Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2187

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,264,704	+	nha7	Synpcc7942_2186	0.39	-1.3
2,264,718	+	nha7	Synpcc7942_2186	0.39	+0.9
2,264,747	-	nha7	Synpcc7942_2186	0.41	+1.4
2,264,752	+	nha7	Synpcc7942_2186	0.41	-1.1
2,264,752	+	nha7	Synpcc7942_2186	0.41	-0.2
2,264,760	-	nha7	Synpcc7942_2186	0.42	-1.5
2,264,785	-	nha7	Synpcc7942_2186	0.43	+0.5
2,264,785	-	nha7	Synpcc7942_2186	0.43	-2.7
2,264,800	+	nha7	Synpcc7942_2186	0.44	+1.1
2,264,800	+	nha7	Synpcc7942_2186	0.44	+1.4
2,264,800	+	nha7	Synpcc7942_2186	0.44	-0.6
2,264,808	-	nha7	Synpcc7942_2186	0.45	+1.2
2,264,808	-	nha7	Synpcc7942_2186	0.45	+0.6
2,264,808	-	nha7	Synpcc7942_2186	0.45	-1.5
2,264,812	+	nha7	Synpcc7942_2186	0.45	-1.7
2,264,850	-				+2.7
2,264,856	+	nha7	Synpcc7942_2186	0.48	-0.3
2,264,861	+	nha7	Synpcc7942_2186	0.48	+1.4
2,264,864	-	nha7	Synpcc7942_2186	0.48	+0.8
2,264,910	-	nha7	Synpcc7942_2186	0.51	-0.0
2,264,947	+	nha7	Synpcc7942_2186	0.53	+1.4
2,264,955	+	nha7	Synpcc7942_2186	0.54	-1.8
2,264,955	+	nha7	Synpcc7942_2186	0.54	+0.7
2,264,963	-	nha7	Synpcc7942_2186	0.54	-1.3
2,264,968	-	nha7	Synpcc7942_2186	0.55	+0.4
2,264,970	+	nha7	Synpcc7942_2186	0.55	-0.1
2,264,970	+	nha7	Synpcc7942_2186	0.55	+1.2
2,264,970	+	nha7	Synpcc7942_2186	0.55	+0.2
2,264,971	+	nha7	Synpcc7942_2186	0.55	-1.7
2,264,975	+	nha7	Synpcc7942_2186	0.55	-0.5
2,264,975	+	nha7	Synpcc7942_2186	0.55	-0.6
2,265,004	+	nha7	Synpcc7942_2186	0.57	-2.1
2,265,067	+	nha7	Synpcc7942_2186	0.61	+0.8
2,265,068	-				-1.7
2,265,140	-	nha7	Synpcc7942_2186	0.65	-1.7
2,265,143	+	nha7	Synpcc7942_2186	0.65	+1.3
2,265,149	+	nha7	Synpcc7942_2186	0.66	-0.6
2,265,157	+	nha7	Synpcc7942_2186	0.66	+0.5
2,265,165	-	nha7	Synpcc7942_2186	0.67	+0.2
2,265,186	+				-1.1
2,265,194	-	nha7	Synpcc7942_2186	0.68	+2.1
2,265,201	-	nha7	Synpcc7942_2186	0.69	+1.8
2,265,205	+	nha7	Synpcc7942_2186	0.69	-0.1
2,265,213	-	nha7	Synpcc7942_2186	0.70	+0.9
2,265,236	+	nha7	Synpcc7942_2186	0.71	+1.5
2,265,244	-	nha7	Synpcc7942_2186	0.71	+0.2
2,265,244	-				-1.1
2,265,270	+	nha7	Synpcc7942_2186	0.73	-1.7
2,265,270	+	nha7	Synpcc7942_2186	0.73	-0.4
2,265,278	-	nha7	Synpcc7942_2186	0.74	-0.3
2,265,278	-	nha7	Synpcc7942_2186	0.74	+1.4
2,265,280	+				+0.9
2,265,283	-	nha7	Synpcc7942_2186	0.74	+0.7
