Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1988

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,057,742	-				-1.6
2,057,824	-				+4.3
2,057,919	-	rpaC	Synpcc7942_1987	0.32	-3.5
2,057,924	+	rpaC	Synpcc7942_1987	0.33	+1.5
2,057,932	-	rpaC	Synpcc7942_1987	0.36	+1.4
2,057,938	-	rpaC	Synpcc7942_1987	0.38	-1.0
2,057,940	+	rpaC	Synpcc7942_1987	0.38	-0.6
2,057,948	-	rpaC	Synpcc7942_1987	0.41	-1.3
2,057,948	-	rpaC	Synpcc7942_1987	0.41	+0.9
2,057,976	+	rpaC	Synpcc7942_1987	0.50	+0.7
2,058,039	+	rpaC	Synpcc7942_1987	0.70	+1.2
2,058,044	-	rpaC	Synpcc7942_1987	0.71	+1.2
2,058,172	+				+0.2
2,058,179	-				-2.4
2,058,200	-				-0.8
2,058,247	+				+0.6
2,058,277	+				+2.7
2,058,304	-				-3.1
2,058,368	+				+2.9
2,058,403	+				-0.4
2,058,420	-				+0.5
2,058,422	+				+0.6
2,058,456	-				-1.1
2,058,472	-				+0.2
2,058,472	-				-1.4
2,058,479	-				-2.6
2,058,486	-				-1.8
2,058,488	+				+0.9
2,058,496	+				+2.3
2,058,501	+				-1.1
2,058,504	-				+1.9
2,058,518	+				-0.1
2,058,610	-				+0.8
2,058,638	+				+1.1
2,058,644	-				-0.6
2,058,665	+				-3.5
2,058,665	+				+0.3
2,058,673	-				+1.3
2,058,673	-				+1.4
2,058,722	+				-1.6
2,058,729	+				-1.2
2,058,757	-				+0.6
2,058,770	+				-0.1
2,058,791	-				+0.4
2,058,866	-		Synpcc7942_1988	0.13	-0.1
2,058,957	+		Synpcc7942_1988	0.21	-1.4
2,058,960	-		Synpcc7942_1988	0.21	-4.3
2,059,092	-		Synpcc7942_1988	0.32	-2.9
2,059,092	-		Synpcc7942_1988	0.32	-1.3
2,059,092	-		Synpcc7942_1988	0.32	-2.4
2,059,343	+		Synpcc7942_1988	0.55	-0.1
2,059,343	+		Synpcc7942_1988	0.55	-1.1
2,059,360	-		Synpcc7942_1988	0.56	+0.2
2,059,361	-		Synpcc7942_1988	0.56	-0.6
2,059,507	-		Synpcc7942_1988	0.69	-2.4
2,059,534	+		Synpcc7942_1988	0.71	-2.6
2,059,534	+		Synpcc7942_1988	0.71	-1.6
2,059,534	+		Synpcc7942_1988	0.71	-0.5
2,059,542	-		Synpcc7942_1988	0.72	-1.8
2,059,542	-		Synpcc7942_1988	0.72	-1.1
2,059,576	-		Synpcc7942_1988	0.75	-3.9
2,059,626	-		Synpcc7942_1988	0.80	-3.1
2,059,636	+		Synpcc7942_1988	0.80	-1.3
2,059,676	+		Synpcc7942_1988	0.84	-1.6
2,059,676	+		Synpcc7942_1988	0.84	-1.0
2,059,678	+		Synpcc7942_1988	0.84	-0.5
2,059,684	-		Synpcc7942_1988	0.85	-1.6
2,059,702	+		Synpcc7942_1988	0.86	-3.2
2,059,702	+		Synpcc7942_1988	0.86	-2.9
2,059,702	+		Synpcc7942_1988	0.86	-4.5
2,059,702	+		Synpcc7942_1988	0.86	-1.5
2,059,710	-		Synpcc7942_1988	0.87	-2.4
2,059,727	+		Synpcc7942_1988	0.88	-0.8
2,059,748	+				-2.6
2,059,748	+				-2.4
2,059,756	-				-3.9
2,059,762	+				-0.1
2,059,762	+				-4.1
2,059,770	-				-1.3
2,059,796	+				+0.3
2,059,799	-				+0.5
2,059,993	-				+1.6
2,060,099	+		Synpcc7942_1989	0.21	+0.2
2,060,127	-		Synpcc7942_1989	0.24	+0.1
2,060,135	-		Synpcc7942_1989	0.25	-0.1
2,060,136	+		Synpcc7942_1989	0.25	-1.8
2,060,136	+		Synpcc7942_1989	0.25	+0.0
2,060,137	+		Synpcc7942_1989	0.25	+0.4
2,060,137	+		Synpcc7942_1989	0.25	-0.1
2,060,231	+		Synpcc7942_1989	0.36	-0.8
2,060,251	+		Synpcc7942_1989	0.38	+1.7
2,060,261	-		Synpcc7942_1989	0.39	+0.5
2,060,293	-		Synpcc7942_1989	0.42	-1.2
2,060,605	-		Synpcc7942_1989	0.77	-0.4
2,060,610	-		Synpcc7942_1989	0.77	+0.4
2,060,633	+		Synpcc7942_1989	0.80	+0.2
2,060,704	+		Synpcc7942_1989	0.87	+0.2
2,060,704	+		Synpcc7942_1989	0.87	-1.6
2,060,704	+		Synpcc7942_1989	0.87	-0.1
2,060,712	-		Synpcc7942_1989	0.88	+2.7
2,060,715	+		Synpcc7942_1989	0.89	-0.1
2,060,841	+				-1.1
2,060,841	+				+1.1
2,060,854	-				+1.5