Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1991

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,060,931	+				-3.6
2,060,947	+		Synpcc7942_1990	0.12	-3.9
2,060,990	-		Synpcc7942_1990	0.19	-0.8
2,061,023	+		Synpcc7942_1990	0.24	-3.8
2,061,039	-		Synpcc7942_1990	0.26	-2.2
2,061,163	-		Synpcc7942_1990	0.45	-0.3
2,061,205	-		Synpcc7942_1990	0.51	+0.5
2,061,355	+		Synpcc7942_1990	0.74	-2.4
2,061,360	+		Synpcc7942_1990	0.75	-1.1
2,061,360	+		Synpcc7942_1990	0.75	-1.4
2,061,368	-		Synpcc7942_1990	0.76	-3.1
2,061,370	+		Synpcc7942_1990	0.76	+1.7
2,061,378	-		Synpcc7942_1990	0.77	-3.5
2,061,474	+				-1.6
2,061,474	+				-3.2
2,061,482	-				+0.3
2,061,525	-				-2.4
2,061,917	+				-1.6
2,061,927	+				-1.6
2,061,936	-				-0.1
2,062,084	-	mscL	Synpcc7942_1991	0.41	+0.9
2,062,158	+	mscL	Synpcc7942_1991	0.59	+2.1
2,062,203	+	mscL	Synpcc7942_1991	0.70	+2.9
2,062,211	-	mscL	Synpcc7942_1991	0.72	+2.0
2,062,347	-				-0.1
2,062,358	+				+1.2
2,062,364	-				-0.6
2,062,365	-				+0.4
2,062,384	-				-2.4
2,062,390	+				-3.2
2,062,393	-				-2.9
2,062,408	-				+0.9
2,062,424	+				+0.0
2,062,424	+				-0.5
2,062,424	+				-1.1
2,062,434	+				+0.4
2,062,450	+				+1.2
2,062,477	-				-0.3
2,062,618	+	eIF2BA	Synpcc7942_1992	0.22	-0.8
2,062,629	-	eIF2BA	Synpcc7942_1992	0.23	-2.1
2,062,643	-	eIF2BA	Synpcc7942_1992	0.24	-0.1
2,062,699	+	eIF2BA	Synpcc7942_1992	0.30	+0.1
2,062,710	-	eIF2BA	Synpcc7942_1992	0.31	-1.9
2,062,743	+	eIF2BA	Synpcc7942_1992	0.34	-1.9
2,062,805	-	eIF2BA	Synpcc7942_1992	0.40	+1.3
2,062,807	-	eIF2BA	Synpcc7942_1992	0.40	+0.9
2,062,809	+	eIF2BA	Synpcc7942_1992	0.40	+0.1
2,062,817	-	eIF2BA	Synpcc7942_1992	0.41	-0.3
2,062,829	+	eIF2BA	Synpcc7942_1992	0.42	+1.5
2,062,853	-				+1.5
2,062,901	-	eIF2BA	Synpcc7942_1992	0.49	-0.1
2,062,918	-	eIF2BA	Synpcc7942_1992	0.51	-0.7
2,062,919	+	eIF2BA	Synpcc7942_1992	0.51	+0.4
2,062,927	-	eIF2BA	Synpcc7942_1992	0.51	+0.1
2,062,927	-	eIF2BA	Synpcc7942_1992	0.51	+2.9
2,062,927	-	eIF2BA	Synpcc7942_1992	0.51	-0.1
2,062,934	+	eIF2BA	Synpcc7942_1992	0.52	+1.4
2,062,941	+	eIF2BA	Synpcc7942_1992	0.53	-2.8
2,062,967	-	eIF2BA	Synpcc7942_1992	0.55	+0.3
2,062,969	+	eIF2BA	Synpcc7942_1992	0.55	-2.6
2,063,012	-	eIF2BA	Synpcc7942_1992	0.60	-0.3
2,063,046	+				-0.1
2,063,051	+	eIF2BA	Synpcc7942_1992	0.63	+0.6
2,063,087	-	eIF2BA	Synpcc7942_1992	0.67	-0.9
2,063,215	+	eIF2BA	Synpcc7942_1992	0.79	+1.5
2,063,215	+	eIF2BA	Synpcc7942_1992	0.79	-0.9
2,063,237	+	eIF2BA	Synpcc7942_1992	0.81	+0.8
2,063,246	+	eIF2BA	Synpcc7942_1992	0.82	-0.4
2,063,266	-	eIF2BA	Synpcc7942_1992	0.84	-0.6
2,063,301	+	eIF2BA	Synpcc7942_1992	0.87	-0.7
2,063,306	+	eIF2BA	Synpcc7942_1992	0.88	-1.3
2,063,306	+	eIF2BA	Synpcc7942_1992	0.88	-3.8
2,063,314	-	eIF2BA	Synpcc7942_1992	0.88	-1.4