Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2070

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,145,375	-	pilC	Synpcc7942_2069	0.22	-2.4
2,145,380	+	pilC	Synpcc7942_2069	0.22	-3.0
2,145,380	+	pilC	Synpcc7942_2069	0.22	-2.4
2,145,390	-	pilC	Synpcc7942_2069	0.23	-1.8
2,145,391	+	pilC	Synpcc7942_2069	0.23	-4.0
2,145,461	+	pilC	Synpcc7942_2069	0.29	-4.4
2,145,461	+	pilC	Synpcc7942_2069	0.29	-3.5
2,145,469	-	pilC	Synpcc7942_2069	0.29	-1.4
2,145,482	+	pilC	Synpcc7942_2069	0.30	-1.0
2,145,492	+	pilC	Synpcc7942_2069	0.31	-3.6
2,145,561	+	pilC	Synpcc7942_2069	0.37	-2.9
2,145,561	+	pilC	Synpcc7942_2069	0.37	-3.4
2,145,561	+	pilC	Synpcc7942_2069	0.37	-3.0
2,145,569	-	pilC	Synpcc7942_2069	0.37	-1.5
2,145,575	+	pilC	Synpcc7942_2069	0.38	-3.6
2,145,602	-	pilC	Synpcc7942_2069	0.40	-1.4
2,145,668	+	pilC	Synpcc7942_2069	0.45	-3.0
2,145,668	+	pilC	Synpcc7942_2069	0.45	-2.5
2,145,759	-	pilC	Synpcc7942_2069	0.53	-0.2
2,145,759	-	pilC	Synpcc7942_2069	0.53	-2.6
2,145,807	-	pilC	Synpcc7942_2069	0.57	-2.9
2,146,043	-	pilC	Synpcc7942_2069	0.76	-4.3
2,146,135	+	pilC	Synpcc7942_2069	0.83	-6.4
2,146,135	+	pilC	Synpcc7942_2069	0.83	-5.6
2,146,143	-	pilC	Synpcc7942_2069	0.84	-2.0
2,146,148	+	pilC	Synpcc7942_2069	0.84	-2.6
2,146,156	+	pilC	Synpcc7942_2069	0.85	-2.4
2,146,218	-				-3.4
2,146,318	+				-2.9
2,146,318	+				-3.6
2,146,336	-				-2.4
2,146,371	-				-0.4
2,146,380	+				+1.0
2,146,385	-				-0.9
2,146,598	+	pilT	Synpcc7942_2070	0.21	-0.0
2,146,759	+	pilT	Synpcc7942_2070	0.36	+1.2
2,146,762	+	pilT	Synpcc7942_2070	0.36	+1.7
2,146,770	-	pilT	Synpcc7942_2070	0.37	-0.0
2,146,900	-	pilT	Synpcc7942_2070	0.49	+1.0
2,146,906	-	pilT	Synpcc7942_2070	0.50	-1.0
2,146,910	+	pilT	Synpcc7942_2070	0.50	+0.2
2,146,910	+	pilT	Synpcc7942_2070	0.50	+0.9
2,146,925	-	pilT	Synpcc7942_2070	0.51	+1.5
2,146,992	-	pilT	Synpcc7942_2070	0.57	+2.2
2,147,003	+	pilT	Synpcc7942_2070	0.58	-1.0
2,147,051	+	pilT	Synpcc7942_2070	0.63	-0.0
2,147,059	-	pilT	Synpcc7942_2070	0.64	+1.5
2,147,069	-	pilT	Synpcc7942_2070	0.65	-1.0
2,147,079	-	pilT	Synpcc7942_2070	0.65	+2.1
2,147,136	-	pilT	Synpcc7942_2070	0.71	+0.7
2,147,142	-	pilT	Synpcc7942_2070	0.71	-0.0
2,147,189	+	pilT	Synpcc7942_2070	0.76	+3.0
2,147,204	-	pilT	Synpcc7942_2070	0.77	-0.0
2,147,224	-	pilT	Synpcc7942_2070	0.79	+1.0
2,147,237	-	pilT	Synpcc7942_2070	0.80	+2.4
2,147,246	+	pilT	Synpcc7942_2070	0.81	-0.7
2,147,254	-	pilT	Synpcc7942_2070	0.82	+0.8
2,147,254	-	pilT	Synpcc7942_2070	0.82	+0.2
2,147,254	-	pilT	Synpcc7942_2070	0.82	+1.8
2,147,313	+	pilT	Synpcc7942_2070	0.87	+0.7
2,147,321	-	pilT	Synpcc7942_2070	0.88	+0.5
2,147,328	+	pilT	Synpcc7942_2070	0.88	+0.5
2,147,392	-				+0.9
2,147,443	+				-1.6
2,147,462	+				-0.3
2,147,470	-				+2.5
2,147,514	+				+1.0
2,147,550	+				-5.3
2,147,556	+				-2.4
2,147,568	+				-3.2
2,147,608	+				-3.3
2,147,608	+				-3.2
2,147,611	-				-3.1
2,147,611	-				-2.9
2,147,611	-				-1.6
2,147,613	+				-1.6
2,147,616	-				-1.9
2,147,616	-				-3.2
2,147,616	-				-3.3
2,147,625	+				-2.4
