Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1933

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
2,005,615	+		Synpcc7942_1931	0.73	+0.9
2,005,627	-		Synpcc7942_1931	0.74	-1.5
2,005,636	+		Synpcc7942_1931	0.75	-2.1
2,005,650	-		Synpcc7942_1931	0.77	-0.1
2,005,664	+		Synpcc7942_1931	0.79	+0.2
2,005,669	+		Synpcc7942_1931	0.80	-0.1
2,005,672	+		Synpcc7942_1931	0.80	-1.8
2,005,672	-		Synpcc7942_1931	0.80	+0.4
2,005,672	-		Synpcc7942_1931	0.80	+0.3
2,005,688	-		Synpcc7942_1931	0.82	+0.8
2,005,716	-		Synpcc7942_1931	0.86	-1.5
2,005,744	+		Synpcc7942_1931	0.89	+1.5
2,005,744	+		Synpcc7942_1931	0.89	-0.7
2,005,744	+		Synpcc7942_1931	0.89	-2.1
2,005,744	+		Synpcc7942_1931	0.89	+1.2
2,005,744	+		Synpcc7942_1931	0.89	-0.4
2,005,752	-				+1.2
2,005,752	-				+0.1
2,005,752	-				+1.5
2,005,752	-				+0.7
2,005,754	+				-0.3
2,005,759	+				+0.2
2,005,767	-				+0.4
2,005,776	-				+1.1
2,005,782	-				-2.7
2,005,800	+				+0.5
2,005,810	+				+0.2
2,005,813	-				-0.4
2,005,815	+				+0.7
2,005,815	+				-0.3
2,005,815	+				+2.4
2,005,815	+				-0.5
2,005,815	+				-0.1
2,005,823	-				-3.1
2,005,867	+				-1.1
2,005,901	-				-2.9
2,005,915	+				+0.6
2,005,930	+				+0.9
2,005,932	+				+0.2
2,005,933	-				-0.6
2,005,961	+				-0.1
2,005,967	-				-0.1
2,005,995	+				-3.4
2,005,995	+				+2.8
2,006,014	+				-0.1
2,006,014	+				+0.5
2,006,022	-				+0.1
2,006,577	-				-2.4
2,006,585	-				+0.4
2,006,594	-				+1.9
2,006,602	-				-0.3
2,006,612	+				+1.1
2,006,613	-				+0.4
2,006,682	-				+0.3
2,006,682	-				+0.8
2,006,716	+	fni	Synpcc7942_1933	0.12	-0.1
2,006,716	+	fni	Synpcc7942_1933	0.12	+0.6
2,006,722	-	fni	Synpcc7942_1933	0.13	+0.8
2,006,758	-	fni	Synpcc7942_1933	0.16	+0.9
2,006,765	+	fni	Synpcc7942_1933	0.17	+1.0
2,006,773	-	fni	Synpcc7942_1933	0.18	-0.1
2,006,790	+	fni	Synpcc7942_1933	0.19	+1.9
2,006,853	-	fni	Synpcc7942_1933	0.25	+0.1
2,006,885	+				+2.1
2,006,902	+	fni	Synpcc7942_1933	0.30	+0.2
2,006,910	-	fni	Synpcc7942_1933	0.31	+1.3
2,006,910	-	fni	Synpcc7942_1933	0.31	+1.3
2,006,936	-	fni	Synpcc7942_1933	0.33	+1.4
2,006,989	-	fni	Synpcc7942_1933	0.38	+0.1
2,006,999	-	fni	Synpcc7942_1933	0.39	+0.4
2,006,999	-	fni	Synpcc7942_1933	0.39	-0.5
2,007,017	+	fni	Synpcc7942_1933	0.41	+0.6
2,007,021	-	fni	Synpcc7942_1933	0.41	+0.6
2,007,081	+	fni	Synpcc7942_1933	0.47	+0.6
2,007,081	+	fni	Synpcc7942_1933	0.47	+1.5
2,007,083	+	fni	Synpcc7942_1933	0.47	+1.0
2,007,104	+	fni	Synpcc7942_1933	0.49	+0.0
2,007,112	-	fni	Synpcc7942_1933	0.50	+1.1
2,007,146	+	fni	Synpcc7942_1933	0.53	+0.0
2,007,154	-	fni	Synpcc7942_1933	0.54	-1.0
2,007,198	-	fni	Synpcc7942_1933	0.58	+0.4
2,007,205	-	fni	Synpcc7942_1933	0.59	+0.3
2,007,212	-	fni	Synpcc7942_1933	0.60	+2.8
2,007,242	-	fni	Synpcc7942_1933	0.62	+1.1
2,007,248	+	fni	Synpcc7942_1933	0.63	+0.5
2,007,279	-	fni	Synpcc7942_1933	0.66	+0.7
2,007,279	-	fni	Synpcc7942_1933	0.66	+1.9
2,007,476	-	fni	Synpcc7942_1933	0.85	+0.9
2,007,476	-	fni	Synpcc7942_1933	0.85	+1.1
2,007,498	-	fni	Synpcc7942_1933	0.87	+0.6
2,007,499	-	fni	Synpcc7942_1933	0.87	+0.7
2,007,522	+	fni	Synpcc7942_1933	0.89	+0.7
2,007,565	-				+1.0
2,007,567	+				+0.1
2,007,647	+				+1.5
2,007,675	-				+0.3
2,007,675	-				+0.4
2,007,690	-				-0.5
