Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2555

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,632,703	+	hypB	Synpcc7942_2552	0.78	+1.0
2,632,711	-	hypB	Synpcc7942_2552	0.79	+0.7
2,632,829	+				+0.7
2,632,837	-				+1.7
2,632,837	-				+0.5
2,632,837	-				+0.4
2,632,853	+				+3.5
2,632,860	+				+0.5
2,632,868	-				+1.2
2,632,887	+				+0.3
2,632,902	-	hypA	Synpcc7942_2553	0.12	+0.4
2,632,922	+	hypA	Synpcc7942_2553	0.17	+0.9
2,632,932	-	hypA	Synpcc7942_2553	0.20	-0.6
2,632,950	-	hypA	Synpcc7942_2553	0.26	-1.1
2,632,962	+	hypA	Synpcc7942_2553	0.29	+0.1
2,632,970	+	hypA	Synpcc7942_2553	0.32	-2.1
2,632,997	-	hypA	Synpcc7942_2553	0.40	-1.1
2,633,007	-	hypA	Synpcc7942_2553	0.42	+1.6
2,633,007	-	hypA	Synpcc7942_2553	0.42	+0.5
2,633,022	+	hypA	Synpcc7942_2553	0.47	-0.8
2,633,119	-	hypA	Synpcc7942_2553	0.76	-1.1
2,633,139	+	hypA	Synpcc7942_2553	0.81	-0.1
2,633,157	-	hypA	Synpcc7942_2553	0.87	+0.3
2,633,159	+	hypA	Synpcc7942_2553	0.87	-0.5
2,633,168	+				+0.9
2,633,172	-				-1.7
2,633,172	-				+1.5
2,633,194	-				-1.9
2,633,206	+				+2.1
2,633,206	+				-1.3
2,633,206	-				-1.7
2,633,260	+	hoxW	Synpcc7942_2554	0.15	+2.8
2,633,276	-	hoxW	Synpcc7942_2554	0.19	+0.9
2,633,322	+	hoxW	Synpcc7942_2554	0.29	-0.1
2,633,345	-	hoxW	Synpcc7942_2554	0.34	-0.4
2,633,357	+	hoxW	Synpcc7942_2554	0.37	+0.4
2,633,360	+	hoxW	Synpcc7942_2554	0.37	+1.7
2,633,374	+	hoxW	Synpcc7942_2554	0.40	-0.1
2,633,382	-	hoxW	Synpcc7942_2554	0.42	+0.1
2,633,383	+	hoxW	Synpcc7942_2554	0.42	+1.6
2,633,388	+	hoxW	Synpcc7942_2554	0.43	-1.1
2,633,391	-	hoxW	Synpcc7942_2554	0.44	+0.4
2,633,393	+	hoxW	Synpcc7942_2554	0.44	+0.1
2,633,393	+	hoxW	Synpcc7942_2554	0.44	-0.0
2,633,393	+	hoxW	Synpcc7942_2554	0.44	-0.4
2,633,395	+				+1.3
2,633,401	-	hoxW	Synpcc7942_2554	0.46	+2.2
2,633,497	-	hoxW	Synpcc7942_2554	0.67	-1.7
2,633,506	-	hoxW	Synpcc7942_2554	0.69	+0.7
2,633,602	+				+1.5
2,633,619	+				-2.1
2,633,627	-				+0.6
2,633,628	-				+1.6
2,633,635	+				-1.8
2,633,641	-				+1.7
2,633,653	+				+0.6
2,633,654	+				-2.4
2,633,661	-				-2.2
2,633,688	+				+0.3
2,633,688	+				+1.0
2,633,733	+				-0.1
2,633,742	-				-1.9
2,633,747	-				+0.6
2,633,760	+				-0.1
2,633,760	+				-0.1
2,633,803	+	hoxH	Synpcc7942_2555	0.10	-1.5
2,633,803	+	hoxH	Synpcc7942_2555	0.10	+2.3
