Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2448

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,523,961	+				+1.3
2,524,050	-				-1.1
2,524,085	-				+0.4
2,524,085	-				-1.2
2,524,102	-				-1.1
2,524,151	-		Synpcc7942_2447	0.26	-1.1
2,524,214	+		Synpcc7942_2447	0.54	+0.5
2,524,214	+		Synpcc7942_2447	0.54	+0.5
2,524,214	+		Synpcc7942_2447	0.54	+0.6
2,524,214	+		Synpcc7942_2447	0.54	-2.3
2,524,214	+		Synpcc7942_2447	0.54	+0.6
2,524,214	+		Synpcc7942_2447	0.54	-0.5
2,524,214	+		Synpcc7942_2447	0.54	+0.4
2,524,214	+		Synpcc7942_2447	0.54	+0.1
2,524,214	+		Synpcc7942_2447	0.54	+0.3
2,524,222	-		Synpcc7942_2447	0.58	-0.2
2,524,222	-		Synpcc7942_2447	0.58	+0.5
2,524,222	-		Synpcc7942_2447	0.58	+0.9
2,524,222	-		Synpcc7942_2447	0.58	+3.3
2,524,222	-		Synpcc7942_2447	0.58	+1.3
2,524,222	-		Synpcc7942_2447	0.58	+1.9
2,524,222	-		Synpcc7942_2447	0.58	+1.7
2,524,232	+		Synpcc7942_2447	0.62	-0.1
2,524,232	-		Synpcc7942_2447	0.62	-2.0
2,524,240	-		Synpcc7942_2447	0.66	-0.5
2,524,254	-		Synpcc7942_2447	0.72	+0.9
2,524,294	+				-0.8
2,524,310	+				+1.3
2,524,310	+				+1.1
2,524,318	-				-2.5
2,524,412	+				+0.0
2,524,434	-				+1.2
2,524,436	+				+1.0
2,524,444	-				+1.2
2,524,469	+				-1.7
2,524,515	+				+0.9
2,524,531	+				-0.5
2,524,541	+				-0.3
2,524,580	-				-1.3
2,524,645	-	hflX	Synpcc7942_2448	0.11	+1.0
2,524,659	+	hflX	Synpcc7942_2448	0.12	+1.2
2,524,659	+	hflX	Synpcc7942_2448	0.12	+0.2
2,524,660	+	hflX	Synpcc7942_2448	0.12	-3.8
2,524,667	-				-1.1
2,524,669	+	hflX	Synpcc7942_2448	0.13	+0.4
2,524,669	+	hflX	Synpcc7942_2448	0.13	+0.3
2,524,669	+	hflX	Synpcc7942_2448	0.13	-1.1
2,524,669	+	hflX	Synpcc7942_2448	0.13	+1.9
2,524,677	-	hflX	Synpcc7942_2448	0.13	+0.5
2,524,677	-	hflX	Synpcc7942_2448	0.13	+1.6
2,524,677	-				+2.3
2,524,677	-	hflX	Synpcc7942_2448	0.13	-2.2
2,524,677	-	hflX	Synpcc7942_2448	0.13	-0.7
2,524,677	-	hflX	Synpcc7942_2448	0.13	+1.8
2,524,677	-	hflX	Synpcc7942_2448	0.13	+0.8
2,524,683	-	hflX	Synpcc7942_2448	0.14	+0.2
2,524,687	+	hflX	Synpcc7942_2448	0.14	-0.1
2,524,687	+	hflX	Synpcc7942_2448	0.14	-2.0
2,524,700	+	hflX	Synpcc7942_2448	0.15	-1.7
2,524,708	-	hflX	Synpcc7942_2448	0.15	+1.1
2,524,710	+	hflX	Synpcc7942_2448	0.15	+1.2
2,524,710	+	hflX	Synpcc7942_2448	0.15	+1.3
2,524,710	+	hflX	Synpcc7942_2448	0.15	-0.1
2,524,720	+	hflX	Synpcc7942_2448	0.16	+1.7
2,524,759	+	hflX	Synpcc7942_2448	0.18	+1.2
2,524,800	-	hflX	Synpcc7942_2448	0.21	+1.8
2,524,812	+	hflX	Synpcc7942_2448	0.22	+0.7
2,524,817	+	hflX	Synpcc7942_2448	0.22	+2.1
2,524,817	+	hflX	Synpcc7942_2448	0.22	+2.3
2,524,820	-	hflX	Synpcc7942_2448	0.22	-1.4
2,524,848	+	hflX	Synpcc7942_2448	0.24	-0.7
2,524,853	+	hflX	Synpcc7942_2448	0.24	+0.3
2,524,855	+	hflX	Synpcc7942_2448	0.24	+0.7
2,524,861	-	hflX	Synpcc7942_2448	0.25	-2.4
2,524,861	-	hflX	Synpcc7942_2448	0.25	+1.5
2,524,888	+	hflX	Synpcc7942_2448	0.26	-1.1
