Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2337

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,403,614	+	fbp	Synpcc7942_2335	0.67	+0.1
2,403,615	+	fbp	Synpcc7942_2335	0.67	+0.5
2,403,623	-	fbp	Synpcc7942_2335	0.68	+0.9
2,403,676	-	fbp	Synpcc7942_2335	0.73	+0.1
2,403,696	+	fbp	Synpcc7942_2335	0.75	+1.4
2,403,725	+	fbp	Synpcc7942_2335	0.78	-0.6
2,403,725	+	fbp	Synpcc7942_2335	0.78	+0.6
2,403,733	-	fbp	Synpcc7942_2335	0.78	+1.3
2,403,745	-	fbp	Synpcc7942_2335	0.80	+0.7
2,403,803	-	fbp	Synpcc7942_2335	0.85	+2.3
2,403,814	+	fbp	Synpcc7942_2335	0.86	-1.3
2,403,822	-	fbp	Synpcc7942_2335	0.87	+1.9
2,403,822	-	fbp	Synpcc7942_2335	0.87	+0.9
2,403,835	-	fbp	Synpcc7942_2335	0.88	+0.5
2,403,842	+	fbp	Synpcc7942_2335	0.89	-0.1
2,403,842	+	fbp	Synpcc7942_2335	0.89	+0.4
2,403,842	+	fbp	Synpcc7942_2335	0.89	+1.8
2,403,842	+	fbp	Synpcc7942_2335	0.89	+0.5
2,403,842	+	fbp	Synpcc7942_2335	0.89	-0.7
2,403,850	-	fbp	Synpcc7942_2335	0.90	+0.6
2,403,850	-	fbp	Synpcc7942_2335	0.90	-1.0
2,403,850	-	fbp	Synpcc7942_2335	0.90	+1.6
2,403,850	-	fbp	Synpcc7942_2335	0.90	+0.7
2,403,850	-	fbp	Synpcc7942_2335	0.90	+2.1
2,403,850	-	fbp	Synpcc7942_2335	0.90	+1.2
2,403,850	-	fbp	Synpcc7942_2335	0.90	-1.3
2,403,850	-				-0.1
2,403,856	+				-0.1
2,403,863	+				-0.8
2,403,883	-				-1.7
2,403,895	+				-1.1
2,403,908	-				-0.5
2,403,918	+				-0.8
2,403,926	-				+2.5
2,403,926	-				+0.2
2,403,944	+				-2.4
2,403,944	+				-0.0
2,403,947	-				-2.1
2,403,952	-				+2.2
2,403,967	+				+0.8
2,404,036	+				+2.1
2,404,040	-				-0.1
2,404,044	+				-1.8
2,404,053	+				+1.2
2,404,061	-				-1.7
2,404,068	+				+0.5
2,404,076	-				-0.5
2,404,076	-				-1.7
2,404,082	+				+0.5
2,404,175	+				+0.4
2,404,176	+				+0.5
2,404,177	+				+1.2
2,404,177	+				+0.1
2,404,177	+				+2.1
2,404,177	+				-1.1
2,404,185	-				+0.2
2,404,185	-				-2.7
2,404,185	-				-0.1
2,404,196	-				+0.7
2,404,214	+				-1.1
2,404,219	+				+0.2
2,404,222	-				+1.5
2,404,224	+				-0.1
2,404,224	+				+1.4
2,404,224	+				+0.0
2,404,227	-				+2.1
2,404,227	-				-1.9
2,404,227	-				-1.7
2,404,255	-		Synpcc7942_2336	0.22	+1.2
2,404,263	+		Synpcc7942_2336	0.27	+0.3
2,404,329	+		Synpcc7942_2336	0.65	+2.5
2,404,329	+		Synpcc7942_2336	0.65	+0.7
2,404,385	+				+1.0
2,404,388	+				+1.4
2,404,395	-				+1.0
2,404,411	+				+1.6
2,404,419	-				-0.1
2,404,419	-				+0.2
2,404,419	-				-0.8
2,404,419	-				+1.7
2,404,419	-				+1.7
2,404,419	-				+0.3
2,404,437	-				+0.8
2,404,460	-				+2.2
2,404,515	+				+0.3
2,404,530	+				+0.4
2,404,558	+				+2.2
2,404,566	-				+0.5
2,404,571	+				-1.7
2,404,579	-				+0.5
2,404,580	-				-1.1
2,404,603	-				+1.2
2,404,623	-				+0.8
2,404,625	-				-0.1
2,404,628	-				-1.0
2,404,648	+				-1.7
2,404,648	+				-0.4
2,404,648	+				-1.4
2,404,656	-				-0.4
2,404,674	-				-1.1
2,404,741	-		Synpcc7942_2337	0.15	-0.1
2,404,741	-		Synpcc7942_2337	0.15	+1.1
2,404,745	+		Synpcc7942_2337	0.16	+1.1
2,404,776	+		Synpcc7942_2337	0.19	-0.7
2,404,778	+		Synpcc7942_2337	0.19	-0.1
2,404,817	-		Synpcc7942_2337	0.23	+1.1
2,404,899	-		Synpcc7942_2337	0.32	-0.1
2,404,954	-		Synpcc7942_2337	0.37	+1.9
2,404,985	+		Synpcc7942_2337	0.41	+1.4
