Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2528

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,608,829	-				-2.8
2,608,893	+				+0.5
2,608,893	+				+0.4
2,608,900	+				-2.4
2,608,901	-				+0.6
2,608,901	-				-0.1
2,608,901	-				-2.7
2,608,951	+				+0.1
2,609,018	-		Synpcc7942_2527	0.17	+1.3
2,609,028	+		Synpcc7942_2527	0.18	+0.2
2,609,036	-		Synpcc7942_2527	0.19	+1.0
2,609,058	-		Synpcc7942_2527	0.22	+0.3
2,609,079	+		Synpcc7942_2527	0.24	-0.3
2,609,084	+		Synpcc7942_2527	0.25	+0.7
2,609,087	-		Synpcc7942_2527	0.25	-0.4
2,609,092	-		Synpcc7942_2527	0.26	-0.6
2,609,092	-		Synpcc7942_2527	0.26	-0.5
2,609,168	+		Synpcc7942_2527	0.35	-0.1
2,609,176	-		Synpcc7942_2527	0.36	-1.1
2,609,176	-		Synpcc7942_2527	0.36	-0.1
2,609,177	-		Synpcc7942_2527	0.36	-2.4
2,609,183	-		Synpcc7942_2527	0.37	-3.0
2,609,198	+		Synpcc7942_2527	0.38	+0.1
2,609,212	-		Synpcc7942_2527	0.40	-1.5
2,609,234	-		Synpcc7942_2527	0.43	-0.9
2,609,265	+		Synpcc7942_2527	0.46	-2.1
2,609,273	-		Synpcc7942_2527	0.47	+1.5
2,609,299	+		Synpcc7942_2527	0.50	+2.2
2,609,397	-		Synpcc7942_2527	0.62	-1.2
2,609,398	+		Synpcc7942_2527	0.62	-0.2
2,609,453	-		Synpcc7942_2527	0.69	+1.6
2,609,457	+		Synpcc7942_2527	0.69	-2.1
2,609,482	+		Synpcc7942_2527	0.72	-0.5
2,609,501	+		Synpcc7942_2527	0.74	-0.1
2,609,501	+		Synpcc7942_2527	0.74	+1.4
2,609,509	-		Synpcc7942_2527	0.75	+0.3
2,609,527	-		Synpcc7942_2527	0.77	+1.4
2,609,537	-		Synpcc7942_2527	0.79	-0.7
2,609,553	-		Synpcc7942_2527	0.80	+1.7
2,609,567	+		Synpcc7942_2527	0.82	+0.2
2,609,572	+		Synpcc7942_2527	0.83	+0.2
2,609,589	+		Synpcc7942_2527	0.85	-0.1
2,609,590	+		Synpcc7942_2527	0.85	-0.7
2,609,590	-		Synpcc7942_2527	0.85	+0.9
2,609,628	+		Synpcc7942_2527	0.89	+0.6
2,609,628	+		Synpcc7942_2527	0.89	-0.1
2,609,712	-				+0.9
2,609,731	+				+0.3
2,609,736	+				+1.2
2,609,747	-				-1.1
2,609,781	-				+2.0
2,609,783	+				+1.7
2,609,783	+				+1.8
2,609,783	+				-0.8
2,609,785	+				+1.1
2,609,791	-				+0.5
2,609,791	-				-0.8
2,609,823	+		Synpcc7942_2528	0.12	+1.3
2,609,830	-		Synpcc7942_2528	0.13	+1.3
2,609,830	-		Synpcc7942_2528	0.13	+0.0
2,609,889	+		Synpcc7942_2528	0.22	+0.8
2,609,910	-		Synpcc7942_2528	0.25	+0.5
2,609,912	-		Synpcc7942_2528	0.25	+1.2
2,609,968	+		Synpcc7942_2528	0.33	-1.1
2,609,971	-		Synpcc7942_2528	0.33	+1.0
2,609,981	+		Synpcc7942_2528	0.35	-0.6
2,610,011	-		Synpcc7942_2528	0.39	+0.3
2,610,017	+		Synpcc7942_2528	0.40	+1.3
2,610,036	-		Synpcc7942_2528	0.43	+1.3
2,610,091	-		Synpcc7942_2528	0.51	+1.7
2,610,091	-		Synpcc7942_2528	0.51	-2.1
2,610,118	-		Synpcc7942_2528	0.55	-1.5
2,610,129	+		Synpcc7942_2528	0.56	+2.0
2,610,136	-		Synpcc7942_2528	0.57	+0.5
2,610,156	-		Synpcc7942_2528	0.60	+0.7
2,610,158	+		Synpcc7942_2528	0.61	-0.1
2,610,185	+		Synpcc7942_2528	0.65	-0.2
2,610,187	-		Synpcc7942_2528	0.65	-1.5
2,610,262	-		Synpcc7942_2528	0.76	+2.0
2,610,323	+		Synpcc7942_2528	0.85	-0.9
2,610,336	-		Synpcc7942_2528	0.87	+1.0
2,610,386	-				-1.2
2,610,406	-				+0.3
2,610,423	-				+1.5
2,610,457	-				+0.9
2,610,475	+				+0.9
2,610,489	+				-1.7
2,610,496	+				+1.0
2,610,508	+				+3.7
2,610,508	+				+0.4
2,610,595	-				-2.5
2,610,648	-				-1.1
2,610,651	+				+0.3
2,610,659	+				-0.7
2,610,701	+				+2.3
2,610,726	+				-1.3
2,610,729	-				+1.9
2,610,733	-				+0.1
2,610,733	-				+1.3
2,610,877	+	gifB	Synpcc7942_2529	0.44	-0.1
2,610,942	+	gifB	Synpcc7942_2529	0.66	+1.3
2,610,949	-	gifB	Synpcc7942_2529	0.69	-0.5
2,610,969	-	gifB	Synpcc7942_2529	0.76	-0.0
2,610,977	+	gifB	Synpcc7942_2529	0.79	+1.3
2,610,985	-	gifB	Synpcc7942_2529	0.81	+0.9
2,611,018	-				+0.4
2,611,036	+				+0.1
2,611,039	-				+0.2
2,611,048	+				-1.1
2,611,067	+				+1.3
2,611,105	-				-0.8
2,611,147	-				-2.1
2,611,202	+				+1.7
2,611,244	-				-1.7