Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2432

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,505,151	-		Synpcc7942_2431	0.79	+1.2
2,505,158	+		Synpcc7942_2431	0.79	+0.2
2,505,160	-		Synpcc7942_2431	0.79	-0.5
2,505,161	-		Synpcc7942_2431	0.79	+0.9
2,505,161	-		Synpcc7942_2431	0.79	+0.3
2,505,166	-				-0.1
2,505,171	-		Synpcc7942_2431	0.79	+1.7
2,505,171	-		Synpcc7942_2431	0.79	+1.5
2,505,181	+		Synpcc7942_2431	0.80	-0.6
2,505,201	-		Synpcc7942_2431	0.80	-3.1
2,505,219	+		Synpcc7942_2431	0.81	+0.1
2,505,219	+		Synpcc7942_2431	0.81	+0.7
2,505,222	-		Synpcc7942_2431	0.81	+2.7
2,505,224	+		Synpcc7942_2431	0.81	+1.5
2,505,224	+		Synpcc7942_2431	0.81	+0.6
2,505,224	+		Synpcc7942_2431	0.81	+2.0
2,505,232	-		Synpcc7942_2431	0.81	+3.9
2,505,232	-		Synpcc7942_2431	0.81	-0.3
2,505,232	-		Synpcc7942_2431	0.81	-2.7
2,505,232	-		Synpcc7942_2431	0.81	-1.4
2,505,232	-		Synpcc7942_2431	0.81	+0.2
2,505,244	-		Synpcc7942_2431	0.81	+1.3
2,505,244	-		Synpcc7942_2431	0.81	+0.9
2,505,297	-		Synpcc7942_2431	0.83	+0.1
2,505,297	-		Synpcc7942_2431	0.83	-0.3
2,505,314	-		Synpcc7942_2431	0.83	+1.3
2,505,314	-		Synpcc7942_2431	0.83	-0.1
2,505,393	+		Synpcc7942_2431	0.85	+1.4
2,505,399	-		Synpcc7942_2431	0.85	+1.3
2,505,406	+		Synpcc7942_2431	0.86	+0.9
2,505,412	+		Synpcc7942_2431	0.86	+0.2
2,505,412	+		Synpcc7942_2431	0.86	-0.3
2,505,412	+		Synpcc7942_2431	0.86	+1.2
2,505,412	+		Synpcc7942_2431	0.86	+0.9
2,505,412	+		Synpcc7942_2431	0.86	-0.3
2,505,412	+		Synpcc7942_2431	0.86	-0.1
2,505,412	+		Synpcc7942_2431	0.86	+0.3
2,505,412	+		Synpcc7942_2431	0.86	-1.1
2,505,412	+		Synpcc7942_2431	0.86	+0.4
2,505,414	-		Synpcc7942_2431	0.86	-0.1
2,505,414	-		Synpcc7942_2431	0.86	-0.3
2,505,414	-		Synpcc7942_2431	0.86	-0.2
2,505,420	-		Synpcc7942_2431	0.86	-2.4
2,505,420	-		Synpcc7942_2431	0.86	+0.1
2,505,440	+		Synpcc7942_2431	0.86	+1.7
2,505,448	-		Synpcc7942_2431	0.87	+0.7
2,505,458	-		Synpcc7942_2431	0.87	-0.6
2,505,458	-		Synpcc7942_2431	0.87	+1.6
2,505,464	+		Synpcc7942_2431	0.87	+2.9
2,505,465	+		Synpcc7942_2431	0.87	-0.1
2,505,478	-		Synpcc7942_2431	0.87	+1.2
2,505,486	-		Synpcc7942_2431	0.88	-0.4
2,505,494	-		Synpcc7942_2431	0.88	-1.3
2,505,531	-		Synpcc7942_2431	0.89	+1.3
2,505,540	-		Synpcc7942_2431	0.89	+0.8
2,505,546	+		Synpcc7942_2431	0.89	+0.9
2,505,554	-		Synpcc7942_2431	0.89	-2.1
2,505,561	+		Synpcc7942_2431	0.90	-0.7
2,505,561	+		Synpcc7942_2431	0.90	-0.1