2,633,811	-	hoxH	Synpcc7942_2555	0.11	-0.1
2,633,811	-	hoxH	Synpcc7942_2555	0.11	-1.7
2,633,811	-	hoxH	Synpcc7942_2555	0.11	+0.6
2,633,813	+	hoxH	Synpcc7942_2555	0.11	+0.8
2,633,821	-	hoxH	Synpcc7942_2555	0.12	-3.4
2,633,824	+	hoxH	Synpcc7942_2555	0.12	-0.1
2,633,833	-	hoxH	Synpcc7942_2555	0.12	-0.1
2,633,833	-	hoxH	Synpcc7942_2555	0.12	+0.5
2,633,833	-	hoxH	Synpcc7942_2555	0.12	+0.5
2,633,852	+	hoxH	Synpcc7942_2555	0.14	+0.7
2,633,858	-	hoxH	Synpcc7942_2555	0.14	+2.7
2,633,880	-	hoxH	Synpcc7942_2555	0.16	-1.1
2,633,885	+	hoxH	Synpcc7942_2555	0.16	+0.9
2,633,885	+	hoxH	Synpcc7942_2555	0.16	+2.4
2,633,958	-	hoxH	Synpcc7942_2555	0.21	+1.1
2,633,970	+	hoxH	Synpcc7942_2555	0.22	-1.1
2,633,978	-	hoxH	Synpcc7942_2555	0.23	+0.4
2,633,987	+	hoxH	Synpcc7942_2555	0.23	-0.9
2,633,993	+	hoxH	Synpcc7942_2555	0.24	+2.5
2,634,007	-	hoxH	Synpcc7942_2555	0.25	-0.1
2,634,027	+	hoxH	Synpcc7942_2555	0.26	-0.5
2,634,042	-	hoxH	Synpcc7942_2555	0.27	+2.5
2,634,055	+	hoxH	Synpcc7942_2555	0.28	-0.2
2,634,065	-	hoxH	Synpcc7942_2555	0.29	-1.7
2,634,081	-	hoxH	Synpcc7942_2555	0.30	+0.6
2,634,102	-	hoxH	Synpcc7942_2555	0.31	+3.1
2,634,117	-	hoxH	Synpcc7942_2555	0.32	+1.9
2,634,141	+	hoxH	Synpcc7942_2555	0.34	-2.7
2,634,149	-	hoxH	Synpcc7942_2555	0.34	-2.1
2,634,155	+	hoxH	Synpcc7942_2555	0.35	-1.4
2,634,163	-	hoxH	Synpcc7942_2555	0.35	+1.1
2,634,167	+	hoxH	Synpcc7942_2555	0.36	+2.2
2,634,201	+	hoxH	Synpcc7942_2555	0.38	-0.1
2,634,212	+	hoxH	Synpcc7942_2555	0.39	+0.7
2,634,220	-	hoxH	Synpcc7942_2555	0.39	+0.9
2,634,225	+	hoxH	Synpcc7942_2555	0.40	+0.5
2,634,225	+	hoxH	Synpcc7942_2555	0.40	-2.1
2,634,225	+	hoxH	Synpcc7942_2555	0.40	-1.1
2,634,228	-	hoxH	Synpcc7942_2555	0.40	+0.3
2,634,235	+	hoxH	Synpcc7942_2555	0.40	-0.1
2,634,236	+	hoxH	Synpcc7942_2555	0.41	-0.7
2,634,238	-	hoxH	Synpcc7942_2555	0.41	-1.7
2,634,242	+	hoxH	Synpcc7942_2555	0.41	-1.7
2,634,244	-	hoxH	Synpcc7942_2555	0.41	+0.8
2,634,250	+	hoxH	Synpcc7942_2555	0.42	-2.1
2,634,276	-	hoxH	Synpcc7942_2555	0.43	+1.8
2,634,307	+	hoxH	Synpcc7942_2555	0.45	-1.7
2,634,307	+	hoxH	Synpcc7942_2555	0.45	+1.5
2,634,322	-	hoxH	Synpcc7942_2555	0.47	-0.1
2,634,337	-	hoxH	Synpcc7942_2555	0.48	+1.0
2,634,345	+	hoxH	Synpcc7942_2555	0.48	+1.5
2,634,366	-	hoxH	Synpcc7942_2555	0.50	-0.4
