Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2154

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,237,535	+				+1.4
2,237,561	-				+0.4
2,237,629	-				-3.4
2,237,898	+				-0.8
2,237,924	+				-0.2
2,237,924	+				+0.7
2,237,924	+				+0.7
2,237,945	+				-0.3
2,237,945	+				-0.1
2,237,945	+				-0.8
2,237,953	-				+1.5
2,237,979	+				+1.5
2,237,996	-		Synpcc7942_2153	0.10	-0.4
2,237,999	-		Synpcc7942_2153	0.11	+0.8
2,238,008	+		Synpcc7942_2153	0.12	-2.4
2,238,070	+		Synpcc7942_2153	0.25	-1.1
2,238,165	-		Synpcc7942_2153	0.45	+1.1
2,238,173	+		Synpcc7942_2153	0.47	+0.2
2,238,353	+		Synpcc7942_2153	0.84	-1.1
2,238,464	+				-1.1
2,238,470	+				+1.1
2,238,596	+		Synpcc7942_2154	0.47	-0.1
2,238,622	+		Synpcc7942_2154	0.59	+0.8
2,238,668	-		Synpcc7942_2154	0.82	-0.1
2,238,673	+		Synpcc7942_2154	0.84	+1.0
2,238,713	-				-0.8
2,238,725	+				+3.7
2,238,729	+				-1.6
2,238,729	+				-0.1
2,238,729	+				+0.3
2,238,730	+				-0.1
2,238,730	+				-0.1
2,238,730	+				+1.5
2,238,730	+				+0.3
2,238,730	+				+1.5
2,238,733	-				+0.1
2,238,735	+				-0.3
2,238,738	-				-3.2
2,238,753	+				+1.5
2,238,755	+				-1.6
2,238,760	+				+0.9
2,238,763	+				-0.9
2,238,763	-				+1.3
2,238,765	+				-1.2
2,238,765	+				+1.7
2,238,765	+				+0.7
2,238,774	+				+0.1
2,238,774	+				+0.4
2,238,818	+		Synpcc7942_2155	0.19	-0.5
2,238,831	+		Synpcc7942_2155	0.22	+0.6
2,238,862	+		Synpcc7942_2155	0.29	+1.8
2,238,862	+		Synpcc7942_2155	0.29	+1.4
2,238,862	+		Synpcc7942_2155	0.29	+1.0
2,238,869	+		Synpcc7942_2155	0.31	-1.1
2,238,870	-		Synpcc7942_2155	0.31	-0.5
2,238,911	+		Synpcc7942_2155	0.40	+0.4
2,238,911	+		Synpcc7942_2155	0.40	+2.3
2,238,919	-		Synpcc7942_2155	0.42	+1.4
2,238,937	+		Synpcc7942_2155	0.46	-1.0
2,238,954	+		Synpcc7942_2155	0.50	+1.8
2,238,954	+		Synpcc7942_2155	0.50	+0.1
2,238,960	-		Synpcc7942_2155	0.51	+0.8
2,238,975	+		Synpcc7942_2155	0.55	+0.6
2,238,975	+		Synpcc7942_2155	0.55	-0.1
2,238,975	-		Synpcc7942_2155	0.55	+1.5
2,238,977	+		Synpcc7942_2155	0.55	+1.5
2,238,983	-		Synpcc7942_2155	0.56	+0.6
2,238,985	-		Synpcc7942_2155	0.57	+0.1
2,238,985	-		Synpcc7942_2155	0.57	-1.1
2,239,028	+		Synpcc7942_2155	0.66	-0.8
2,239,028	+		Synpcc7942_2155	0.66	+2.5
2,239,033	-		Synpcc7942_2155	0.68	-0.6
2,239,034	-		Synpcc7942_2155	0.68	-0.6
2,239,105	+		Synpcc7942_2155	0.84	+1.9
2,239,105	+		Synpcc7942_2155	0.84	-0.7
2,239,115	+		Synpcc7942_2155	0.86	-1.1
2,239,145	-				-3.1
2,239,156	-				-0.1
2,239,177	-				-0.5
2,239,188	+				-0.1
2,239,221	-				+0.5
2,239,224	+				-2.1
2,239,227	+				-2.3
2,239,230	-				+0.2
2,239,230	-				-1.1
2,239,230	-				+0.5
2,239,251	-				+0.9
2,239,271	+				-1.9
2,239,294	+				-1.6
2,239,312	+				+1.3
2,239,320	-				-3.9
2,239,320	-				-3.3
2,239,382	+				-1.2
2,239,383	-				-3.1
2,239,392	+				-2.6
2,239,429	+				-3.1
2,239,451	+	glnA	Synpcc7942_2156	0.10	-3.7
2,239,486	-	glnA	Synpcc7942_2156	0.13	-2.4
2,239,528	-	glnA	Synpcc7942_2156	0.16	-2.1
2,239,575	+	glnA	Synpcc7942_2156	0.19	-2.9
2,239,583	-	glnA	Synpcc7942_2156	0.20	-3.9
2,239,624	-	glnA	Synpcc7942_2156	0.22	-3.3
2,239,625	-	glnA	Synpcc7942_2156	0.23	-1.4
2,239,636	-	glnA	Synpcc7942_2156	0.23	-2.9
2,239,641	-	glnA	Synpcc7942_2156	0.24	-0.9
2,239,641	-	glnA	Synpcc7942_2156	0.24	-2.3
2,239,665	-	glnA	Synpcc7942_2156	0.25	-2.2
2,239,665	-	glnA	Synpcc7942_2156	0.25	-1.6