2,505,567	-		Synpcc7942_2431	0.90	-2.4
2,505,569	-		Synpcc7942_2431	0.90	+2.1
2,505,569	-		Synpcc7942_2431	0.90	-0.1
2,505,574	+		Synpcc7942_2431	0.90	-2.4
2,505,574	+		Synpcc7942_2431	0.90	-1.4
2,505,574	+		Synpcc7942_2431	0.90	-1.7
2,505,581	+				+2.3
2,505,581	+				-0.5
2,505,582	-				-2.1
2,505,588	-				-1.7
2,505,589	-				+0.1
2,505,636	-				-0.1
2,505,643	-				-1.1
2,505,691	-				+1.4
2,505,702	+				-0.9
2,505,709	+				+0.1
2,505,709	+				+1.9
2,505,725	+				-1.4
2,505,727	-				+0.4
2,505,727	-				+0.1
2,505,780	-				+0.6
2,505,822	+				+0.4
2,505,824	+				+0.5
2,505,827	-				-0.3
2,505,830	-				+1.3
2,505,853	-				-0.1
2,505,864	-				+0.2
2,505,889	+				-3.4
2,505,889	+				+1.2
2,505,889	+				+0.8
2,505,897	-				-1.3
2,505,897	-				+1.4
2,505,897	-				+1.1
2,505,899	+				-1.9
2,505,942	-				-1.7
2,505,947	+				+0.6
2,505,977	+				+0.1
2,505,980	-				+0.5
2,506,004	-				+1.0
2,506,017	+				+0.4
2,506,099	+				-0.1
2,506,102	-				-0.1
2,506,111	-				-1.2
2,506,133	-				-0.1
2,506,166	+				-0.1
2,506,171	+				-3.1
2,506,207	+		Synpcc7942_2432	0.14	+3.9
2,506,211	+		Synpcc7942_2432	0.15	-0.1
2,506,217	+		Synpcc7942_2432	0.16	-0.9
2,506,244	+		Synpcc7942_2432	0.20	+0.2
2,506,259	-		Synpcc7942_2432	0.23	+0.3
2,506,305	-		Synpcc7942_2432	0.30	-1.7
2,506,318	+		Synpcc7942_2432	0.32	+2.3
2,506,318	-		Synpcc7942_2432	0.32	+1.9
2,506,320	-		Synpcc7942_2432	0.33	+0.9
2,506,333	+		Synpcc7942_2432	0.35	-1.1
2,506,356	-		Synpcc7942_2432	0.39	+0.9
2,506,368	-		Synpcc7942_2432	0.41	-1.2
2,506,381	+		Synpcc7942_2432	0.43	-1.7
2,506,381	+		Synpcc7942_2432	0.43	-2.4
2,506,503	+		Synpcc7942_2432	0.63	+1.7
2,506,516	+		Synpcc7942_2432	0.65	+3.0
2,506,526	+		Synpcc7942_2432	0.67	+0.3
2,506,527	-		Synpcc7942_2432	0.67	+1.0
2,506,539	-		Synpcc7942_2432	0.69	+0.6
2,506,560	+		Synpcc7942_2432	0.72	+0.7
2,506,568	-		Synpcc7942_2432	0.73	+0.8
2,506,573	+		Synpcc7942_2432	0.74	+2.2
2,506,582	+		Synpcc7942_2432	0.76	-2.1
2,506,583	+		Synpcc7942_2432	0.76	-0.1
2,506,583	+		Synpcc7942_2432	0.76	+1.1
2,506,590	-		Synpcc7942_2432	0.77	+2.8
2,506,611	+		Synpcc7942_2432	0.80	+3.3
2,506,641	+		Synpcc7942_2432	0.85	+0.4
2,506,641	-		Synpcc7942_2432	0.85	+0.0
2,506,643	-		Synpcc7942_2432	0.86	+0.9
2,506,643	-		Synpcc7942_2432	0.86	-0.6
2,506,674	+				+1.9
2,506,674	-				-0.4
2,506,681	-				+0.9
2,506,684	+				-2.1
2,506,684	+				+0.3
2,507,619	-				+1.2
2,507,619	-				+1.3