Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2240

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,304,972	+				+0.9
2,304,972	+				+1.7
2,304,972	+				+0.0
2,304,972	+				+0.2
2,304,974	+				+0.5
2,305,020	-				+0.9
2,305,039	+				+1.7
2,305,073	-				+0.3
2,305,111	-				+0.6
2,305,303	+				+1.7
2,305,306	-				+2.7
2,305,395	-		Synpcc7942_2239	0.23	-1.5
2,305,402	+		Synpcc7942_2239	0.24	-1.1
2,305,424	+		Synpcc7942_2239	0.29	-2.9
2,305,426	+		Synpcc7942_2239	0.29	-1.7
2,305,426	+		Synpcc7942_2239	0.29	-0.1
2,305,432	-		Synpcc7942_2239	0.30	-0.3
2,305,432	-		Synpcc7942_2239	0.30	-0.5
2,305,442	-		Synpcc7942_2239	0.32	-0.1
2,305,475	-		Synpcc7942_2239	0.39	+0.6
2,305,512	-		Synpcc7942_2239	0.46	+0.2
2,305,528	+		Synpcc7942_2239	0.49	-1.7
2,305,534	-		Synpcc7942_2239	0.50	+0.2
2,305,561	+		Synpcc7942_2239	0.55	+0.3
2,305,662	-		Synpcc7942_2239	0.75	+0.5
2,305,708	-		Synpcc7942_2239	0.84	+0.3
2,305,710	-		Synpcc7942_2239	0.84	+1.9
2,305,710	-		Synpcc7942_2239	0.84	+0.3
2,305,722	+		Synpcc7942_2239	0.86	+0.9
2,305,732	-		Synpcc7942_2239	0.88	-0.7
2,305,802	+				+1.7
2,305,802	+				+0.8
2,305,802	+				+0.2
2,305,802	+				+2.1
2,305,802	+				+0.8
2,305,802	+				-2.4
2,305,802	+				-0.1
2,305,802	+				+0.7
2,305,810	-				+1.0
2,305,810	-				+2.8
2,305,810	-				-1.7
2,305,810	-				+0.0
2,305,810	-				+0.9
2,305,810	-				+0.7
2,305,886	+				-0.5
2,305,886	+				-0.7
2,305,894	-				+0.9
2,305,895	-				+1.9
2,305,921	+				-2.7
2,306,383	+	ycf52	Synpcc7942_2240	0.79	+0.6
2,306,395	+	ycf52	Synpcc7942_2240	0.82	+0.3
2,306,400	+	ycf52	Synpcc7942_2240	0.83	-3.3
2,306,400	+	ycf52	Synpcc7942_2240	0.83	+1.4
2,306,428	-	ycf52	Synpcc7942_2240	0.88	+2.2
2,306,439	+				-0.9
2,306,447	-				+0.7
2,306,485	+				-0.7
2,306,493	-				-0.7
2,306,510	+				+1.1
2,306,536	+				-1.1
2,306,536	+				-1.6
2,306,536	+				-0.8
2,306,536	+				+0.1
2,306,536	+				-0.1
2,306,536	+				+1.4
2,306,536	+				-0.1
2,306,544	-				+2.0
2,306,544	-				-0.8
2,306,544	-				-0.9
2,306,544	-				+1.3
2,306,544	-				+0.6
2,306,551	-				+2.0
2,306,578	-				-1.4
2,306,595	+				+0.8
2,306,595	+				+0.5
2,306,657	-		Synpcc7942_2241	0.13	+0.8
2,306,657	-		Synpcc7942_2241	0.13	-2.4
2,306,657	-		Synpcc7942_2241	0.13	+0.6
2,306,694	+		Synpcc7942_2241	0.17	+1.8