2,007,697	-				-0.1
2,007,705	+				+0.5
2,007,713	+				+1.0
2,007,713	-				+0.3
2,007,789	-	dacB	Synpcc7942_1934	0.11	+0.6
2,007,840	+	dacB	Synpcc7942_1934	0.15	-0.1
2,007,840	+	dacB	Synpcc7942_1934	0.15	+1.8
2,007,840	+	dacB	Synpcc7942_1934	0.15	-1.1
2,007,848	-	dacB	Synpcc7942_1934	0.15	+0.7
2,007,848	-				-0.1
2,007,861	+	dacB	Synpcc7942_1934	0.16	+0.1
2,007,893	-	dacB	Synpcc7942_1934	0.19	-2.7
2,007,949	+	dacB	Synpcc7942_1934	0.23	+0.8
2,007,997	-	dacB	Synpcc7942_1934	0.26	-1.0
2,007,998	-	dacB	Synpcc7942_1934	0.26	-0.5
2,008,012	+	dacB	Synpcc7942_1934	0.27	+1.6
2,008,020	-	dacB	Synpcc7942_1934	0.28	+0.5
2,008,042	-	dacB	Synpcc7942_1934	0.30	-0.1
2,008,051	+	dacB	Synpcc7942_1934	0.30	+0.5
2,008,051	+	dacB	Synpcc7942_1934	0.30	+1.6
2,008,051	+	dacB	Synpcc7942_1934	0.30	+1.3
2,008,051	+	dacB	Synpcc7942_1934	0.30	-0.3
2,008,059	-	dacB	Synpcc7942_1934	0.31	+1.9
2,008,062	-	dacB	Synpcc7942_1934	0.31	+0.6
2,008,074	-	dacB	Synpcc7942_1934	0.32	-1.3
2,008,094	+	dacB	Synpcc7942_1934	0.34	-0.7
2,008,141	-	dacB	Synpcc7942_1934	0.37	+1.4
2,008,154	+	dacB	Synpcc7942_1934	0.38	-1.6
2,008,181	+	dacB	Synpcc7942_1934	0.40	+0.5
2,008,210	-	dacB	Synpcc7942_1934	0.42	+0.5
2,008,259	-	dacB	Synpcc7942_1934	0.46	+1.0
2,008,259	-	dacB	Synpcc7942_1934	0.46	-0.6
2,008,265	+	dacB	Synpcc7942_1934	0.46	-2.4
2,008,336	-	dacB	Synpcc7942_1934	0.51	-1.3
2,008,377	+	dacB	Synpcc7942_1934	0.55	+0.9
2,008,386	+	dacB	Synpcc7942_1934	0.55	-0.1
2,008,406	+	dacB	Synpcc7942_1934	0.57	+2.1
2,008,430	+	dacB	Synpcc7942_1934	0.58	-1.1
2,008,430	+	dacB	Synpcc7942_1934	0.58	-0.7
2,008,430	+	dacB	Synpcc7942_1934	0.58	+0.2
2,008,430	+	dacB	Synpcc7942_1934	0.58	+0.7
2,008,438	-	dacB	Synpcc7942_1934	0.59	-1.6
2,008,438	-	dacB	Synpcc7942_1934	0.59	+0.3
2,008,438	-	dacB	Synpcc7942_1934	0.59	-2.4
2,008,438	-	dacB	Synpcc7942_1934	0.59	-3.6
2,008,463	+	dacB	Synpcc7942_1934	0.61	-2.4
2,008,471	-	dacB	Synpcc7942_1934	0.61	-0.4
2,008,471	-	dacB	Synpcc7942_1934	0.61	-0.4
2,008,491	+	dacB	Synpcc7942_1934	0.63	-2.4
2,008,491	+				-0.1
2,008,491	+	dacB	Synpcc7942_1934	0.63	+2.1
2,008,498	+	dacB	Synpcc7942_1934	0.63	-1.0
2,008,498	+	dacB	Synpcc7942_1934	0.63	-1.7
2,008,498	+	dacB	Synpcc7942_1934	0.63	-0.3
2,008,498	-	dacB	Synpcc7942_1934	0.63	-1.7
2,008,498	-	dacB	Synpcc7942_1934	0.63	+1.5
2,008,499	-	dacB	Synpcc7942_1934	0.64	+1.0
2,008,514	+				+0.9
2,008,532	-	dacB	Synpcc7942_1934	0.66	-1.7
2,008,551	-	dacB	Synpcc7942_1934	0.67	+0.1
2,008,551	-	dacB	Synpcc7942_1934	0.67	+0.9
2,008,583	+	dacB	Synpcc7942_1934	0.70	+0.6
2,008,583	+	dacB	Synpcc7942_1934	0.70	-0.0
2,008,583	+	dacB	Synpcc7942_1934	0.70	-0.1
2,008,583	+	dacB	Synpcc7942_1934	0.70	-0.7
2,008,583	+				-0.1
2,008,591	-	dacB	Synpcc7942_1934	0.70	-0.1
2,008,591	-	dacB	Synpcc7942_1934	0.70	+4.7
2,008,591	-	dacB	Synpcc7942_1934	0.70	+1.5
2,008,591	-	dacB	Synpcc7942_1934	0.70	-1.9
2,008,591	-	dacB	Synpcc7942_1934	0.70	+0.7
2,008,591	-	dacB	Synpcc7942_1934	0.70	+2.2
2,008,591	-	dacB	Synpcc7942_1934	0.70	-2.1
2,008,601	-	dacB	Synpcc7942_1934	0.71	+1.5
2,008,615	+	dacB	Synpcc7942_1934	0.72	-1.1
2,008,615	+	dacB	Synpcc7942_1934	0.72	-0.3
2,008,623	-	dacB	Synpcc7942_1934	0.73	-2.1
2,008,623	-	dacB	Synpcc7942_1934	0.73	+0.9