Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2126

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,205,482	-	bcp	Synpcc7942_2124	0.59	-0.5
2,205,500	-	bcp	Synpcc7942_2124	0.61	+1.1
2,205,601	-	bcp	Synpcc7942_2124	0.71	-1.1
2,205,732	-	bcp	Synpcc7942_2124	0.85	-0.1
2,205,732	-	bcp	Synpcc7942_2124	0.85	+1.7
2,205,745	-	bcp	Synpcc7942_2124	0.86	+1.2
2,205,865	-				-1.5
2,205,874	+				+0.3
2,205,874	+				-1.1
2,205,881	+				-0.4
2,205,905	+				+1.7
2,205,905	+				-0.5
2,205,913	-				-1.6
2,205,925	+				+0.7
2,205,925	+				-1.1
2,205,930	+				-0.4
2,205,935	+				+2.0
2,205,935	+				+0.9
2,205,938	-				-0.1
2,205,940	+				+0.6
2,205,943	-				+1.2
2,205,943	-				-0.2
2,205,950	-				+2.1
2,205,961	+				-1.2
2,205,962	+				+1.2
2,205,962	+				-0.8
2,205,962	+				-2.9
2,205,970	-				-1.6
2,205,970	-				+0.7
2,205,970	-				+2.1
2,205,970	-				+0.5
2,205,985	+				+1.5
2,205,987	+				+0.2
2,206,005	-				+1.1
2,206,005	-				-2.0
2,206,017	-				+1.4
2,206,034	-				-2.4
2,206,038	+				-4.3
2,206,046	+		Synpcc7942_2125	0.11	+0.1
2,206,065	-		Synpcc7942_2125	0.16	-1.5
2,206,112	+		Synpcc7942_2125	0.27	-0.2
2,206,114	+		Synpcc7942_2125	0.28	-0.5
2,206,127	-				-0.1
2,206,132	-		Synpcc7942_2125	0.32	-1.0
2,206,132	-		Synpcc7942_2125	0.32	-0.9
2,206,151	-		Synpcc7942_2125	0.37	+0.9
2,206,155	-		Synpcc7942_2125	0.38	-1.1
2,206,185	-		Synpcc7942_2125	0.46	-0.4
2,206,192	+		Synpcc7942_2125	0.47	+0.1
2,206,200	-		Synpcc7942_2125	0.49	-1.6
2,206,200	-		Synpcc7942_2125	0.49	-0.6
2,206,210	-		Synpcc7942_2125	0.52	+0.9
2,206,245	+		Synpcc7942_2125	0.60	+0.5
2,206,245	+		Synpcc7942_2125	0.60	-2.9
2,206,253	-		Synpcc7942_2125	0.62	+0.7
2,206,267	+		Synpcc7942_2125	0.66	+0.9
2,206,267	+		Synpcc7942_2125	0.66	+0.2
2,206,267	+		Synpcc7942_2125	0.66	-0.0
2,206,290	+				-1.1
2,206,291	+		Synpcc7942_2125	0.72	-1.6
2,206,316	-		Synpcc7942_2125	0.78	-2.1
2,206,373	-				-2.6
2,206,395	-				-1.1
2,206,398	+				+1.4
2,206,431	-				-0.5
2,206,433	+				+2.1
2,206,433	+				+0.8
2,206,433	+				+0.2
2,206,433	+				+2.6
2,206,441	-		Synpcc7942_2126	0.10	+0.4
2,206,441	-		Synpcc7942_2126	0.10	-0.1
2,206,441	-		Synpcc7942_2126	0.10	-1.3
2,206,441	-		Synpcc7942_2126	0.10	+0.4
2,206,452	-		Synpcc7942_2126	0.13	+1.5
2,206,456	+		Synpcc7942_2126	0.14	-0.3
2,206,464	-		Synpcc7942_2126	0.16	+0.3
2,206,471	-		Synpcc7942_2126	0.18	+2.1
2,206,519	-		Synpcc7942_2126	0.29	+2.5
2,206,519	-		Synpcc7942_2126	0.29	-0.5
2,206,524	+		Synpcc7942_2126	0.31	+0.1
2,206,532	-		Synpcc7942_2126	0.33	+0.3
2,206,555	+		Synpcc7942_2126	0.38	+0.0
2,206,589	-		Synpcc7942_2126	0.47	-0.2
2,206,600	-		Synpcc7942_2126	0.49	+0.5
2,206,614	-		Synpcc7942_2126	0.53	+0.6
2,206,683	+		Synpcc7942_2126	0.70	-3.1
2,206,683	+		Synpcc7942_2126	0.70	+1.8
2,206,683	+		Synpcc7942_2126	0.70	-3.4
2,206,691	-		Synpcc7942_2126	0.72	+0.6
2,206,691	-		Synpcc7942_2126	0.72	+0.6
2,206,691	-		Synpcc7942_2126	0.72	+1.1
2,206,693	+		Synpcc7942_2126	0.72	-0.1
2,206,700	-		Synpcc7942_2126	0.74	+2.6
2,206,717	-		Synpcc7942_2126	0.78	+1.6
2,206,728	-		Synpcc7942_2126	0.81	+0.1
2,206,728	-		Synpcc7942_2126	0.81	+1.6
2,206,734	+		Synpcc7942_2126	0.82	+1.5
2,206,742	-		Synpcc7942_2126	0.84	-0.4
2,206,742	-		Synpcc7942_2126	0.84	-0.1
2,206,742	-		Synpcc7942_2126	0.84	+1.4
2,206,817	+				+0.1
2,206,817	+				+0.8
2,206,822	-				+3.4
2,206,825	-				+1.5
2,206,825	-				-0.1
2,206,836	+				+2.5
2,206,838	-				+0.1
2,206,844	-				+1.3
2,206,858	+				+0.9
2,206,858	+				+0.7
2,206,858	+				-0.1
2,206,858	+				+0.9
2,206,885	+				+0.9
2,206,888	+				+0.4
2,206,888	+				+2.4
2,206,894	-				-0.3
2,206,935	-				+0.3
2,206,955	+				-2.9
2,207,137	-				+0.9
2,207,152	+				-2.2
2,207,152	+				+0.1
2,207,164	+				+0.9
2,207,198	+	nblA	Synpcc7942_2127	0.17	+0.9
2,207,206	-	nblA	Synpcc7942_2127	0.22	-2.6
2,207,228	-	nblA	Synpcc7942_2127	0.34	-0.7
2,207,231	+	nblA	Synpcc7942_2127	0.36	+0.9
2,207,239	+	nblA	Synpcc7942_2127	0.40	-0.4
2,207,305	+	nblA	Synpcc7942_2127	0.77	-0.1
2,207,305	+	nblA	Synpcc7942_2127	0.77	+0.1
2,207,323	-	nblA	Synpcc7942_2127	0.87	-2.4
2,207,340	+				-0.1
2,207,342	+				-0.1
2,207,348	-				+0.2
2,207,350	-				+0.5
2,207,352	+				-3.1
2,207,360	-				-1.6
2,207,360	-				+1.1
2,207,380	-				+0.7
2,207,420	-				-2.4
2,207,431	-				-1.0
2,207,443	+				-0.1
2,207,491	+				+1.0
2,207,494	-				-1.1
2,207,499	-				-0.7
2,207,511	-				-3.8
2,207,521	+				-0.5
2,207,626	-	txlA	Synpcc7942_2128	0.21	-0.2
2,207,626	-	txlA	Synpcc7942_2128	0.21	-0.1
2,207,626	-	txlA	Synpcc7942_2128	0.21	+0.3