2,634,373	+	hoxH	Synpcc7942_2555	0.50	-1.1
2,634,376	+	hoxH	Synpcc7942_2555	0.50	+0.1
2,634,464	-	hoxH	Synpcc7942_2555	0.56	+1.1
2,634,493	+	hoxH	Synpcc7942_2555	0.58	-2.4
2,634,493	+	hoxH	Synpcc7942_2555	0.58	+2.0
2,634,496	-	hoxH	Synpcc7942_2555	0.59	+0.6
2,634,496	-	hoxH	Synpcc7942_2555	0.59	+0.4
2,634,503	+	hoxH	Synpcc7942_2555	0.59	-2.7
2,634,511	-	hoxH	Synpcc7942_2555	0.60	+0.4
2,634,513	-	hoxH	Synpcc7942_2555	0.60	-1.4
2,634,572	-	hoxH	Synpcc7942_2555	0.64	-4.0
2,634,574	+	hoxH	Synpcc7942_2555	0.64	-0.7
2,634,574	+	hoxH	Synpcc7942_2555	0.64	-0.2
2,634,582	-	hoxH	Synpcc7942_2555	0.65	+0.1
2,634,617	-	hoxH	Synpcc7942_2555	0.67	+0.4
2,634,632	+	hoxH	Synpcc7942_2555	0.68	+1.8
2,634,636	-	hoxH	Synpcc7942_2555	0.68	+2.4
2,634,640	-	hoxH	Synpcc7942_2555	0.69	-1.1
2,634,648	+	hoxH	Synpcc7942_2555	0.69	-0.2
2,634,699	+	hoxH	Synpcc7942_2555	0.73	+1.1
2,634,766	-				+0.7
2,634,775	+	hoxH	Synpcc7942_2555	0.78	-0.7
2,634,778	-	hoxH	Synpcc7942_2555	0.78	+2.1
2,634,780	+	hoxH	Synpcc7942_2555	0.79	+1.9
2,634,832	+	hoxH	Synpcc7942_2555	0.82	+0.4
2,634,835	-	hoxH	Synpcc7942_2555	0.82	+0.2
2,634,876	+	hoxH	Synpcc7942_2555	0.85	+1.6
2,634,884	-	hoxH	Synpcc7942_2555	0.86	-1.7
2,634,907	-	hoxH	Synpcc7942_2555	0.87	-0.8
2,634,917	+	hoxH	Synpcc7942_2555	0.88	+1.3
2,634,947	+				+0.4
2,634,955	-				-3.1
2,634,978	-				-2.1
2,634,980	+				+0.7
2,634,993	-				+0.9
2,635,003	-				-0.4
2,635,006	+				-1.1
2,635,014	-				-2.1
2,635,083	+				+0.8
2,635,083	+				+0.8
2,635,091	-				+0.7
2,635,114	+				-1.1
2,635,152	-	hoxY	Synpcc7942_2556	0.10	-0.1
2,635,195	+	hoxY	Synpcc7942_2556	0.18	+0.3
2,635,195	+	hoxY	Synpcc7942_2556	0.18	-0.8
2,635,244	-	hoxY	Synpcc7942_2556	0.27	-0.4
2,635,303	-	hoxY	Synpcc7942_2556	0.37	+1.1
2,635,305	+	hoxY	Synpcc7942_2556	0.38	-1.1
2,635,305	+	hoxY	Synpcc7942_2556	0.38	+1.2
2,635,313	-	hoxY	Synpcc7942_2556	0.39	+2.1
2,635,313	-	hoxY	Synpcc7942_2556	0.39	-0.6
2,635,313	-	hoxY	Synpcc7942_2556	0.39	-0.1
2,635,313	-	hoxY	Synpcc7942_2556	0.39	+1.2
2,635,313	-	hoxY	Synpcc7942_2556	0.39	+0.9
2,635,313	-	hoxY	Synpcc7942_2556	0.39	+0.6
2,635,313	-	hoxY	Synpcc7942_2556	0.39	+1.6
2,635,313	-	hoxY	Synpcc7942_2556	0.39	+0.1
2,635,313	-	hoxY	Synpcc7942_2556	0.39	-1.9
2,635,318	-	hoxY	Synpcc7942_2556	0.40	-0.2
