	+1.6
2,669,404	+	csgA	Synpcc7942_2584	0.61	-1.1
2,669,404	-	csgA	Synpcc7942_2584	0.61	+1.0
2,669,412	-	csgA	Synpcc7942_2584	0.62	+1.3
2,669,439	-	csgA	Synpcc7942_2584	0.65	-0.2
2,669,457	+	csgA	Synpcc7942_2584	0.67	+1.0
2,669,470	-	csgA	Synpcc7942_2584	0.69	+1.2
2,669,470	-	csgA	Synpcc7942_2584	0.69	+0.9
2,669,471	+	csgA	Synpcc7942_2584	0.69	-0.4
2,669,527	+	csgA	Synpcc7942_2584	0.77	-0.7
2,669,531	+	csgA	Synpcc7942_2584	0.77	+1.5
2,669,539	-	csgA	Synpcc7942_2584	0.78	+0.7
2,669,541	-	csgA	Synpcc7942_2584	0.78	+0.5
2,669,610	-	csgA	Synpcc7942_2584	0.87	+0.5
2,669,634	+				-1.4
2,669,636	+				-0.7
2,669,639	-				+0.6
2,669,664	+				+0.1
2,669,681	+				-0.8
2,669,737	+				-0.1
2,669,737	+				-1.1
2,669,737	+				-2.1
2,669,745	-				-0.4
2,669,745	-				+0.5
2,669,745	-				+0.9
2,669,745	-				-2.0
2,669,745	-				+0.1
2,669,756	+				+2.7
2,669,796	-		Synpcc7942_2585	0.16	+0.9
2,669,827	+		Synpcc7942_2585	0.22	+1.4
2,669,835	-		Synpcc7942_2585	0.24	+0.6
2,669,835	-		Synpcc7942_2585	0.24	+0.4