Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1914

Experiment: Ceftazidime 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.0625 mg/ml
1,989,592	+				-0.1
1,989,612	+				-2.1
1,989,612	+				-0.6
1,989,743	+	psaM	Synpcc7942_1912a	0.16	-0.5
1,989,759	+	psaM	Synpcc7942_1912a	0.33	-2.9
1,989,761	-	psaM	Synpcc7942_1912a	0.36	+0.0
1,989,813	+				-1.1
1,989,829	+				-2.7
1,989,837	-				+0.2
1,989,869	-				+1.2
1,989,949	+				-1.4
1,990,073	+		Synpcc7942_1913	0.26	+0.3
1,990,075	-		Synpcc7942_1913	0.26	-2.1
1,990,359	-				-0.1
1,990,380	-				+0.4
1,990,419	-				+0.9
1,990,453	-		Synpcc7942_1914	0.13	-2.4
1,990,477	+		Synpcc7942_1914	0.18	+1.1
1,990,526	+		Synpcc7942_1914	0.29	+1.4
1,990,578	+		Synpcc7942_1914	0.40	+1.0
1,990,586	-		Synpcc7942_1914	0.42	+1.4
1,990,596	+		Synpcc7942_1914	0.44	-2.2
1,990,604	-		Synpcc7942_1914	0.46	-2.1
1,990,618	-		Synpcc7942_1914	0.49	-1.7
1,990,629	-		Synpcc7942_1914	0.51	+0.6
1,990,629	-		Synpcc7942_1914	0.51	+0.6
1,990,641	-		Synpcc7942_1914	0.54	+0.3
1,990,648	+		Synpcc7942_1914	0.55	-1.9
1,990,648	+		Synpcc7942_1914	0.55	-0.9
1,990,651	-		Synpcc7942_1914	0.56	+1.0
1,990,656	-				+3.5
1,990,656	-		Synpcc7942_1914	0.57	+0.4
1,990,680	-		Synpcc7942_1914	0.62	-1.7
1,990,680	-		Synpcc7942_1914	0.62	+2.0
1,990,713	+		Synpcc7942_1914	0.69	+0.9
1,990,735	-		Synpcc7942_1914	0.74	+2.7
1,990,788	-		Synpcc7942_1914	0.86	+0.6
1,990,803	+		Synpcc7942_1914	0.89	-2.1
1,990,811	-				-0.3
1,990,828	+				-1.1
1,990,828	+				+0.6
1,990,836	-				-2.4
1,990,836	-				+0.4
1,990,836	-				-0.1
1,990,846	-				+1.2
1,990,846	-				-2.1
1,990,847	+				-0.2
1,990,855	-				-2.2
1,990,863	+				-1.7
1,990,871	-				-0.1
1,990,876	-				-0.7
1,990,876	-				+1.0
1,990,888	+				+0.0
1,990,904	-				+1.3
1,990,915	+				-0.4
1,990,930	+				-0.8
1,990,938	-				-3.1
1,990,966	+				+0.3
1,990,967	-				-0.7
1,990,982	+				+1.5
1,990,989	-				+0.5
1,990,990	-				-1.5
1,990,990	-				+1.5
1,990,990	-				-0.1
1,991,413	+				-1.1
1,991,438	+				-1.4
1,991,467	+				-1.1
1,991,475	-				+1.5
1,991,477	+				+0.9
1,991,482	+				-2.1
1,991,503	-				+0.3
1,991,526	+				+1.4
1,991,526	+				+1.7
1,991,534	-				+0.4
1,991,544	-				+0.7
1,991,567	-	sppA	Synpcc7942_1916	0.12	+0.7
1,991,594	+	sppA	Synpcc7942_1916	0.15	+0.3
1,991,602	-	sppA	Synpcc7942_1916	0.16	-0.2
1,991,625	+	sppA	Synpcc7942_1916	0.19	-1.4
1,991,638	+	sppA	Synpcc7942_1916	0.21	+2.9
1,991,670	-	sppA	Synpcc7942_1916	0.25	-0.6
1,991,681	+	sppA	Synpcc7942_1916	0.26	-1.7
1,991,681	+	sppA	Synpcc7942_1916	0.26	-1.5
1,991,681	+	sppA	Synpcc7942_1916	0.26	-2.7
1,991,689	-	sppA	Synpcc7942_1916	0.27	-3.4
1,991,689	-	sppA	Synpcc7942_1916	0.27	-3.4
1,991,767	+	sppA	Synpcc7942_1916	0.37	-1.7
1,991,784	+	sppA	Synpcc7942_1916	0.39	-2.1
1,991,794	-	sppA	Synpcc7942_1916	0.40	-2.9