2,524,904	-	hflX	Synpcc7942_2448	0.27	+0.3
2,524,952	+	hflX	Synpcc7942_2448	0.30	+1.5
2,524,964	-	hflX	Synpcc7942_2448	0.31	+1.6
2,524,976	-	hflX	Synpcc7942_2448	0.32	+1.5
2,524,981	+	hflX	Synpcc7942_2448	0.32	+1.0
2,525,022	-	hflX	Synpcc7942_2448	0.35	-2.9
2,525,040	+	hflX	Synpcc7942_2448	0.36	+2.3
2,525,071	-	hflX	Synpcc7942_2448	0.38	-0.1
2,525,076	-	hflX	Synpcc7942_2448	0.38	+1.7
2,525,088	+	hflX	Synpcc7942_2448	0.39	-0.4
2,525,203	-	hflX	Synpcc7942_2448	0.46	+0.6
2,525,213	+	hflX	Synpcc7942_2448	0.47	+0.3
2,525,333	+	hflX	Synpcc7942_2448	0.54	+0.2
2,525,336	-	hflX	Synpcc7942_2448	0.54	+1.3
2,525,341	-	hflX	Synpcc7942_2448	0.55	-3.4
2,525,341	-	hflX	Synpcc7942_2448	0.55	+1.4
2,525,367	+	hflX	Synpcc7942_2448	0.56	+0.9
2,525,382	+	hflX	Synpcc7942_2448	0.57	-0.1
2,525,403	+	hflX	Synpcc7942_2448	0.58	+0.5
2,525,433	-	hflX	Synpcc7942_2448	0.60	+0.4
2,525,435	+	hflX	Synpcc7942_2448	0.60	+0.3
2,525,518	+	hflX	Synpcc7942_2448	0.66	+0.6
2,525,549	+	hflX	Synpcc7942_2448	0.67	-0.2
2,525,587	+	hflX	Synpcc7942_2448	0.70	+1.3
2,525,595	-	hflX	Synpcc7942_2448	0.70	+2.5
2,525,597	+	hflX	Synpcc7942_2448	0.70	+0.4
2,525,605	-	hflX	Synpcc7942_2448	0.71	-0.1
2,525,605	-	hflX	Synpcc7942_2448	0.71	+0.5
2,525,605	-	hflX	Synpcc7942_2448	0.71	-0.2
2,525,605	-	hflX	Synpcc7942_2448	0.71	+2.0
2,525,614	+	hflX	Synpcc7942_2448	0.72	+1.1
2,525,622	-	hflX	Synpcc7942_2448	0.72	+0.1
2,525,650	+	hflX	Synpcc7942_2448	0.74	+0.2
2,525,650	+	hflX	Synpcc7942_2448	0.74	+1.1
2,525,658	-	hflX	Synpcc7942_2448	0.74	-1.7
2,525,658	-	hflX	Synpcc7942_2448	0.74	-0.1
2,525,684	+	hflX	Synpcc7942_2448	0.76	-1.1
2,525,686	-	hflX	Synpcc7942_2448	0.76	+1.3
2,525,695	+	hflX	Synpcc7942_2448	0.77	+1.1
2,525,708	-	hflX	Synpcc7942_2448	0.77	+0.2
2,525,708	-	hflX	Synpcc7942_2448	0.77	-0.2
2,525,709	-	hflX	Synpcc7942_2448	0.77	-2.1
2,525,797	+	hflX	Synpcc7942_2448	0.83	+0.4
2,525,813	+	hflX	Synpcc7942_2448	0.84	+1.2
2,525,821	+	hflX	Synpcc7942_2448	0.84	+0.2
2,525,839	-	hflX	Synpcc7942_2448	0.86	+2.2
2,525,850	+	hflX	Synpcc7942_2448	0.86	-1.7
2,525,858	-	hflX	Synpcc7942_2448	0.87	-0.1
2,525,865	+	hflX	Synpcc7942_2448	0.87	+0.3
2,525,865	+	hflX	Synpcc7942_2448	0.87	+1.0
2,525,873	-	hflX	Synpcc7942_2448	0.88	-0.1
2,525,896	+	hflX	Synpcc7942_2448	0.89	+1.6
2,526,008	-				-0.3
2,526,022	-				+0.9
2,526,030	-				-2.4
2,526,034	+				+0.8
2,526,072	-				+2.3
2,526,804	+				+0.3
2,526,812	-				+0.0
2,526,814	+				-1.2
2,526,814	+				-0.8
2,526,814	+				+0.8
2,526,817	+				+0.4
2,526,872	+				-0.7
2,526,955	+				-0.3
2,526,963	-				-1.4
2,526,974	+				+0.9
2,526,974	+				-0.7
2,526,974	+				-2.1
2,526,987	-				-0.1
2,527,015	+				-0.1
2,527,015	+				+0.9
2,527,015	+				-0.4
2,527,018	-				-1.7
2,527,018	-				-1.0
2,527,023	-				+0.1
2,527,023	-				-2.1
2,527,023	-				-0.5
2,527,025	+				-1.3
2,527,025	+				+0.4
2,527,057	+				-0.7
2,527,057	+				-2.4
2,527,059	-				-0.1
2,527,065	-				-2.4