2,306,702	-		Synpcc7942_2241	0.18	-0.8
2,306,713	-		Synpcc7942_2241	0.19	+1.3
2,306,717	+		Synpcc7942_2241	0.20	+1.1
2,306,743	-		Synpcc7942_2241	0.23	-2.1
2,306,773	-		Synpcc7942_2241	0.26	-1.1
2,306,777	+		Synpcc7942_2241	0.26	-1.5
2,306,777	+		Synpcc7942_2241	0.26	+0.7
2,306,806	-		Synpcc7942_2241	0.30	-0.8
2,306,809	-		Synpcc7942_2241	0.30	+0.2
2,306,819	-		Synpcc7942_2241	0.31	+2.0
2,306,822	+		Synpcc7942_2241	0.32	-0.8
2,306,828	-		Synpcc7942_2241	0.32	+0.1
2,306,828	-		Synpcc7942_2241	0.32	-1.1
2,306,884	-		Synpcc7942_2241	0.39	-0.5
2,306,887	-		Synpcc7942_2241	0.39	-1.3
2,306,920	+		Synpcc7942_2241	0.43	-1.9
2,306,928	-		Synpcc7942_2241	0.44	+0.1
2,306,928	-		Synpcc7942_2241	0.44	-1.4
2,306,991	+		Synpcc7942_2241	0.51	+0.3
2,307,005	+		Synpcc7942_2241	0.53	-0.6
2,307,014	+		Synpcc7942_2241	0.54	-0.8
2,307,014	+				-0.1
2,307,022	-		Synpcc7942_2241	0.55	-1.7
2,307,022	-		Synpcc7942_2241	0.55	-0.7
2,307,022	-		Synpcc7942_2241	0.55	-1.1
2,307,022	-		Synpcc7942_2241	0.55	+0.7
2,307,023	+		Synpcc7942_2241	0.55	+0.4
2,307,043	+		Synpcc7942_2241	0.57	+0.6
2,307,051	-		Synpcc7942_2241	0.58	+1.4
2,307,092	-		Synpcc7942_2241	0.63	-0.1
2,307,093	+		Synpcc7942_2241	0.63	+0.2
2,307,103	+		Synpcc7942_2241	0.64	+1.0
2,307,103	+		Synpcc7942_2241	0.64	-1.7
2,307,103	+		Synpcc7942_2241	0.64	+0.4
2,307,111	-		Synpcc7942_2241	0.65	+0.7
2,307,111	-		Synpcc7942_2241	0.65	+1.5
2,307,111	-		Synpcc7942_2241	0.65	-0.1
2,307,111	-		Synpcc7942_2241	0.65	-0.1
2,307,116	+		Synpcc7942_2241	0.65	+1.9
2,307,116	-		Synpcc7942_2241	0.65	+1.4
2,307,127	-		Synpcc7942_2241	0.67	-2.1
2,307,142	-		Synpcc7942_2241	0.68	-0.1
2,307,202	-		Synpcc7942_2241	0.75	-0.4
2,307,212	+		Synpcc7942_2241	0.76	-0.7
2,307,248	+		Synpcc7942_2241	0.80	-2.4
2,307,248	+		Synpcc7942_2241	0.80	-2.4
2,307,261	+				-1.1
2,307,283	+				+0.7
2,307,306	-				-0.1
2,307,306	-				-2.9
2,307,308	+				+0.2
2,307,319	+				+0.5
2,307,349	-				-2.4
2,307,351	-				-2.0
2,307,358	+				-0.4
2,307,361	-				-3.4
2,307,433	+				-0.1
2,307,441	-				-0.1
2,307,443	+		Synpcc7942_2242	0.19	-1.5
2,307,459	+		Synpcc7942_2242	0.21	+0.1
2,307,459	+		Synpcc7942_2242	0.21	-3.1
2,307,459	+		Synpcc7942_2242	0.21	-1.1
2,307,467	-		Synpcc7942_2242	0.21	-3.1
2,307,469	+		Synpcc7942_2242	0.22	-1.3
2,307,474	+		Synpcc7942_2242	0.22	-0.5