2,265,295	+	nha7	Synpcc7942_2186	0.75	+3.4
2,265,318	+	nha7	Synpcc7942_2186	0.76	-0.1
2,265,326	-	nha7	Synpcc7942_2186	0.76	+0.4
2,265,347	-	nha7	Synpcc7942_2186	0.78	-0.7
2,265,350	-	nha7	Synpcc7942_2186	0.78	+0.6
2,265,350	-	nha7	Synpcc7942_2186	0.78	-2.1
2,265,354	+	nha7	Synpcc7942_2186	0.78	-0.1
2,265,355	-	nha7	Synpcc7942_2186	0.78	+1.5
2,265,414	-	nha7	Synpcc7942_2186	0.82	+1.5
2,265,430	-	nha7	Synpcc7942_2186	0.83	+1.5
2,265,456	-	nha7	Synpcc7942_2186	0.84	-2.1
2,265,563	-				-1.1
2,265,563	-				-0.1
2,265,563	-				+0.6
2,265,608	-				-0.8
2,265,647	+				-0.1
2,265,703	-				+1.5
2,265,715	+				-1.4
2,265,718	-				+1.3
2,265,749	-		Synpcc7942_2187	0.13	+1.7
2,265,749	-		Synpcc7942_2187	0.13	+0.6
2,265,759	-		Synpcc7942_2187	0.15	+1.2
2,265,773	-		Synpcc7942_2187	0.19	-0.1
2,265,773	-		Synpcc7942_2187	0.19	+1.7
2,265,773	-		Synpcc7942_2187	0.19	+0.0
2,265,775	+		Synpcc7942_2187	0.19	+0.9
2,265,783	-		Synpcc7942_2187	0.21	+0.9
2,265,785	+		Synpcc7942_2187	0.21	-2.7
2,265,785	+		Synpcc7942_2187	0.21	+1.4
2,265,785	+		Synpcc7942_2187	0.21	+0.8
2,265,789	-		Synpcc7942_2187	0.22	+2.1
2,265,793	-		Synpcc7942_2187	0.23	+0.2
2,265,793	-		Synpcc7942_2187	0.23	+2.2
2,265,793	-		Synpcc7942_2187	0.23	-0.8
2,265,803	-		Synpcc7942_2187	0.26	-1.3
2,265,807	+		Synpcc7942_2187	0.27	+2.2
2,265,820	-		Synpcc7942_2187	0.30	+0.2
2,265,822	+		Synpcc7942_2187	0.31	-0.3
2,265,822	+		Synpcc7942_2187	0.31	-2.4
2,265,829	+		Synpcc7942_2187	0.32	-0.7
2,265,860	+		Synpcc7942_2187	0.40	+1.2
2,265,866	+		Synpcc7942_2187	0.41	-1.1
2,265,928	+		Synpcc7942_2187	0.57	+0.6
2,265,979	-		Synpcc7942_2187	0.69	+1.4
2,265,979	-		Synpcc7942_2187	0.69	+1.7
2,265,979	-		Synpcc7942_2187	0.69	+0.8
2,266,007	+		Synpcc7942_2187	0.76	-2.1
2,266,015	-		Synpcc7942_2187	0.78	+0.6
2,266,015	-		Synpcc7942_2187	0.78	+1.1
2,266,030	-		Synpcc7942_2187	0.82	+0.9
2,266,039	+		Synpcc7942_2187	0.84	+0.8
2,266,062	-				-0.7
2,266,064	+				-1.7
2,266,072	-				+1.5
2,266,080	+				-0.6
2,266,082	-				+2.3
2,266,088	-				+0.9
2,266,088	-				+0.3
2,266,098	+				+0.7
2,266,098	+				+1.7
2,266,098	+				-1.1
2,266,098	+				+0.5
2,266,098	+				+1.5
2,266,098	+				-0.7
2,266,105	-				+0.3
2,266,106	-				+0.2
2,266,113	+				-0.2
2,266,116	-				-1.8
2,266,118	+				+2.5
2,266,126	-				-1.3