2,147,661	-				-1.8
2,147,677	+				-2.4
2,147,682	+				-2.5
2,147,685	-				-2.4
2,147,685	-				-2.7
2,147,685	-				-1.8
2,147,693	+				-3.0
2,147,702	+				-2.8
2,147,702	+				-1.5
2,147,715	+				-1.4
2,147,715	-				-2.4
2,147,717	+				-0.6
2,147,723	+				-3.4
2,147,723	-				-1.6
2,147,723	-				-4.2
2,147,725	-	pilB1	Synpcc7942_2071	0.10	-4.8
2,147,757	+	pilB1	Synpcc7942_2071	0.12	-2.6
2,147,779	+	pilB1	Synpcc7942_2071	0.13	-2.4
2,147,787	-	pilB1	Synpcc7942_2071	0.13	-3.4
2,147,806	-	pilB1	Synpcc7942_2071	0.14	-2.3
2,147,808	+	pilB1	Synpcc7942_2071	0.14	-3.4
2,147,816	-	pilB1	Synpcc7942_2071	0.15	+0.1
2,147,816	-	pilB1	Synpcc7942_2071	0.15	-1.4
2,147,823	+	pilB1	Synpcc7942_2071	0.15	-1.2
2,147,835	-	pilB1	Synpcc7942_2071	0.15	-4.0
2,147,846	+	pilB1	Synpcc7942_2071	0.16	+0.3
2,147,846	+	pilB1	Synpcc7942_2071	0.16	-3.6
2,147,859	-	pilB1	Synpcc7942_2071	0.17	-2.7
2,147,871	+	pilB1	Synpcc7942_2071	0.17	-3.5
2,147,871	+	pilB1	Synpcc7942_2071	0.17	-0.5
2,147,877	+	pilB1	Synpcc7942_2071	0.18	-2.4
2,147,879	-	pilB1	Synpcc7942_2071	0.18	-1.0
2,147,879	-	pilB1	Synpcc7942_2071	0.18	-2.6
2,147,894	+	pilB1	Synpcc7942_2071	0.18	-2.3
2,147,902	-	pilB1	Synpcc7942_2071	0.19	-2.5
2,147,930	-	pilB1	Synpcc7942_2071	0.20	-1.0
2,147,930	-	pilB1	Synpcc7942_2071	0.20	-2.7
2,147,959	-	pilB1	Synpcc7942_2071	0.22	-2.6
2,147,968	+	pilB1	Synpcc7942_2071	0.22	-3.0
2,147,968	+	pilB1	Synpcc7942_2071	0.22	-3.2
2,147,968	+	pilB1	Synpcc7942_2071	0.22	-3.8
2,147,968	+	pilB1	Synpcc7942_2071	0.22	-0.0
2,147,976	-	pilB1	Synpcc7942_2071	0.23	-4.2
2,147,976	-	pilB1	Synpcc7942_2071	0.23	-0.5
2,147,986	-	pilB1	Synpcc7942_2071	0.23	-2.6
2,147,986	-	pilB1	Synpcc7942_2071	0.23	-2.0
2,147,994	-	pilB1	Synpcc7942_2071	0.23	-0.7
2,147,996	-	pilB1	Synpcc7942_2071	0.24	-2.6
2,148,002	+	pilB1	Synpcc7942_2071	0.24	+0.4
2,148,007	+	pilB1	Synpcc7942_2071	0.24	-3.6
2,148,015	-	pilB1	Synpcc7942_2071	0.24	-2.5
2,148,015	-	pilB1	Synpcc7942_2071	0.24	-2.6
2,148,029	-	pilB1	Synpcc7942_2071	0.25	-1.0
2,148,029	-	pilB1	Synpcc7942_2071	0.25	-2.7
2,148,062	-	pilB1	Synpcc7942_2071	0.27	-0.1
2,148,073	+	pilB1	Synpcc7942_2071	0.27	-2.9
2,148,076	-	pilB1	Synpcc7942_2071	0.28	-3.9
2,148,150	-	pilB1	Synpcc7942_2071	0.31	-2.4
2,148,160	-	pilB1	Synpcc7942_2071	0.32	-3.9
2,148,164	+	pilB1	Synpcc7942_2071	0.32	-3.1
2,148,164	+	pilB1	Synpcc7942_2071	0.32	-3.7
2,148,172	-	pilB1	Synpcc7942_2071	0.32	-2.4
2,148,223	+	pilB1	Synpcc7942_2071	0.35	-3.4
2,148,251	+	pilB1	Synpcc7942_2071	0.36	-1.6
2,148,298	+	pilB1	Synpcc7942_2071	0.39	-2.6
2,148,310	+	pilB1	Synpcc7942_2071	0.39	-2.4
2,148,318	-	pilB1	Synpcc7942_2071	0.40	-3.0
2,148,322	-	pilB1	Synpcc7942_2071	0.40	-3.3
2,148,334	-	pilB1	Synpcc7942_2071	0.40	-4.8
2,148,345	+	pilB1	Synpcc7942_2071	0.41	-2.7
2,148,369	-	pilB1	Synpcc7942_2071	0.42	-2.9
2,148,397	-	pilB1	Synpcc7942_2071	0.44	-3.5
2,148,434	+	pilB1	Synpcc7942_2071	0.45	-4.5
2,148,441	+	pilB1	Synpcc7942_2071	0.46	-3.5
2,148,449	-	pilB1	Synpcc7942_2071	0.46	-3.6
2,148,450	+	pilB1	Synpcc7942_2071	0.46	-1.0