2,635,318	-	hoxY	Synpcc7942_2556	0.40	+1.0
2,635,321	+	hoxY	Synpcc7942_2556	0.41	-2.9
2,635,326	+	hoxY	Synpcc7942_2556	0.41	-2.1
2,635,329	-	hoxY	Synpcc7942_2556	0.42	-0.1
2,635,329	-	hoxY	Synpcc7942_2556	0.42	-3.1
2,635,354	-	hoxY	Synpcc7942_2556	0.46	-0.1
2,635,365	+	hoxY	Synpcc7942_2556	0.48	-0.2
2,635,395	+	hoxY	Synpcc7942_2556	0.54	-0.4
2,635,441	-	hoxY	Synpcc7942_2556	0.62	+0.3
2,635,441	-	hoxY	Synpcc7942_2556	0.62	+0.9
2,635,441	-	hoxY	Synpcc7942_2556	0.62	-0.2
2,635,451	-	hoxY	Synpcc7942_2556	0.64	-2.4
2,635,480	-	hoxY	Synpcc7942_2556	0.69	-0.1
2,635,488	+	hoxY	Synpcc7942_2556	0.71	+1.9
2,635,494	-	hoxY	Synpcc7942_2556	0.72	-0.2
2,635,504	-	hoxY	Synpcc7942_2556	0.74	-1.4
2,635,505	-	hoxY	Synpcc7942_2556	0.74	-0.1
2,635,532	-	hoxY	Synpcc7942_2556	0.79	-0.5
2,635,537	-	hoxY	Synpcc7942_2556	0.79	+0.6
2,635,549	-	hoxY	Synpcc7942_2556	0.82	+0.2
2,635,643	-				-1.2
2,635,658	+				+1.7
2,635,679	-				+0.4
2,635,734	-	hoxU	Synpcc7942_2557	0.13	-0.7
2,635,752	+	hoxU	Synpcc7942_2557	0.16	-1.4
2,635,782	+	hoxU	Synpcc7942_2557	0.20	+1.4
2,635,790	-	hoxU	Synpcc7942_2557	0.21	-0.8
2,635,795	+	hoxU	Synpcc7942_2557	0.22	-3.2
2,635,795	+	hoxU	Synpcc7942_2557	0.22	+0.7
2,635,795	+	hoxU	Synpcc7942_2557	0.22	+0.4
2,635,803	-	hoxU	Synpcc7942_2557	0.23	-0.5
2,635,803	-	hoxU	Synpcc7942_2557	0.23	+2.1
2,635,803	-	hoxU	Synpcc7942_2557	0.23	-2.2
2,635,803	-	hoxU	Synpcc7942_2557	0.23	+1.3
2,635,852	+	hoxU	Synpcc7942_2557	0.30	-1.1
2,635,860	-	hoxU	Synpcc7942_2557	0.31	+0.7
2,635,860	-	hoxU	Synpcc7942_2557	0.31	-0.7
2,635,860	-	hoxU	Synpcc7942_2557	0.31	+0.7
2,635,860	-	hoxU	Synpcc7942_2557	0.31	+1.3
2,635,867	+	hoxU	Synpcc7942_2557	0.32	+0.3
2,635,886	+	hoxU	Synpcc7942_2557	0.35	+0.9
2,635,886	+	hoxU	Synpcc7942_2557	0.35	-0.1
2,635,894	-	hoxU	Synpcc7942_2557	0.36	+1.3
2,635,894	-	hoxU	Synpcc7942_2557	0.36	-0.1
2,635,936	-	hoxU	Synpcc7942_2557	0.42	-0.1
2,635,972	+	hoxU	Synpcc7942_2557	0.47	-1.1
2,635,973	+	hoxU	Synpcc7942_2557	0.47	-0.1
2,635,973	+				-1.1
2,635,978	+	hoxU	Synpcc7942_2557	0.47	-2.1
2,635,980	-	hoxU	Synpcc7942_2557	0.48	+1.6
2,635,986	+	hoxU	Synpcc7942_2557	0.49	-2.7
2,635,986	-	hoxU	Synpcc7942_2557	0.49	+1.1
2,636,016	+	hoxU	Synpcc7942_2557	0.53	+1.3
2,636,039	+	hoxU	Synpcc7942_2557	0.56	-2.1