2,404,988	-		Synpcc7942_2337	0.41	-3.1
2,404,999	-		Synpcc7942_2337	0.42	-0.7
2,405,034	+		Synpcc7942_2337	0.46	-2.4
2,405,042	-		Synpcc7942_2337	0.47	-1.1
2,405,047	+		Synpcc7942_2337	0.47	+1.5
2,405,048	+		Synpcc7942_2337	0.47	+2.2
2,405,050	-		Synpcc7942_2337	0.47	-1.7
2,405,075	-		Synpcc7942_2337	0.50	-1.1
2,405,086	+		Synpcc7942_2337	0.51	-0.1
2,405,094	-		Synpcc7942_2337	0.52	+0.5
2,405,094	-		Synpcc7942_2337	0.52	+1.2
2,405,114	+		Synpcc7942_2337	0.54	+0.3
2,405,122	-		Synpcc7942_2337	0.55	+0.9
2,405,154	-		Synpcc7942_2337	0.58	+0.6
2,405,225	+		Synpcc7942_2337	0.66	-0.3
2,405,242	+		Synpcc7942_2337	0.68	+1.4
2,405,348	+		Synpcc7942_2337	0.79	+1.5
2,405,356	-		Synpcc7942_2337	0.80	+1.1
2,405,425	-		Synpcc7942_2337	0.87	+0.4
2,405,437	+		Synpcc7942_2337	0.88	+1.8
2,405,437	+		Synpcc7942_2337	0.88	-1.4
2,405,437	+		Synpcc7942_2337	0.88	-0.7
2,405,445	-		Synpcc7942_2337	0.89	+1.4
2,405,445	-		Synpcc7942_2337	0.89	+0.7
2,405,445	-		Synpcc7942_2337	0.89	-1.1
2,405,455	-				+0.4
2,405,464	-				+2.7
2,405,491	-				+0.9
2,405,493	+				+1.5
2,405,516	+				+0.2
2,405,524	-				-0.8
2,405,546	+				-1.3
2,405,596	+				+0.6
2,405,624	+				+1.9
2,405,669	+				+0.7
2,405,682	+				+1.1
2,405,694	-				-1.3
2,405,699	-				+0.2
2,405,715	+				+2.9
2,405,759	-				-3.4
2,405,764	-				+2.1
2,405,777	-				-2.9
2,405,791	-				-0.2
2,405,799	+				+0.2
2,405,812	-				-3.7
2,405,817	-				+0.4
2,405,845	+				+1.3
2,405,845	+				+1.9
2,405,853	+				+1.3
2,405,853	+				-3.5
2,405,853	-				-0.5
2,405,893	-				-0.1
2,405,898	-				+1.0
2,405,966	+		Synpcc7942_2338	0.13	+1.0
2,405,970	+		Synpcc7942_2338	0.13	-0.2
2,405,980	+		Synpcc7942_2338	0.14	+2.0
2,405,982	+		Synpcc7942_2338	0.14	-0.8
2,405,982	+		Synpcc7942_2338	0.14	+0.2
2,405,982	+		Synpcc7942_2338	0.14	-3.4
2,405,990	-		Synpcc7942_2338	0.15	+1.2
2,405,990	-		Synpcc7942_2338	0.15	+1.5
2,405,990	-		Synpcc7942_2338	0.15	+2.4
2,405,991	+		Synpcc7942_2338	0.15	+0.5
2,405,992	+		Synpcc7942_2338	0.16	+0.1
2,405,992	+		Synpcc7942_2338	0.16	+2.9
2,406,013	+		Synpcc7942_2338	0.18	-0.7
2,406,013	+		Synpcc7942_2338	0.18	+0.2
2,406,021	-		Synpcc7942_2338	0.19	+0.8
2,406,021	-		Synpcc7942_2338	0.19	+0.8
2,406,021	-		Synpcc7942_2338	0.19	-1.9
2,406,021	-		Synpcc7942_2338	0.19	-1.9
2,406,021	-		Synpcc7942_2338	0.19	-0.3
2,406,029	+		Synpcc7942_2338	0.20	+0.2
2,406,067	+		Synpcc7942_2338	0.24	+0.2
2,406,127	+		Synpcc7942_2338	0.30	-1.7
2,406,148	+		Synpcc7942_2338	0.33	-2.1
2,406,165	+		Synpcc7942_2338	0.34	+0.7
2,406,194	+		Synpcc7942_2338	0.38	+0.4
2,406,200	-		Synpcc7942_2338	0.38	-0.4
2,406,202	-		Synpcc7942_2338	0.38	+0.7
2,406,205	+		Synpcc7942_2338	0.39	+1.2
2,406,253	+		Synpcc7942_2338	0.44	+0.3
2,406,290	+		Synpcc7942_2338	0.48	-1.1
2,406,296	-		Synpcc7942_2338	0.49	+1.0
2,406,344	+		Synpcc7942_2338	0.54	-0.1
2,406,436	-		Synpcc7942_2338	0.64	+0.9
2,406,495	+		Synpcc7942_2338	0.70	+0.9
2,406,503	-		Synpcc7942_2338	0.71	+0.3
2,406,511	+		Synpcc7942_2338	0.72	+0.7
2,406,513	-		Synpcc7942_2338	0.72	-2.4
2,406,519	-		Synpcc7942_2338	0.73	-1.4
2,406,519	-		Synpcc7942_2338	0.73	+1.2
2,406,536	-		Synpcc7942_2338	0.75	+0.2